EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAPG00000010066 (Gene tree)
Gene ID: -
Gene Symbol: DDX39B
Alias: BAT1|D6S81E|UAP56
Full Name: DExD-box helicase 39B
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 8903 bases
Position: chrAVPZ01000067.1:41365673-41374575
Accession: 13917
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000008383	ResIII	PF04851.15	1.1e-07	1	1
ENSCAPP00000008383	DEAD	PF00270.29	1e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000012087	DDX39B-201	1287	-	ENSCAPP00000008383	428 (aa)	-	UPI00022B78AB

Gene Model

Click here to download ENSCAPG00000010066's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000010066's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAPG00000010066	DDX39B	82	36.544	ENSCAPG00000000964	EIF4A3	90	36.544
ENSCAPG00000010066	DDX39B	71	32.692	ENSCAPG00000008100	-	91	32.692
ENSCAPG00000010066	DDX39B	100	90.888	ENSCAPG00000010901	DDX39A	100	91.121
ENSCAPG00000010066	DDX39B	91	31.579	ENSCAPG00000015352	DDX25	93	30.787
ENSCAPG00000010066	DDX39B	62	35.821	ENSCAPG00000012540	EIF4A1	93	35.821
ENSCAPG00000010066	DDX39B	78	33.041	ENSCAPG00000012222	DDX49	73	33.041
ENSCAPG00000010066	DDX39B	91	32.080	ENSCAPG00000000183	DDX19A	85	32.080

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000010066	DDX39B	100	99.766	ENSG00000198563	DDX39B	100	100.000	Homo_sapiens
ENSCAPG00000010066	DDX39B	100	99.533	ENSAMEG00000009508	DDX39B	99	99.533	Ailuropoda_melanoleuca
ENSCAPG00000010066	DDX39B	99	93.443	ENSACIG00000004534	ddx39b	98	93.443	Amphilophus_citrinellus
ENSCAPG00000010066	DDX39B	100	92.593	ENSATEG00000012366	ddx39b	100	92.593	Anabas_testudineus
ENSCAPG00000010066	DDX39B	100	96.970	ENSACAG00000012240	DDX39B	100	96.970	Anolis_carolinensis
ENSCAPG00000010066	DDX39B	100	99.766	ENSANAG00000030372	DDX39B	100	99.766	Aotus_nancymaae
ENSCAPG00000010066	DDX39B	99	90.553	ENSACLG00000018759	ddx39b	99	90.553	Astatotilapia_calliptera
ENSCAPG00000010066	DDX39B	100	92.202	ENSAMXG00000017837	ddx39b	100	92.202	Astyanax_mexicanus
ENSCAPG00000010066	DDX39B	100	99.533	ENSBTAG00000014490	DDX39B	100	99.533	Bos_taurus
ENSCAPG00000010066	DDX39B	100	99.766	ENSCJAG00000003152	DDX39B	100	99.766	Callithrix_jacchus
ENSCAPG00000010066	DDX39B	100	99.299	ENSCAFG00000000509	DDX39B	100	99.677	Canis_familiaris
ENSCAPG00000010066	DDX39B	100	99.299	ENSCAFG00020020530	DDX39B	100	99.299	Canis_lupus_dingo
ENSCAPG00000010066	DDX39B	100	99.533	ENSCHIG00000004579	DDX39B	100	99.533	Capra_hircus
ENSCAPG00000010066	DDX39B	100	99.766	ENSTSYG00000010226	-	100	99.766	Carlito_syrichta
ENSCAPG00000010066	DDX39B	100	85.047	ENSTSYG00000029741	-	91	88.095	Carlito_syrichta
