EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000010308 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 25948 bases
Position: chrAVPZ01000822.1:54106-80053
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000008656	G-patch	PF01585.23	2.7e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000012365	-	1761	-	ENSCAPP00000008656	586 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000010308's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000010308's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000010308	-	99	73.155	ENSG00000164252	AGGF1	89	73.155	Homo_sapiens
ENSCAPG00000010308	-	69	56.286	ENSAPOG00000003697	aggf1	70	56.857	Acanthochromis_polyacanthus
ENSCAPG00000010308	-	99	73.396	ENSAMEG00000001833	-	89	73.239	Ailuropoda_melanoleuca
ENSCAPG00000010308	-	83	48.000	ENSACIG00000016886	aggf1	80	48.496	Amphilophus_citrinellus
ENSCAPG00000010308	-	66	56.374	ENSAOCG00000003993	aggf1	70	56.657	Amphiprion_ocellaris
ENSCAPG00000010308	-	66	56.374	ENSAPEG00000003771	aggf1	70	56.657	Amphiprion_percula
ENSCAPG00000010308	-	78	48.875	ENSATEG00000023889	aggf1	78	50.305	Anabas_testudineus
ENSCAPG00000010308	-	100	55.488	ENSAPLG00000001528	-	99	55.352	Anas_platyrhynchos
ENSCAPG00000010308	-	96	55.340	ENSACAG00000007847	-	89	55.016	Anolis_carolinensis
ENSCAPG00000010308	-	99	73.783	ENSANAG00000023021	-	90	73.783	Aotus_nancymaae
ENSCAPG00000010308	-	82	45.329	ENSACLG00000010679	aggf1	72	56.145	Astatotilapia_calliptera
ENSCAPG00000010308	-	99	74.686	ENSBTAG00000034823	AGGF1	89	74.371	Bos_taurus
ENSCAPG00000010308	-	99	73.428	ENSCJAG00000019955	-	90	73.312	Callithrix_jacchus
ENSCAPG00000010308	-	99	73.155	ENSCAFG00000009268	AGGF1	90	73.155	Canis_familiaris
ENSCAPG00000010308	-	99	73.155	ENSCAFG00020025988	-	90	73.155	Canis_lupus_dingo
ENSCAPG00000010308	-	99	73.940	ENSCHIG00000012662	-	89	73.783	Capra_hircus
ENSCAPG00000010308	-	99	72.214	ENSTSYG00000012743	-	89	72.214	Carlito_syrichta
ENSCAPG00000010308	-	100	90.161	ENSCPOG00000003545	-	89	90.161	Cavia_porcellus
ENSCAPG00000010308	-	100	72.897	ENSCCAG00000023174	-	89	72.430	Cebus_capucinus
ENSCAPG00000010308	-	99	73.469	ENSCATG00000041518	-	90	73.469	Cercocebus_atys
ENSCAPG00000010308	-	100	83.280	ENSCLAG00000012928	-	89	83.280	Chinchilla_lanigera
ENSCAPG00000010308	-	99	73.312	ENSCSAG00000015324	-	90	73.312	Chlorocebus_sabaeus
ENSCAPG00000010308	-	100	58.025	ENSCPBG00000001764	-	91	56.414	Chrysemys_picta_bellii
ENSCAPG00000010308	-	99	73.469	ENSCANG00000042628	-	90	73.469	Colobus_angolensis_palliatus
ENSCAPG00000010308	-	100	69.702	ENSCGRG00001017039	Aggf1	90	70.330	Cricetulus_griseus_chok1gshd
ENSCAPG00000010308	-	100	70.283	ENSCGRG00000010170	Aggf1	98	70.440	Cricetulus_griseus_crigri
ENSCAPG00000010308	-	99	38.018	ENSCVAG00000002578	aggf1	71	55.125	Cyprinodon_variegatus
