EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000009970 (Gene tree)
Gene ID: -
Gene Symbol: LSM2
Alias: C6orf28|G7b|YBL026W
Full Name: LSM2 homolog%2C U6 small nuclear RNA and mRNA degradation associated
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 443 bases
Position: chrAVPZ01000067.1:41137163-41137605
Accession: 13940
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000008228	LSM	PF01423.22	1.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000011930	LSM2-201	237	-	ENSCAPP00000008228	78 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000009970's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000009970's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000009970	LSM2	92	100.000	ENSG00000204392	LSM2	76	100.000	Homo_sapiens
ENSCAPG00000009970	LSM2	92	98.611	ENSAPOG00000017967	si:ch73-14h10.2	76	98.611	Acanthochromis_polyacanthus
ENSCAPG00000009970	LSM2	92	100.000	ENSAMEG00000006483	LSM2	77	100.000	Ailuropoda_melanoleuca
ENSCAPG00000009970	LSM2	92	98.611	ENSAOCG00000006949	si:ch73-14h10.2	60	98.611	Amphiprion_ocellaris
ENSCAPG00000009970	LSM2	92	98.611	ENSAPEG00000020375	si:ch73-14h10.2	67	98.611	Amphiprion_percula
ENSCAPG00000009970	LSM2	92	98.611	ENSATEG00000011376	si:ch73-14h10.2	76	98.611	Anabas_testudineus
ENSCAPG00000009970	LSM2	92	100.000	ENSACAG00000017281	LSM2	69	100.000	Anolis_carolinensis
ENSCAPG00000009970	LSM2	92	100.000	ENSANAG00000028372	LSM2	100	96.000	Aotus_nancymaae
ENSCAPG00000009970	LSM2	92	94.444	ENSANAG00000028033	-	77	94.444	Aotus_nancymaae
ENSCAPG00000009970	LSM2	92	98.611	ENSACLG00000024717	smx5	76	98.611	Astatotilapia_calliptera
ENSCAPG00000009970	LSM2	92	98.611	ENSAMXG00000036868	si:ch73-14h10.2	76	98.611	Astyanax_mexicanus
ENSCAPG00000009970	LSM2	92	100.000	ENSBTAG00000005634	LSM2	76	100.000	Bos_taurus
ENSCAPG00000009970	LSM2	91	80.282	WBGene00001808	gut-2	73	80.282	Caenorhabditis_elegans
ENSCAPG00000009970	LSM2	92	100.000	ENSCJAG00000040899	LSM2	76	100.000	Callithrix_jacchus
ENSCAPG00000009970	LSM2	91	98.592	ENSCAFG00020016978	-	88	98.592	Canis_lupus_dingo
ENSCAPG00000009970	LSM2	92	100.000	ENSCHIG00000016153	LSM2	77	100.000	Capra_hircus
ENSCAPG00000009970	LSM2	92	100.000	ENSTSYG00000034844	LSM2	76	100.000	Carlito_syrichta
ENSCAPG00000009970	LSM2	91	85.915	ENSTSYG00000030015	-	90	85.915	Carlito_syrichta
ENSCAPG00000009970	LSM2	92	100.000	ENSCPOG00000021053	LSM2	76	100.000	Cavia_porcellus
ENSCAPG00000009970	LSM2	92	100.000	ENSCCAG00000024276	LSM2	76	100.000	Cebus_capucinus