ENSCAPG00000010066	DDX39B	100	100.000	ENSCPOG00000002335	DDX39B	100	100.000	Cavia_porcellus
ENSCAPG00000010066	DDX39B	100	99.766	ENSCCAG00000027897	DDX39B	100	99.766	Cebus_capucinus
ENSCAPG00000010066	DDX39B	99	90.118	ENSCATG00000043709	DDX39B	99	90.118	Cercocebus_atys
ENSCAPG00000010066	DDX39B	100	100.000	ENSCLAG00000014555	DDX39B	100	100.000	Chinchilla_lanigera
ENSCAPG00000010066	DDX39B	99	99.529	ENSCSAG00000008517	DDX39B	100	99.529	Chlorocebus_sabaeus
ENSCAPG00000010066	DDX39B	64	99.634	ENSCPBG00000014671	-	100	99.634	Chrysemys_picta_bellii
ENSCAPG00000010066	DDX39B	100	99.766	ENSCANG00000041217	DDX39B	100	99.766	Colobus_angolensis_palliatus
ENSCAPG00000010066	DDX39B	83	84.358	ENSCGRG00001021916	-	89	84.358	Cricetulus_griseus_chok1gshd
ENSCAPG00000010066	DDX39B	57	98.776	ENSCGRG00001017315	-	95	99.029	Cricetulus_griseus_chok1gshd
ENSCAPG00000010066	DDX39B	57	98.776	ENSCGRG00000012479	-	76	98.776	Cricetulus_griseus_crigri
ENSCAPG00000010066	DDX39B	100	91.954	ENSDARG00000036069	ddx39b	100	92.184	Danio_rerio
ENSCAPG00000010066	DDX39B	100	99.766	ENSDNOG00000010215	DDX39B	100	99.766	Dasypus_novemcinctus
ENSCAPG00000010066	DDX39B	87	99.465	ENSDORG00000004985	Ddx39b	100	99.465	Dipodomys_ordii
ENSCAPG00000010066	DDX39B	87	86.631	ENSETEG00000009649	DDX39B	87	86.631	Echinops_telfairi
ENSCAPG00000010066	DDX39B	100	99.766	ENSEASG00005017156	DDX39B	100	99.766	Equus_asinus_asinus
ENSCAPG00000010066	DDX39B	100	99.766	ENSECAG00000007750	DDX39B	100	99.766	Equus_caballus
ENSCAPG00000010066	DDX39B	100	92.111	ENSELUG00000017904	ddx39b	100	92.111	Esox_lucius
ENSCAPG00000010066	DDX39B	100	99.533	ENSFCAG00000004497	DDX39B	100	99.533	Felis_catus
ENSCAPG00000010066	DDX39B	100	100.000	ENSFDAG00000011074	DDX39B	100	100.000	Fukomys_damarensis
ENSCAPG00000010066	DDX39B	74	99.367	ENSGAGG00000001300	-	80	99.367	Gopherus_agassizii
ENSCAPG00000010066	DDX39B	100	99.766	ENSGGOG00000005989	DDX39B	100	99.766	Gorilla_gorilla
ENSCAPG00000010066	DDX39B	100	99.533	ENSHGLG00000019248	DDX39B	100	99.533	Heterocephalus_glaber_female
ENSCAPG00000010066	DDX39B	100	99.533	ENSHGLG00100011850	DDX39B	100	99.533	Heterocephalus_glaber_male
ENSCAPG00000010066	DDX39B	100	91.055	ENSIPUG00000015733	DDX39B	94	91.514	Ictalurus_punctatus
ENSCAPG00000010066	DDX39B	100	99.766	ENSSTOG00000012838	DDX39B	100	99.766	Ictidomys_tridecemlineatus
ENSCAPG00000010066	DDX39B	100	99.065	ENSJJAG00000005660	-	100	99.065	Jaculus_jaculus
ENSCAPG00000010066	DDX39B	99	78.251	ENSLBEG00000012254	ddx39b	99	78.220	Labrus_bergylta
ENSCAPG00000010066	DDX39B	66	79.078	ENSLBEG00000017177	-	85	75.102	Labrus_bergylta
ENSCAPG00000010066	DDX39B	100	89.631	ENSLACG00000002110	DDX39B	100	89.631	Latimeria_chalumnae
