EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000009647 (Gene tree)
Gene ID: -
Gene Symbol: LSM12
Alias: FLJ30656
Full Name: LSM12 homolog
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 15589 bases
Position: chrAVPZ01000644.1:9513954-9529542
Accession: 26407
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000007805	AD	PF09793.9	1.2e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000011501	LSM12-201	552	-	ENSCAPP00000007805	183 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000009647's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000009647's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000009647	LSM12	89	94.444	ENSG00000161654	LSM12	83	94.444	Homo_sapiens
ENSCAPG00000009647	LSM12	89	82.099	ENSAPOG00000007907	lsm12b	83	82.099	Acanthochromis_polyacanthus
ENSCAPG00000009647	LSM12	87	96.875	ENSAMEG00000018321	LSM12	81	96.875	Ailuropoda_melanoleuca
ENSCAPG00000009647	LSM12	89	80.247	ENSACIG00000008538	lsm12b	83	80.247	Amphilophus_citrinellus
ENSCAPG00000009647	LSM12	89	81.481	ENSAOCG00000021847	lsm12b	72	81.481	Amphiprion_ocellaris
ENSCAPG00000009647	LSM12	89	81.481	ENSAPEG00000002252	lsm12b	83	81.481	Amphiprion_percula
ENSCAPG00000009647	LSM12	89	81.481	ENSATEG00000005705	lsm12b	83	81.481	Anabas_testudineus
ENSCAPG00000009647	LSM12	89	89.506	ENSACAG00000004618	LSM12	84	89.506	Anolis_carolinensis
ENSCAPG00000009647	LSM12	89	94.444	ENSANAG00000029011	LSM12	83	94.444	Aotus_nancymaae
ENSCAPG00000009647	LSM12	89	80.864	ENSACLG00000026332	lsm12b	83	80.864	Astatotilapia_calliptera
ENSCAPG00000009647	LSM12	89	80.864	ENSAMXG00000032952	lsm12b	83	80.864	Astyanax_mexicanus
ENSCAPG00000009647	LSM12	89	76.543	ENSAMXG00000036117	lsm12a	75	76.543	Astyanax_mexicanus
ENSCAPG00000009647	LSM12	89	94.444	ENSBTAG00000016252	LSM12	83	94.444	Bos_taurus
ENSCAPG00000009647	LSM12	89	94.444	ENSCJAG00000048480	LSM12	83	94.444	Callithrix_jacchus
ENSCAPG00000009647	LSM12	89	94.444	ENSCAFG00000014379	LSM12	76	94.444	Canis_familiaris
ENSCAPG00000009647	LSM12	89	94.444	ENSCAFG00020012173	LSM12	83	94.444	Canis_lupus_dingo
ENSCAPG00000009647	LSM12	89	94.444	ENSCHIG00000018175	LSM12	83	94.444	Capra_hircus
ENSCAPG00000009647	LSM12	89	94.444	ENSTSYG00000036361	LSM12	83	94.444	Carlito_syrichta
ENSCAPG00000009647	LSM12	89	95.679	ENSCPOG00000012860	LSM12	80	100.000	Cavia_porcellus
ENSCAPG00000009647	LSM12	89	94.444	ENSCCAG00000032905	LSM12	83	94.444	Cebus_capucinus
ENSCAPG00000009647	LSM12	89	94.444	ENSCATG00000030577	-	83	94.444	Cercocebus_atys
ENSCAPG00000009647	LSM12	89	95.679	ENSCLAG00000015759	LSM12	81	98.198	Chinchilla_lanigera
ENSCAPG00000009647	LSM12	89	93.827	ENSCSAG00000003486	LSM12	83	93.827	Chlorocebus_sabaeus
ENSCAPG00000009647	LSM12	60	97.248	ENSCHOG00000001198	LSM12	100	97.248	Choloepus_hoffmanni