ENSCAPG00000009970	LSM2	92	100.000	ENSCATG00000013737	LSM2	76	100.000	Cercocebus_atys
ENSCAPG00000009970	LSM2	92	100.000	ENSCLAG00000008081	LSM2	76	100.000	Chinchilla_lanigera
ENSCAPG00000009970	LSM2	92	100.000	ENSCSAG00000008800	LSM2	76	100.000	Chlorocebus_sabaeus
ENSCAPG00000009970	LSM2	92	100.000	ENSCHOG00000007702	LSM2	76	100.000	Choloepus_hoffmanni
ENSCAPG00000009970	LSM2	92	94.444	ENSCING00000022677	-	76	94.444	Ciona_intestinalis
ENSCAPG00000009970	LSM2	92	100.000	ENSCANG00000039576	LSM2	76	100.000	Colobus_angolensis_palliatus
ENSCAPG00000009970	LSM2	92	100.000	ENSCGRG00001013932	Lsm2	76	100.000	Cricetulus_griseus_chok1gshd
ENSCAPG00000009970	LSM2	99	97.403	ENSCGRG00000013311	Lsm2	66	97.403	Cricetulus_griseus_crigri
ENSCAPG00000009970	LSM2	92	98.611	ENSCSEG00000002911	si:ch73-14h10.2	76	98.611	Cynoglossus_semilaevis
ENSCAPG00000009970	LSM2	92	98.611	ENSCVAG00000015394	si:ch73-14h10.2	68	98.611	Cyprinodon_variegatus
ENSCAPG00000009970	LSM2	92	98.611	ENSDARG00000070867	smx5	76	98.611	Danio_rerio
ENSCAPG00000009970	LSM2	92	100.000	ENSDNOG00000002633	LSM2	77	100.000	Dasypus_novemcinctus
ENSCAPG00000009970	LSM2	92	100.000	ENSDORG00000026571	Lsm2	76	100.000	Dipodomys_ordii
ENSCAPG00000009970	LSM2	87	95.588	FBgn0036277	CG10418	72	95.588	Drosophila_melanogaster
ENSCAPG00000009970	LSM2	92	100.000	ENSEASG00005015670	LSM2	61	100.000	Equus_asinus_asinus
ENSCAPG00000009970	LSM2	92	100.000	ENSECAG00000018791	LSM2	61	100.000	Equus_caballus
ENSCAPG00000009970	LSM2	92	100.000	ENSELUG00000008241	smx5	76	100.000	Esox_lucius
ENSCAPG00000009970	LSM2	92	100.000	ENSFCAG00000045887	LSM2	76	100.000	Felis_catus
ENSCAPG00000009970	LSM2	92	100.000	ENSFDAG00000000390	LSM2	76	100.000	Fukomys_damarensis
ENSCAPG00000009970	LSM2	94	94.667	ENSFHEG00000009619	si:ch73-14h10.2	79	94.667	Fundulus_heteroclitus
ENSCAPG00000009970	LSM2	92	98.611	ENSGMOG00000019208	si:ch73-14h10.2	77	98.611	Gadus_morhua
ENSCAPG00000009970	LSM2	92	98.611	ENSGAFG00000017286	si:ch73-14h10.2	76	98.611	Gambusia_affinis
ENSCAPG00000009970	LSM2	92	98.611	ENSGACG00000003827	si:ch73-14h10.2	76	98.611	Gasterosteus_aculeatus
ENSCAPG00000009970	LSM2	92	100.000	ENSGAGG00000012458	LSM2	76	100.000	Gopherus_agassizii
ENSCAPG00000009970	LSM2	92	100.000	ENSGGOG00000011383	LSM2	76	100.000	Gorilla_gorilla
ENSCAPG00000009970	LSM2	92	100.000	ENSHGLG00000011299	LSM2	76	100.000	Heterocephalus_glaber_female
ENSCAPG00000009970	LSM2	92	100.000	ENSHGLG00100017194	LSM2	76	100.000	Heterocephalus_glaber_male
ENSCAPG00000009970	LSM2	92	98.611	ENSHCOG00000014057	si:ch73-14h10.2	76	98.611	Hippocampus_comes
