EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000009739 (Gene tree)
Gene ID: -
Gene Symbol: LSM11
Alias: FLJ38273
Full Name: LSM11%2C U7 small nuclear RNA associated
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 2739 bases
Position: chrAVPZ01000089.1:4929169-4931907
Accession: 30860
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000007929	LSM	PF01423.22	3.3e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000011628	LSM11-201	633	-	ENSCAPP00000007929	210 (aa)	-	UPI0000F66FEE

Gene Model

Click here to download ENSCAPG00000009739's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000009739's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000009739	LSM11	100	100.000	ENSCPOG00000000906	LSM11	99	100.000	Cavia_porcellus
ENSCAPG00000009739	LSM11	100	98.571	ENSCLAG00000017067	LSM11	90	98.571	Chinchilla_lanigera
ENSCAPG00000009739	LSM11	100	94.762	ENSCHOG00000010946	LSM11	100	94.762	Choloepus_hoffmanni
ENSCAPG00000009739	LSM11	100	97.619	ENSCANG00000040781	LSM11	100	97.619	Colobus_angolensis_palliatus
ENSCAPG00000009739	LSM11	100	98.095	ENSCGRG00000000197	Lsm11	95	98.095	Cricetulus_griseus_crigri
ENSCAPG00000009739	LSM11	100	97.143	ENSEEUG00000010814	LSM11	100	97.143	Erinaceus_europaeus
ENSCAPG00000009739	LSM11	100	97.619	ENSMLEG00000027420	LSM11	100	97.619	Mandrillus_leucophaeus
ENSCAPG00000009739	LSM11	99	40.580	ENSMMOG00000009365	lsm11	50	40.097	Mola_mola
ENSCAPG00000009739	LSM11	100	71.905	ENSMLUG00000015930	LSM11	95	71.905	Myotis_lucifugus
ENSCAPG00000009739	LSM11	100	97.619	ENSOGAG00000009059	LSM11	99	97.619	Otolemur_garnettii
ENSCAPG00000009739	LSM11	100	62.212	ENSPSIG00000005234	LSM11	99	59.447	Pelodiscus_sinensis
ENSCAPG00000009739	LSM11	100	95.238	ENSPCAG00000016360	LSM11	99	95.238	Procavia_capensis
ENSCAPG00000009739	LSM11	100	98.095	ENSTBEG00000000992	LSM11	100	98.095	Tupaia_belangeri