ENSCAPG00000010308	-	65	57.278	ENSDARG00000060109	aggf1	70	53.908	Danio_rerio
ENSCAPG00000010308	-	99	73.354	ENSDNOG00000018473	-	89	73.981	Dasypus_novemcinctus
ENSCAPG00000010308	-	99	69.051	ENSDORG00000005780	Aggf1	89	68.896	Dipodomys_ordii
ENSCAPG00000010308	-	79	42.222	ENSEBUG00000005188	aggf1	68	54.717	Eptatretus_burgeri
ENSCAPG00000010308	-	99	73.469	ENSEASG00005001829	-	89	73.428	Equus_asinus_asinus
ENSCAPG00000010308	-	99	73.626	ENSECAG00000016031	AGGF1	94	73.585	Equus_caballus
ENSCAPG00000010308	-	87	89.865	ENSEEUG00000008338	-	87	89.865	Erinaceus_europaeus
ENSCAPG00000010308	-	90	53.352	ENSELUG00000000226	aggf1	71	53.911	Esox_lucius
ENSCAPG00000010308	-	99	74.411	ENSFCAG00000018724	-	89	74.411	Felis_catus
ENSCAPG00000010308	-	98	56.329	ENSFALG00000010018	-	90	56.056	Ficedula_albicollis
ENSCAPG00000010308	-	99	81.129	ENSFDAG00000017381	-	88	81.129	Fukomys_damarensis
ENSCAPG00000010308	-	84	43.869	ENSFHEG00000003864	aggf1	71	54.902	Fundulus_heteroclitus
ENSCAPG00000010308	-	52	54.683	ENSGMOG00000017475	aggf1	89	40.396	Gadus_morhua
ENSCAPG00000010308	-	99	56.744	ENSGALG00000004311	-	91	57.187	Gallus_gallus
ENSCAPG00000010308	-	55	54.444	ENSGACG00000008392	aggf1	50	55.556	Gasterosteus_aculeatus
ENSCAPG00000010308	-	100	57.716	ENSGAGG00000016181	-	91	56.260	Gopherus_agassizii
ENSCAPG00000010308	-	99	73.783	ENSGGOG00000010269	-	89	73.783	Gorilla_gorilla
ENSCAPG00000010308	-	82	45.724	ENSHBUG00000022352	aggf1	71	55.866	Haplochromis_burtoni
ENSCAPG00000010308	-	99	81.129	ENSHGLG00000000455	-	88	81.129	Heterocephalus_glaber_female
ENSCAPG00000010308	-	99	81.129	ENSHGLG00100003212	-	88	81.129	Heterocephalus_glaber_male
ENSCAPG00000010308	-	99	75.039	ENSSTOG00000021590	-	89	75.039	Ictidomys_tridecemlineatus
ENSCAPG00000010308	-	99	68.700	ENSJJAG00000012003	Aggf1	88	68.700	Jaculus_jaculus
ENSCAPG00000010308	-	80	45.372	ENSKMAG00000000429	aggf1	69	57.910	Kryptolebias_marmoratus
ENSCAPG00000010308	-	79	57.911	ENSLBEG00000015145	aggf1	72	55.220	Labrus_bergylta
ENSCAPG00000010308	-	99	49.694	ENSLACG00000012448	aggf1	89	49.388	Latimeria_chalumnae
ENSCAPG00000010308	-	99	44.242	ENSLOCG00000005688	aggf1	90	45.068	Lepisosteus_oculatus
ENSCAPG00000010308	-	99	73.312	ENSMFAG00000038062	-	90	73.312	Macaca_fascicularis
ENSCAPG00000010308	-	99	73.312	ENSMMUG00000021356	AGGF1	90	73.312	Macaca_mulatta
ENSCAPG00000010308	-	99	73.312	ENSMNEG00000044235	-	90	73.312	Macaca_nemestrina
ENSCAPG00000010308	-	99	73.626	ENSMLEG00000031926	-	90	73.626	Mandrillus_leucophaeus
ENSCAPG00000010308	-	85	55.679	ENSMAMG00000018109	aggf1	71	55.679	Mastacembelus_armatus
ENSCAPG00000010308	-	82	45.745	ENSMZEG00005026920	aggf1	72	56.742	Maylandia_zebra
ENSCAPG00000010308	-	74	70.600	ENSMAUG00000012678	Aggf1	84	70.600	Mesocricetus_auratus