ENSCAPG00000009970	LSM2	92	98.611	ENSIPUG00000010539	lsm2	76	98.611	Ictalurus_punctatus
ENSCAPG00000009970	LSM2	92	100.000	ENSSTOG00000013144	LSM2	76	100.000	Ictidomys_tridecemlineatus
ENSCAPG00000009970	LSM2	92	72.222	ENSJJAG00000019477	-	75	72.222	Jaculus_jaculus
ENSCAPG00000009970	LSM2	92	98.611	ENSKMAG00000014909	si:ch73-14h10.2	76	98.611	Kryptolebias_marmoratus
ENSCAPG00000009970	LSM2	94	97.260	ENSLBEG00000025781	si:ch73-14h10.2	77	97.260	Labrus_bergylta
ENSCAPG00000009970	LSM2	92	98.611	ENSLACG00000015064	LSM2	76	98.611	Latimeria_chalumnae
ENSCAPG00000009970	LSM2	92	98.611	ENSLOCG00000005228	si:ch73-14h10.2	76	98.611	Lepisosteus_oculatus
ENSCAPG00000009970	LSM2	92	100.000	ENSLAFG00000016139	LSM2	77	100.000	Loxodonta_africana
ENSCAPG00000009970	LSM2	92	100.000	ENSMFAG00000001016	LSM2	76	100.000	Macaca_fascicularis
ENSCAPG00000009970	LSM2	92	84.722	ENSMMUG00000045473	-	79	84.722	Macaca_mulatta
ENSCAPG00000009970	LSM2	92	100.000	ENSMMUG00000006832	LSM2	76	100.000	Macaca_mulatta
ENSCAPG00000009970	LSM2	92	100.000	ENSMNEG00000045355	LSM2	76	100.000	Macaca_nemestrina
ENSCAPG00000009970	LSM2	92	84.722	ENSMNEG00000040973	-	88	84.722	Macaca_nemestrina
ENSCAPG00000009970	LSM2	92	100.000	ENSMLEG00000037369	-	76	100.000	Mandrillus_leucophaeus
ENSCAPG00000009970	LSM2	92	83.333	ENSMLEG00000031181	-	88	83.333	Mandrillus_leucophaeus
ENSCAPG00000009970	LSM2	92	98.611	ENSMAMG00000010053	si:ch73-14h10.2	55	98.611	Mastacembelus_armatus
ENSCAPG00000009970	LSM2	92	95.946	ENSMZEG00005008688	si:ch73-14h10.2	77	95.946	Maylandia_zebra
ENSCAPG00000009970	LSM2	92	100.000	ENSMAUG00000021966	Lsm2	76	100.000	Mesocricetus_auratus
ENSCAPG00000009970	LSM2	100	76.923	ENSMICG00000046764	-	100	76.923	Microcebus_murinus
ENSCAPG00000009970	LSM2	92	100.000	ENSMOCG00000015306	Lsm2	76	100.000	Microtus_ochrogaster
ENSCAPG00000009970	LSM2	94	97.260	ENSMMOG00000005603	si:ch73-14h10.2	78	97.260	Mola_mola
ENSCAPG00000009970	LSM2	92	98.611	ENSMODG00000015177	LSM2	76	98.611	Monodelphis_domestica
ENSCAPG00000009970	LSM2	92	98.611	ENSMALG00000016490	si:ch73-14h10.2	76	98.611	Monopterus_albus
ENSCAPG00000009970	LSM2	92	100.000	MGP_CAROLIEiJ_G0021490	Lsm2	76	100.000	Mus_caroli
ENSCAPG00000009970	LSM2	92	100.000	ENSMUSG00000007050	Lsm2	76	100.000	Mus_musculus
ENSCAPG00000009970	LSM2	92	100.000	MGP_PahariEiJ_G0020485	Lsm2	76	100.000	Mus_pahari
ENSCAPG00000009970	LSM2	92	100.000	MGP_SPRETEiJ_G0022395	Lsm2	76	100.000	Mus_spretus
ENSCAPG00000009970	LSM2	92	100.000	ENSNGAG00000003997	Lsm2	76	100.000	Nannospalax_galili