ENSCAPG00000009647	LSM12	89	88.889	ENSCPBG00000027105	LSM12	84	88.889	Chrysemys_picta_bellii
ENSCAPG00000009647	LSM12	89	94.444	ENSCANG00000043328	LSM12	83	94.444	Colobus_angolensis_palliatus
ENSCAPG00000009647	LSM12	89	94.444	ENSCGRG00001002094	Lsm12	83	94.444	Cricetulus_griseus_chok1gshd
ENSCAPG00000009647	LSM12	91	93.413	ENSCGRG00000004316	Lsm12	94	93.413	Cricetulus_griseus_crigri
ENSCAPG00000009647	LSM12	89	80.864	ENSCSEG00000008434	lsm12b	83	80.864	Cynoglossus_semilaevis
ENSCAPG00000009647	LSM12	89	80.864	ENSCVAG00000008755	lsm12b	83	80.864	Cyprinodon_variegatus
ENSCAPG00000009647	LSM12	89	71.605	ENSDARG00000028848	lsm12a	83	71.605	Danio_rerio
ENSCAPG00000009647	LSM12	89	81.481	ENSDARG00000109510	lsm12b	83	81.481	Danio_rerio
ENSCAPG00000009647	LSM12	89	93.827	ENSDNOG00000002418	LSM12	76	93.827	Dasypus_novemcinctus
ENSCAPG00000009647	LSM12	89	94.444	ENSDORG00000016381	Lsm12	83	94.444	Dipodomys_ordii
ENSCAPG00000009647	LSM12	89	83.333	ENSETEG00000011012	-	92	83.333	Echinops_telfairi
ENSCAPG00000009647	LSM12	89	93.827	ENSETEG00000008374	LSM12	83	93.827	Echinops_telfairi
ENSCAPG00000009647	LSM12	73	59.398	ENSEBUG00000016299	lsm12a	74	59.398	Eptatretus_burgeri
ENSCAPG00000009647	LSM12	89	94.444	ENSEASG00005010155	LSM12	83	94.444	Equus_asinus_asinus
ENSCAPG00000009647	LSM12	89	94.444	ENSECAG00000009071	LSM12	83	94.444	Equus_caballus
ENSCAPG00000009647	LSM12	84	97.386	ENSEEUG00000002419	-	100	97.386	Erinaceus_europaeus
ENSCAPG00000009647	LSM12	89	79.630	ENSELUG00000015538	lsm12b	82	74.074	Esox_lucius
ENSCAPG00000009647	LSM12	89	77.778	ENSELUG00000000256	-	83	77.778	Esox_lucius
ENSCAPG00000009647	LSM12	89	94.444	ENSFCAG00000037021	LSM12	83	94.444	Felis_catus
ENSCAPG00000009647	LSM12	81	97.973	ENSFDAG00000008954	LSM12	87	97.973	Fukomys_damarensis
ENSCAPG00000009647	LSM12	89	79.630	ENSFHEG00000019913	lsm12b	83	79.630	Fundulus_heteroclitus
ENSCAPG00000009647	LSM12	86	82.166	ENSGMOG00000015449	lsm12b	99	82.166	Gadus_morhua
ENSCAPG00000009647	LSM12	84	94.118	ENSGALG00000039803	LSM12	100	94.118	Gallus_gallus
ENSCAPG00000009647	LSM12	89	80.247	ENSGAFG00000011829	lsm12b	83	80.247	Gambusia_affinis
ENSCAPG00000009647	LSM12	86	82.803	ENSGACG00000003428	lsm12b	99	82.803	Gasterosteus_aculeatus
ENSCAPG00000009647	LSM12	89	90.123	ENSGAGG00000021965	LSM12	84	90.123	Gopherus_agassizii
ENSCAPG00000009647	LSM12	89	94.444	ENSGGOG00000010589	-	83	94.444	Gorilla_gorilla
ENSCAPG00000009647	LSM12	91	80.723	ENSHBUG00000007667	lsm12b	73	80.723	Haplochromis_burtoni
ENSCAPG00000009647	LSM12	89	94.444	ENSHGLG00000011411	LSM12	83	94.444	Heterocephalus_glaber_female
ENSCAPG00000009647	LSM12	90	92.899	ENSHGLG00100000241	LSM12	90	92.899	Heterocephalus_glaber_male
ENSCAPG00000009647	LSM12	89	79.630	ENSHCOG00000002094	lsm12b	83	79.630	Hippocampus_comes
ENSCAPG00000009647	LSM12	89	81.481	ENSIPUG00000014800	lsm12	83	81.481	Ictalurus_punctatus