ENSCAPG00000010308	-	99	73.783	ENSMICG00000028679	-	89	73.783	Microcebus_murinus
ENSCAPG00000010308	-	100	70.423	ENSMOCG00000003377	Aggf1	90	70.440	Microtus_ochrogaster
ENSCAPG00000010308	-	99	64.852	ENSMODG00000019743	-	89	64.697	Monodelphis_domestica
ENSCAPG00000010308	-	81	44.190	ENSMALG00000000629	aggf1	71	54.696	Monopterus_albus
ENSCAPG00000010308	-	100	69.279	MGP_CAROLIEiJ_G0018795	Aggf1	90	69.291	Mus_caroli
ENSCAPG00000010308	-	100	68.339	ENSMUSG00000021681	Aggf1	89	68.346	Mus_musculus
ENSCAPG00000010308	-	100	69.906	MGP_PahariEiJ_G0015872	Aggf1	90	69.921	Mus_pahari
ENSCAPG00000010308	-	100	68.809	MGP_SPRETEiJ_G0019678	Aggf1	89	68.819	Mus_spretus
ENSCAPG00000010308	-	99	73.552	ENSMPUG00000005518	-	89	73.552	Mustela_putorius_furo
ENSCAPG00000010308	-	99	73.312	ENSMLUG00000016792	-	89	73.312	Myotis_lucifugus
ENSCAPG00000010308	-	99	73.312	ENSNGAG00000008354	Aggf1	90	72.527	Nannospalax_galili
ENSCAPG00000010308	-	99	71.382	ENSNLEG00000026907	-	89	71.382	Nomascus_leucogenys
ENSCAPG00000010308	-	74	78.788	ENSMEUG00000003694	-	78	78.788	Notamacropus_eugenii
ENSCAPG00000010308	-	100	82.315	ENSODEG00000000501	-	89	82.315	Octodon_degus
ENSCAPG00000010308	-	82	47.619	ENSONIG00000019429	aggf1	91	44.136	Oreochromis_niloticus
ENSCAPG00000010308	-	100	63.553	ENSOANG00000015762	-	99	62.787	Ornithorhynchus_anatinus
ENSCAPG00000010308	-	90	63.748	ENSOCUG00000021999	-	88	63.748	Oryctolagus_cuniculus
ENSCAPG00000010308	-	63	59.360	ENSOCUG00000022939	-	99	59.113	Oryctolagus_cuniculus
ENSCAPG00000010308	-	64	57.929	ENSORLG00000016771	aggf1	72	54.749	Oryzias_latipes
ENSCAPG00000010308	-	67	58.252	ENSORLG00020012116	aggf1	71	55.028	Oryzias_latipes_hni
ENSCAPG00000010308	-	64	58.442	ENSORLG00015007137	aggf1	71	55.028	Oryzias_latipes_hsok
ENSCAPG00000010308	-	68	59.150	ENSOMEG00000007139	aggf1	72	55.742	Oryzias_melastigma
ENSCAPG00000010308	-	99	74.254	ENSOGAG00000003439	-	89	74.254	Otolemur_garnettii
ENSCAPG00000010308	-	99	74.254	ENSOARG00000016987	-	89	74.097	Ovis_aries
ENSCAPG00000010308	-	99	72.684	ENSPPAG00000035969	-	89	72.684	Pan_paniscus
ENSCAPG00000010308	-	99	74.411	ENSPPRG00000004438	-	89	74.411	Panthera_pardus
ENSCAPG00000010308	-	99	74.568	ENSPTIG00000021519	-	89	74.568	Panthera_tigris_altaica
ENSCAPG00000010308	-	99	73.155	ENSPTRG00000017008	AGGF1	89	73.155	Pan_troglodytes
ENSCAPG00000010308	-	99	73.469	ENSPANG00000026423	-	90	73.469	Papio_anubis
ENSCAPG00000010308	-	98	58.658	ENSPSIG00000014397	-	99	61.728	Pelodiscus_sinensis
ENSCAPG00000010308	-	81	43.969	ENSPMGG00000007800	aggf1	77	44.618	Periophthalmus_magnuspinnatus
ENSCAPG00000010308	-	100	70.912	ENSPEMG00000015659	Aggf1	90	70.912	Peromyscus_maniculatus_bairdii
ENSCAPG00000010308	-	83	44.059	ENSPMAG00000000248	aggf1	98	45.018	Petromyzon_marinus