ENSCAPG00000010066	DDX39B	100	99.533	ENSLAFG00000014202	DDX39B	100	99.533	Loxodonta_africana
ENSCAPG00000010066	DDX39B	100	99.766	ENSMFAG00000034233	DDX39B	100	99.766	Macaca_fascicularis
ENSCAPG00000010066	DDX39B	100	99.766	ENSMMUG00000008839	DDX39B	100	99.766	Macaca_mulatta
ENSCAPG00000010066	DDX39B	100	99.766	ENSMNEG00000041059	DDX39B	100	99.766	Macaca_nemestrina
ENSCAPG00000010066	DDX39B	100	99.766	ENSMLEG00000043791	DDX39B	100	99.766	Mandrillus_leucophaeus
ENSCAPG00000010066	DDX39B	99	90.553	ENSMZEG00005017654	ddx39b	99	90.553	Maylandia_zebra
ENSCAPG00000010066	DDX39B	100	99.065	ENSMAUG00000008059	Ddx39b	100	99.065	Mesocricetus_auratus
ENSCAPG00000010066	DDX39B	100	99.766	ENSMICG00000017349	DDX39B	100	99.766	Microcebus_murinus
ENSCAPG00000010066	DDX39B	100	99.299	ENSMOCG00000011169	Ddx39b	100	99.299	Microtus_ochrogaster
ENSCAPG00000010066	DDX39B	88	99.468	ENSMODG00000015791	DDX39B	88	99.468	Monodelphis_domestica
ENSCAPG00000010066	DDX39B	100	99.299	ENSMUSG00000019432	Ddx39b	100	100.000	Mus_musculus
ENSCAPG00000010066	DDX39B	100	99.299	MGP_PahariEiJ_G0020513	Ddx39b	100	100.000	Mus_pahari
ENSCAPG00000010066	DDX39B	100	99.299	MGP_SPRETEiJ_G0022424	Ddx39b	100	99.299	Mus_spretus
ENSCAPG00000010066	DDX39B	100	99.533	ENSMPUG00000011407	DDX39B	100	99.533	Mustela_putorius_furo
ENSCAPG00000010066	DDX39B	73	99.678	ENSMLUG00000001681	DDX39B	100	99.678	Myotis_lucifugus
ENSCAPG00000010066	DDX39B	100	99.766	ENSNGAG00000022948	Ddx39b	100	99.766	Nannospalax_galili
ENSCAPG00000010066	DDX39B	100	75.234	ENSNLEG00000006094	DDX39B	100	75.234	Nomascus_leucogenys
ENSCAPG00000010066	DDX39B	86	99.550	ENSMEUG00000008264	DDX39B	86	99.550	Notamacropus_eugenii
ENSCAPG00000010066	DDX39B	100	99.533	ENSOPRG00000011923	DDX39B	100	99.533	Ochotona_princeps
ENSCAPG00000010066	DDX39B	100	99.766	ENSODEG00000018083	DDX39B	100	99.766	Octodon_degus
ENSCAPG00000010066	DDX39B	100	91.667	ENSONIG00000004740	ddx39b	100	91.667	Oreochromis_niloticus
ENSCAPG00000010066	DDX39B	55	98.734	ENSOANG00000008361	DDX39B	95	98.734	Ornithorhynchus_anatinus
ENSCAPG00000010066	DDX39B	100	95.937	ENSOCUG00000024126	DDX39B	100	95.937	Oryctolagus_cuniculus
ENSCAPG00000010066	DDX39B	84	91.444	ENSOGAG00000009067	-	100	98.148	Otolemur_garnettii
ENSCAPG00000010066	DDX39B	100	98.368	ENSOGAG00000028850	-	100	98.368	Otolemur_garnettii
ENSCAPG00000010066	DDX39B	100	99.533	ENSOARG00000008787	DDX39B	98	99.533	Ovis_aries
ENSCAPG00000010066	DDX39B	100	99.766	ENSPPAG00000043072	DDX39B	100	99.766	Pan_paniscus
ENSCAPG00000010066	DDX39B	100	99.533	ENSPPRG00000001913	DDX39B	100	99.533	Panthera_pardus
ENSCAPG00000010066	DDX39B	100	98.598	ENSPTIG00000017669	DDX39B	100	98.598	Panthera_tigris_altaica