ENSCAPG00000009647	LSM12	87	71.875	ENSIPUG00000008936	lsm12a	82	71.875	Ictalurus_punctatus
ENSCAPG00000009647	LSM12	89	94.444	ENSSTOG00000007403	LSM12	83	94.444	Ictidomys_tridecemlineatus
ENSCAPG00000009647	LSM12	86	84.810	ENSJJAG00000011793	-	83	84.810	Jaculus_jaculus
ENSCAPG00000009647	LSM12	69	85.039	ENSJJAG00000014652	-	75	85.039	Jaculus_jaculus
ENSCAPG00000009647	LSM12	89	93.210	ENSJJAG00000004364	-	81	95.495	Jaculus_jaculus
ENSCAPG00000009647	LSM12	89	81.481	ENSLBEG00000027999	lsm12b	83	81.481	Labrus_bergylta
ENSCAPG00000009647	LSM12	89	87.037	ENSLACG00000015981	LSM12	84	87.037	Latimeria_chalumnae
ENSCAPG00000009647	LSM12	89	79.630	ENSLOCG00000013079	lsm12b	82	79.630	Lepisosteus_oculatus
ENSCAPG00000009647	LSM12	89	94.444	ENSLAFG00000005202	LSM12	83	94.444	Loxodonta_africana
ENSCAPG00000009647	LSM12	89	94.444	ENSMFAG00000031376	LSM12	83	94.444	Macaca_fascicularis
ENSCAPG00000009647	LSM12	89	94.444	ENSMMUG00000006804	LSM12	83	94.444	Macaca_mulatta
ENSCAPG00000009647	LSM12	89	94.444	ENSMNEG00000030594	-	83	94.444	Macaca_nemestrina
ENSCAPG00000009647	LSM12	89	94.444	ENSMLEG00000039934	LSM12	83	94.444	Mandrillus_leucophaeus
ENSCAPG00000009647	LSM12	89	80.864	ENSMAMG00000004279	lsm12b	83	80.864	Mastacembelus_armatus
ENSCAPG00000009647	LSM12	89	80.864	ENSMZEG00005005754	lsm12b	83	80.864	Maylandia_zebra
ENSCAPG00000009647	LSM12	89	93.827	ENSMICG00000037219	LSM12	83	93.827	Microcebus_murinus
ENSCAPG00000009647	LSM12	89	77.160	ENSMOCG00000017015	-	71	77.160	Microtus_ochrogaster
ENSCAPG00000009647	LSM12	89	94.444	ENSMOCG00000019878	-	83	94.444	Microtus_ochrogaster
ENSCAPG00000009647	LSM12	89	80.864	ENSMMOG00000020848	lsm12b	83	80.864	Mola_mola
ENSCAPG00000009647	LSM12	89	81.481	ENSMALG00000007578	lsm12b	83	81.481	Monopterus_albus
ENSCAPG00000009647	LSM12	89	93.827	MGP_CAROLIEiJ_G0017241	Lsm12	83	93.827	Mus_caroli
ENSCAPG00000009647	LSM12	89	94.444	ENSMUSG00000020922	Lsm12	83	94.444	Mus_musculus
ENSCAPG00000009647	LSM12	89	85.475	MGP_PahariEiJ_G0018371	Lsm12	81	96.396	Mus_pahari
ENSCAPG00000009647	LSM12	89	93.827	MGP_SPRETEiJ_G0018084	Lsm12	79	98.148	Mus_spretus
ENSCAPG00000009647	LSM12	89	93.827	ENSMLUG00000006391	LSM12	83	93.827	Myotis_lucifugus
ENSCAPG00000009647	LSM12	89	94.444	ENSNGAG00000001870	Lsm12	83	94.444	Nannospalax_galili
ENSCAPG00000009647	LSM12	83	73.510	ENSNGAG00000015429	-	77	73.510	Nannospalax_galili
ENSCAPG00000009647	LSM12	89	80.864	ENSNBRG00000006266	lsm12b	83	80.864	Neolamprologus_brichardi
ENSCAPG00000009647	LSM12	89	94.444	ENSNLEG00000005580	-	83	94.444	Nomascus_leucogenys
ENSCAPG00000009647	LSM12	72	92.424	ENSMEUG00000007501	-	80	92.424	Notamacropus_eugenii
ENSCAPG00000009647	LSM12	89	94.444	ENSOPRG00000008552	LSM12	83	94.444	Ochotona_princeps
ENSCAPG00000009647	LSM12	89	94.444	ENSODEG00000017998	-	83	94.444	Octodon_degus