ENSCAPG00000009970	LSM2	92	98.611	ENSNBRG00000012904	si:ch73-14h10.2	83	98.611	Neolamprologus_brichardi
ENSCAPG00000009970	LSM2	92	100.000	ENSNLEG00000035542	LSM2	76	100.000	Nomascus_leucogenys
ENSCAPG00000009970	LSM2	91	98.592	ENSMEUG00000003419	LSM2	100	98.592	Notamacropus_eugenii
ENSCAPG00000009970	LSM2	92	100.000	ENSOPRG00000003668	LSM2	76	100.000	Ochotona_princeps
ENSCAPG00000009970	LSM2	92	100.000	ENSODEG00000017583	LSM2	76	100.000	Octodon_degus
ENSCAPG00000009970	LSM2	92	98.611	ENSONIG00000019321	si:ch73-14h10.2	76	98.611	Oreochromis_niloticus
ENSCAPG00000009970	LSM2	92	100.000	ENSOANG00000005398	LSM2	77	100.000	Ornithorhynchus_anatinus
ENSCAPG00000009970	LSM2	92	100.000	ENSOCUG00000002583	LSM2	76	100.000	Oryctolagus_cuniculus
ENSCAPG00000009970	LSM2	92	98.611	ENSORLG00000029858	si:ch73-14h10.2	76	98.611	Oryzias_latipes
ENSCAPG00000009970	LSM2	92	70.297	ENSORLG00015000465	si:ch73-14h10.2	81	70.297	Oryzias_latipes_hsok
ENSCAPG00000009970	LSM2	92	98.611	ENSOMEG00000002892	si:ch73-14h10.2	76	98.611	Oryzias_melastigma
ENSCAPG00000009970	LSM2	92	100.000	ENSOARG00000004575	LSM2	77	100.000	Ovis_aries
ENSCAPG00000009970	LSM2	92	86.111	ENSPPAG00000043941	-	89	86.111	Pan_paniscus
ENSCAPG00000009970	LSM2	92	100.000	ENSPPAG00000032431	LSM2	76	100.000	Pan_paniscus
ENSCAPG00000009970	LSM2	92	100.000	ENSPPRG00000015353	LSM2	76	100.000	Panthera_pardus
ENSCAPG00000009970	LSM2	92	100.000	ENSPTIG00000010303	LSM2	76	100.000	Panthera_tigris_altaica
ENSCAPG00000009970	LSM2	92	100.000	ENSPTRG00000017986	LSM2	76	100.000	Pan_troglodytes
ENSCAPG00000009970	LSM2	92	100.000	ENSPANG00000024577	LSM2	76	100.000	Papio_anubis
ENSCAPG00000009970	LSM2	92	98.611	ENSPKIG00000007028	si:ch73-14h10.2	76	98.611	Paramormyrops_kingsleyae
ENSCAPG00000009970	LSM2	92	100.000	ENSPSIG00000004458	LSM2	60	100.000	Pelodiscus_sinensis
ENSCAPG00000009970	LSM2	94	95.890	ENSPMGG00000018511	si:ch73-14h10.2	78	95.890	Periophthalmus_magnuspinnatus
ENSCAPG00000009970	LSM2	92	98.611	ENSPCIG00000018560	-	73	98.611	Phascolarctos_cinereus
ENSCAPG00000009970	LSM2	92	98.611	ENSPFOG00000001621	si:ch73-14h10.2	76	98.611	Poecilia_formosa
ENSCAPG00000009970	LSM2	92	98.611	ENSPLAG00000017165	si:ch73-14h10.2	76	98.611	Poecilia_latipinna
ENSCAPG00000009970	LSM2	92	98.611	ENSPMEG00000019574	si:ch73-14h10.2	76	98.611	Poecilia_mexicana
ENSCAPG00000009970	LSM2	94	97.260	ENSPREG00000016534	si:ch73-14h10.2	78	97.260	Poecilia_reticulata
ENSCAPG00000009970	LSM2	92	100.000	ENSPCAG00000013737	LSM2	76	100.000	Procavia_capensis
