EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAPG00000009838 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 2128 bases
Position: chrAVPZ01000478.1:12033150-12035277
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000008058	DUF2465	PF10239.9	4.4e-49	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000011757	-	426	-	ENSCAPP00000008058	142 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000009838's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000009838's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAPG00000009838	-	85	44.355	ENSCAPG00000013955	-	61	47.059

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000009838	-	99	81.560	ENSCAFG00020017778	FAM98C	99	81.560	Canis_lupus_dingo
ENSCAPG00000009838	-	100	99.296	ENSCPOG00000005585	-	100	99.296	Cavia_porcellus
ENSCAPG00000009838	-	96	93.431	ENSCLAG00000011123	-	100	93.007	Chinchilla_lanigera
ENSCAPG00000009838	-	95	80.741	ENSCSAG00000004058	FAM98C	69	80.851	Chlorocebus_sabaeus
ENSCAPG00000009838	-	82	50.427	ENSCPBG00000008728	-	55	49.640	Chrysemys_picta_bellii
ENSCAPG00000009838	-	92	40.845	ENSCSAVG00000005076	-	63	41.549	Ciona_savignyi
ENSCAPG00000009838	-	95	81.481	ENSCANG00000026868	FAM98C	70	81.560	Colobus_angolensis_palliatus
ENSCAPG00000009838	-	95	82.353	ENSCGRG00000011604	-	100	81.119	Cricetulus_griseus_crigri
ENSCAPG00000009838	-	54	48.750	ENSCVAG00000021388	-	81	48.889	Cyprinodon_variegatus
ENSCAPG00000009838	-	96	78.102	ENSDORG00000025449	-	97	78.322	Dipodomys_ordii
ENSCAPG00000009838	-	98	82.857	ENSEASG00005002574	-	98	82.857	Equus_asinus_asinus
ENSCAPG00000009838	-	96	92.701	ENSFDAG00000011093	-	99	92.308	Fukomys_damarensis
ENSCAPG00000009838	-	99	91.549	ENSHGLG00000017864	-	100	91.549	Heterocephalus_glaber_female
ENSCAPG00000009838	-	99	91.549	ENSHGLG00100017695	-	100	91.549	Heterocephalus_glaber_male
ENSCAPG00000009838	-	99	79.433	ENSLAFG00000020798	FAM98C	56	79.433	Loxodonta_africana
ENSCAPG00000009838	-	95	80.741	ENSMMUG00000020468	FAM98C	69	80.851	Macaca_mulatta
ENSCAPG00000009838	-	95	80.741	ENSMLEG00000042221	FAM98C	69	80.851	Mandrillus_leucophaeus
ENSCAPG00000009838	-	99	70.000	ENSMODG00000013175	-	56	70.000	Monodelphis_domestica
ENSCAPG00000009838	-	99	84.507	MGP_CAROLIEiJ_G0029473	Fam98c	100	84.507	Mus_caroli
ENSCAPG00000009838	-	99	84.507	ENSMUSG00000030590	Fam98c	100	84.507	Mus_musculus
ENSCAPG00000009838	-	95	83.088	MGP_PahariEiJ_G0012707	Fam98c	100	81.818	Mus_pahari
ENSCAPG00000009838	-	98	78.571	ENSMLUG00000026049	-	51	78.571	Myotis_lucifugus
ENSCAPG00000009838	-	99	90.071	ENSODEG00000015757	-	100	90.071	Octodon_degus
ENSCAPG00000009838	-	84	87.395	ENSOCUG00000021073	-	68	85.106	Oryctolagus_cuniculus
ENSCAPG00000009838	-	64	47.253	ENSORLG00015015703	-	76	48.246	Oryzias_latipes_hsok
ENSCAPG00000009838	-	87	46.032	ENSOMEG00000014478	-	80	48.201	Oryzias_melastigma
ENSCAPG00000009838	-	99	84.397	ENSPTIG00000015909	-	98	84.397	Panthera_tigris_altaica
ENSCAPG00000009838	-	89	45.736	ENSPMGG00000015340	fam98b	92	45.736	Periophthalmus_magnuspinnatus
ENSCAPG00000009838	-	99	83.803	ENSPEMG00000018935	-	100	83.803	Peromyscus_maniculatus_bairdii
ENSCAPG00000009838	-	85	44.355	ENSRROG00000001210	-	53	47.059	Rhinopithecus_roxellana
ENSCAPG00000009838	-	99	70.714	ENSSHAG00000002208	-	57	70.714	Sarcophilus_harrisii
ENSCAPG00000009838	-	97	43.262	ENSSPUG00000019102	FAM98B	54	50.000	Sphenodon_punctatus
ENSCAPG00000009838	-	99	82.270	ENSVVUG00000013061	-	99	82.270	Vulpes_vulpes