ENSCAPG00000009647	LSM12	89	84.568	ENSODEG00000007886	-	62	84.568	Octodon_degus
ENSCAPG00000009647	LSM12	89	80.864	ENSONIG00000007933	lsm12b	83	80.864	Oreochromis_niloticus
ENSCAPG00000009647	LSM12	88	86.957	ENSOCUG00000024823	-	83	86.957	Oryctolagus_cuniculus
ENSCAPG00000009647	LSM12	87	96.875	ENSOCUG00000008566	-	81	96.875	Oryctolagus_cuniculus
ENSCAPG00000009647	LSM12	88	88.199	ENSOCUG00000021254	-	83	88.199	Oryctolagus_cuniculus
ENSCAPG00000009647	LSM12	88	89.441	ENSOCUG00000027889	-	83	89.441	Oryctolagus_cuniculus
ENSCAPG00000009647	LSM12	89	81.481	ENSORLG00000011310	lsm12b	83	81.481	Oryzias_latipes
ENSCAPG00000009647	LSM12	89	81.481	ENSORLG00020002060	lsm12b	76	81.481	Oryzias_latipes_hni
ENSCAPG00000009647	LSM12	89	81.481	ENSORLG00015001647	lsm12b	76	81.481	Oryzias_latipes_hsok
ENSCAPG00000009647	LSM12	89	81.481	ENSOMEG00000006184	lsm12b	76	81.481	Oryzias_melastigma
ENSCAPG00000009647	LSM12	89	93.827	ENSOGAG00000010489	LSM12	83	93.827	Otolemur_garnettii
ENSCAPG00000009647	LSM12	96	89.773	ENSOARG00000006589	LSM12	86	89.773	Ovis_aries
ENSCAPG00000009647	LSM12	84	98.693	ENSPPAG00000034974	-	83	98.693	Pan_paniscus
ENSCAPG00000009647	LSM12	89	94.444	ENSPPRG00000023420	LSM12	83	94.444	Panthera_pardus
ENSCAPG00000009647	LSM12	84	98.693	ENSPTIG00000012704	-	82	98.693	Panthera_tigris_altaica
ENSCAPG00000009647	LSM12	61	94.595	ENSPTIG00000014850	-	81	94.595	Panthera_tigris_altaica
ENSCAPG00000009647	LSM12	89	94.444	ENSPTRG00000009261	LSM12	83	94.444	Pan_troglodytes
ENSCAPG00000009647	LSM12	89	94.444	ENSPANG00000021315	-	83	94.444	Papio_anubis
ENSCAPG00000009647	LSM12	84	75.974	ENSPKIG00000017932	-	79	75.974	Paramormyrops_kingsleyae
ENSCAPG00000009647	LSM12	89	81.481	ENSPKIG00000021058	lsm12b	83	81.481	Paramormyrops_kingsleyae
ENSCAPG00000009647	LSM12	89	81.481	ENSPMGG00000021344	lsm12b	83	81.481	Periophthalmus_magnuspinnatus
ENSCAPG00000009647	LSM12	89	94.444	ENSPEMG00000012199	Lsm12	83	94.444	Peromyscus_maniculatus_bairdii
ENSCAPG00000009647	LSM12	77	62.411	ENSPMAG00000005461	lsm12a	81	62.411	Petromyzon_marinus
ENSCAPG00000009647	LSM12	89	91.975	ENSPCIG00000020244	LSM12	83	91.975	Phascolarctos_cinereus
ENSCAPG00000009647	LSM12	89	79.012	ENSPFOG00000015930	lsm12b	83	79.012	Poecilia_formosa
ENSCAPG00000009647	LSM12	89	79.012	ENSPLAG00000021089	lsm12b	83	79.012	Poecilia_latipinna
ENSCAPG00000009647	LSM12	89	79.012	ENSPMEG00000012961	lsm12b	83	79.012	Poecilia_mexicana
ENSCAPG00000009647	LSM12	89	80.247	ENSPREG00000010236	lsm12b	90	80.247	Poecilia_reticulata
ENSCAPG00000009647	LSM12	89	94.444	ENSPPYG00000008344	LSM12	83	94.444	Pongo_abelii
ENSCAPG00000009647	LSM12	72	94.697	ENSPCAG00000008790	LSM12	83	94.697	Procavia_capensis
ENSCAPG00000009647	LSM12	89	94.444	ENSPCOG00000027951	LSM12	83	94.444	Propithecus_coquereli
ENSCAPG00000009647	LSM12	89	93.827	ENSPVAG00000013706	LSM12	83	93.827	Pteropus_vampyrus