ENSCAPG00000010066	DDX39B	100	99.766	ENSPTRG00000032509	DDX39B	100	99.766	Pan_troglodytes
ENSCAPG00000010066	DDX39B	100	99.766	ENSPANG00000018609	DDX39B	100	99.766	Papio_anubis
ENSCAPG00000010066	DDX39B	100	90.618	ENSPKIG00000011324	ddx39b	100	91.304	Paramormyrops_kingsleyae
ENSCAPG00000010066	DDX39B	100	99.065	ENSPEMG00000016905	Ddx39b	100	99.065	Peromyscus_maniculatus_bairdii
ENSCAPG00000010066	DDX39B	100	99.766	ENSPCIG00000017572	DDX39B	100	99.766	Phascolarctos_cinereus
ENSCAPG00000010066	DDX39B	100	99.766	ENSPPYG00000016433	DDX39B	100	99.766	Pongo_abelii
ENSCAPG00000010066	DDX39B	66	99.296	ENSPCAG00000003484	DDX39B	100	99.296	Procavia_capensis
ENSCAPG00000010066	DDX39B	100	99.766	ENSPCOG00000018656	DDX39B	100	99.766	Propithecus_coquereli
ENSCAPG00000010066	DDX39B	100	99.299	ENSPVAG00000004653	DDX39B	100	99.299	Pteropus_vampyrus
ENSCAPG00000010066	DDX39B	98	82.547	ENSPNYG00000010382	ddx39b	98	82.670	Pundamilia_nyererei
ENSCAPG00000010066	DDX39B	100	91.972	ENSPNAG00000026926	ddx39b	100	91.972	Pygocentrus_nattereri
ENSCAPG00000010066	DDX39B	100	99.299	ENSRNOG00000000841	Ddx39b	100	99.299	Rattus_norvegicus
ENSCAPG00000010066	DDX39B	100	89.486	ENSRBIG00000031309	DDX39B	100	89.486	Rhinopithecus_bieti
ENSCAPG00000010066	DDX39B	100	99.766	ENSRROG00000039517	DDX39B	100	99.766	Rhinopithecus_roxellana
ENSCAPG00000010066	DDX39B	100	89.486	ENSSBOG00000035513	-	100	89.486	Saimiri_boliviensis_boliviensis
ENSCAPG00000010066	DDX39B	100	99.766	ENSSHAG00000003209	DDX39B	100	99.766	Sarcophilus_harrisii
ENSCAPG00000010066	DDX39B	100	90.847	ENSSFOG00015016107	ddx39b	100	91.533	Scleropages_formosus
ENSCAPG00000010066	DDX39B	100	93.056	ENSSDUG00000011557	ddx39b	100	93.287	Seriola_dumerili
ENSCAPG00000010066	DDX39B	100	92.824	ENSSLDG00000015763	ddx39b	100	93.056	Seriola_lalandi_dorsalis
ENSCAPG00000010066	DDX39B	87	87.433	ENSSARG00000005245	DDX39B	100	87.433	Sorex_araneus
ENSCAPG00000010066	DDX39B	100	97.664	ENSSPUG00000012805	DDX39B	100	97.664	Sphenodon_punctatus
ENSCAPG00000010066	DDX39B	100	99.766	ENSSSCG00000001400	DDX39B	100	99.711	Sus_scrofa
ENSCAPG00000010066	DDX39B	100	76.869	ENSTBEG00000003721	DDX39B	100	76.869	Tupaia_belangeri
ENSCAPG00000010066	DDX39B	100	91.224	ENSTTRG00000014074	DDX39B	100	91.224	Tursiops_truncatus
ENSCAPG00000010066	DDX39B	100	86.744	ENSUAMG00000027335	DDX39B	100	86.744	Ursus_americanus
ENSCAPG00000010066	DDX39B	100	90.654	ENSUMAG00000015124	DDX39B	100	90.654	Ursus_maritimus
ENSCAPG00000010066	DDX39B	61	100.000	ENSVPAG00000009167	-	74	100.000	Vicugna_pacos
ENSCAPG00000010066	DDX39B	100	99.299	ENSVVUG00000019518	DDX39B	99	99.299	Vulpes_vulpes
ENSCAPG00000010066	DDX39B	100	83.721	ENSXETG00000002498	ddx39b	99	83.721	Xenopus_tropicalis