ENSCAPG00000009970	LSM2	92	100.000	ENSPCOG00000020134	LSM2	76	100.000	Propithecus_coquereli
ENSCAPG00000009970	LSM2	92	100.000	ENSPVAG00000012405	LSM2	76	100.000	Pteropus_vampyrus
ENSCAPG00000009970	LSM2	92	98.611	ENSPNYG00000019298	smx5	76	98.611	Pundamilia_nyererei
ENSCAPG00000009970	LSM2	92	98.611	ENSPNAG00000027769	si:ch73-14h10.2	76	98.611	Pygocentrus_nattereri
ENSCAPG00000009970	LSM2	92	100.000	ENSRNOG00000048725	Lsm2	76	100.000	Rattus_norvegicus
ENSCAPG00000009970	LSM2	92	100.000	ENSRBIG00000010172	LSM2	76	100.000	Rhinopithecus_bieti
ENSCAPG00000009970	LSM2	92	86.111	ENSRBIG00000011356	-	88	86.111	Rhinopithecus_bieti
ENSCAPG00000009970	LSM2	92	86.111	ENSRROG00000030708	-	88	86.111	Rhinopithecus_roxellana
ENSCAPG00000009970	LSM2	92	100.000	ENSRROG00000030345	LSM2	76	100.000	Rhinopithecus_roxellana
ENSCAPG00000009970	LSM2	91	60.563	YBL026W	LSM2	75	60.563	Saccharomyces_cerevisiae
ENSCAPG00000009970	LSM2	92	100.000	ENSSBOG00000018943	LSM2	92	98.611	Saimiri_boliviensis_boliviensis
ENSCAPG00000009970	LSM2	92	98.611	ENSSFOG00015006734	lsm2	76	98.611	Scleropages_formosus
ENSCAPG00000009970	LSM2	92	98.611	ENSSMAG00000001122	si:ch73-14h10.2	76	98.611	Scophthalmus_maximus
ENSCAPG00000009970	LSM2	92	98.611	ENSSDUG00000021605	smx5	76	98.611	Seriola_dumerili
ENSCAPG00000009970	LSM2	92	98.611	ENSSLDG00000002765	si:ch73-14h10.2	76	98.611	Seriola_lalandi_dorsalis
ENSCAPG00000009970	LSM2	92	98.611	ENSSPUG00000009631	LSM2	76	98.611	Sphenodon_punctatus
ENSCAPG00000009970	LSM2	92	98.611	ENSSPAG00000016904	si:ch73-14h10.2	76	98.611	Stegastes_partitus
ENSCAPG00000009970	LSM2	92	100.000	ENSSSCG00000039021	LSM2	76	100.000	Sus_scrofa
ENSCAPG00000009970	LSM2	94	97.260	ENSTRUG00000002093	si:ch73-14h10.2	78	97.260	Takifugu_rubripes
ENSCAPG00000009970	LSM2	56	93.182	ENSTNIG00000013770	si:ch73-14h10.2	66	93.182	Tetraodon_nigroviridis
ENSCAPG00000009970	LSM2	92	100.000	ENSTTRG00000014131	LSM2	76	100.000	Tursiops_truncatus
ENSCAPG00000009970	LSM2	92	100.000	ENSUMAG00000013425	LSM2	50	100.000	Ursus_maritimus
ENSCAPG00000009970	LSM2	92	100.000	ENSVPAG00000001761	LSM2	77	100.000	Vicugna_pacos
ENSCAPG00000009970	LSM2	92	98.611	ENSVVUG00000016264	-	89	98.611	Vulpes_vulpes
ENSCAPG00000009970	LSM2	92	98.611	ENSXETG00000024077	lsm2	76	98.611	Xenopus_tropicalis
ENSCAPG00000009970	LSM2	94	97.260	ENSXCOG00000006078	si:ch73-14h10.2	78	97.260	Xiphophorus_couchianus
ENSCAPG00000009970	LSM2	94	97.260	ENSXMAG00000028018	si:ch73-14h10.2	78	97.260	Xiphophorus_maculatus