ENSCAPG00000009647	LSM12	89	80.864	ENSPNYG00000003386	lsm12b	83	80.864	Pundamilia_nyererei
ENSCAPG00000009647	LSM12	89	75.309	ENSPNAG00000018435	lsm12a	83	75.309	Pygocentrus_nattereri
ENSCAPG00000009647	LSM12	89	79.012	ENSPNAG00000004186	lsm12b	83	79.012	Pygocentrus_nattereri
ENSCAPG00000009647	LSM12	89	94.444	ENSRNOG00000020894	Lsm12	83	94.444	Rattus_norvegicus
ENSCAPG00000009647	LSM12	89	94.444	ENSRBIG00000027910	LSM12	83	94.444	Rhinopithecus_bieti
ENSCAPG00000009647	LSM12	89	94.444	ENSRROG00000045530	-	83	94.444	Rhinopithecus_roxellana
ENSCAPG00000009647	LSM12	63	81.034	ENSRROG00000000537	-	80	81.034	Rhinopithecus_roxellana
ENSCAPG00000009647	LSM12	78	30.573	YHR121W	-	82	30.573	Saccharomyces_cerevisiae
ENSCAPG00000009647	LSM12	89	94.444	ENSSBOG00000025310	LSM12	83	94.444	Saimiri_boliviensis_boliviensis
ENSCAPG00000009647	LSM12	84	96.104	ENSSHAG00000014914	LSM12	97	96.104	Sarcophilus_harrisii
ENSCAPG00000009647	LSM12	89	80.247	ENSSFOG00015020392	lsm12a	83	80.247	Scleropages_formosus
ENSCAPG00000009647	LSM12	89	82.716	ENSSFOG00015009612	lsm12	83	82.716	Scleropages_formosus
ENSCAPG00000009647	LSM12	89	81.481	ENSSMAG00000008089	lsm12b	83	81.481	Scophthalmus_maximus
ENSCAPG00000009647	LSM12	89	82.099	ENSSDUG00000012711	lsm12b	83	82.099	Seriola_dumerili
ENSCAPG00000009647	LSM12	89	82.099	ENSSLDG00000007404	lsm12b	83	82.099	Seriola_lalandi_dorsalis
ENSCAPG00000009647	LSM12	84	98.039	ENSSARG00000005537	LSM12	100	98.039	Sorex_araneus
ENSCAPG00000009647	LSM12	89	90.741	ENSSPUG00000011984	LSM12	84	90.741	Sphenodon_punctatus
ENSCAPG00000009647	LSM12	89	81.481	ENSSPAG00000017058	lsm12b	83	81.481	Stegastes_partitus
ENSCAPG00000009647	LSM12	89	94.444	ENSSSCG00000032394	LSM12	83	94.444	Sus_scrofa
ENSCAPG00000009647	LSM12	89	79.630	ENSTRUG00000007121	lsm12b	83	79.630	Takifugu_rubripes
ENSCAPG00000009647	LSM12	89	80.247	ENSTNIG00000014436	lsm12b	83	80.247	Tetraodon_nigroviridis
ENSCAPG00000009647	LSM12	89	90.123	ENSTBEG00000012392	-	83	90.123	Tupaia_belangeri
ENSCAPG00000009647	LSM12	89	93.827	ENSTBEG00000012523	-	83	93.827	Tupaia_belangeri
ENSCAPG00000009647	LSM12	89	94.444	ENSTTRG00000010433	LSM12	83	94.444	Tursiops_truncatus
ENSCAPG00000009647	LSM12	86	98.089	ENSUAMG00000006313	LSM12	98	98.089	Ursus_americanus
ENSCAPG00000009647	LSM12	92	90.341	ENSUMAG00000012987	LSM12	100	90.341	Ursus_maritimus
ENSCAPG00000009647	LSM12	89	87.654	ENSVPAG00000011145	LSM12	83	87.654	Vicugna_pacos
ENSCAPG00000009647	LSM12	89	94.444	ENSVVUG00000017581	LSM12	83	94.444	Vulpes_vulpes
ENSCAPG00000009647	LSM12	80	65.753	ENSXETG00000003371	lsm12	72	65.753	Xenopus_tropicalis
ENSCAPG00000009647	LSM12	89	80.247	ENSXCOG00000003994	lsm12b	83	80.247	Xiphophorus_couchianus
ENSCAPG00000009647	LSM12	89	80.247	ENSXMAG00000020950	lsm12b	83	80.247	Xiphophorus_maculatus