ENSCAPG00000010308	-	99	65.736	ENSPCIG00000002077	-	88	65.426	Phascolarctos_cinereus
ENSCAPG00000010308	-	81	42.933	ENSPFOG00000006825	aggf1	72	55.028	Poecilia_formosa
ENSCAPG00000010308	-	81	43.110	ENSPLAG00000010884	aggf1	72	55.307	Poecilia_latipinna
ENSCAPG00000010308	-	81	42.933	ENSPMEG00000022614	aggf1	72	55.028	Poecilia_mexicana
ENSCAPG00000010308	-	83	47.500	ENSPREG00000000844	aggf1	81	48.419	Poecilia_reticulata
ENSCAPG00000010308	-	99	73.626	ENSPPYG00000015574	-	89	73.626	Pongo_abelii
ENSCAPG00000010308	-	88	84.566	ENSPCAG00000001207	-	70	84.566	Procavia_capensis
ENSCAPG00000010308	-	99	74.568	ENSPCOG00000026723	-	89	74.097	Propithecus_coquereli
ENSCAPG00000010308	-	84	72.669	ENSPVAG00000009733	-	74	72.669	Pteropus_vampyrus
ENSCAPG00000010308	-	82	45.899	ENSPNYG00000004829	aggf1	72	55.866	Pundamilia_nyererei
ENSCAPG00000010308	-	87	53.125	ENSPNAG00000020774	aggf1	69	53.125	Pygocentrus_nattereri
ENSCAPG00000010308	-	100	68.966	ENSRNOG00000029304	Aggf1	90	69.134	Rattus_norvegicus
ENSCAPG00000010308	-	99	68.446	ENSRBIG00000041741	-	89	68.446	Rhinopithecus_bieti
ENSCAPG00000010308	-	99	73.155	ENSSBOG00000019539	-	90	73.155	Saimiri_boliviensis_boliviensis
ENSCAPG00000010308	-	99	65.683	ENSSHAG00000004570	-	89	65.528	Sarcophilus_harrisii
ENSCAPG00000010308	-	96	45.199	ENSSFOG00015016459	aggf1	86	46.623	Scleropages_formosus
ENSCAPG00000010308	-	82	44.714	ENSSMAG00000008550	aggf1	73	54.545	Scophthalmus_maximus
ENSCAPG00000010308	-	79	45.554	ENSSDUG00000022810	aggf1	69	56.637	Seriola_dumerili
ENSCAPG00000010308	-	67	57.270	ENSSLDG00000019164	aggf1	66	57.864	Seriola_lalandi_dorsalis
ENSCAPG00000010308	-	95	66.942	ENSSARG00000004985	-	99	66.942	Sorex_araneus
ENSCAPG00000010308	-	99	57.674	ENSSPUG00000016142	-	91	56.899	Sphenodon_punctatus
ENSCAPG00000010308	-	99	75.196	ENSSSCG00000014094	-	89	75.039	Sus_scrofa
ENSCAPG00000010308	-	98	56.398	ENSTGUG00000004021	-	99	56.019	Taeniopygia_guttata
ENSCAPG00000010308	-	97	41.346	ENSTNIG00000011002	aggf1	89	41.602	Tetraodon_nigroviridis
ENSCAPG00000010308	-	70	57.465	ENSTBEG00000006876	-	69	57.465	Tupaia_belangeri
ENSCAPG00000010308	-	99	73.940	ENSTTRG00000009470	-	89	73.783	Tursiops_truncatus
ENSCAPG00000010308	-	99	73.981	ENSUAMG00000026527	-	89	73.824	Ursus_americanus
ENSCAPG00000010308	-	99	73.981	ENSUMAG00000005048	-	89	73.824	Ursus_maritimus
ENSCAPG00000010308	-	99	71.739	ENSVPAG00000001901	-	90	71.584	Vicugna_pacos
ENSCAPG00000010308	-	99	72.727	ENSVVUG00000025114	-	90	73.041	Vulpes_vulpes
ENSCAPG00000010308	-	97	47.611	ENSXETG00000017077	aggf1	96	65.672	Xenopus_tropicalis
ENSCAPG00000010308	-	74	49.704	ENSXCOG00000017629	aggf1	67	50.592	Xiphophorus_couchianus
ENSCAPG00000010308	-	72	53.782	ENSXMAG00000018418	aggf1	72	54.622	Xiphophorus_maculatus