EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAPG00000010404 (Gene tree)
Gene ID: -
Gene Symbol: GFI1B
Alias: ZNF163B
Full Name: growth factor independent 1B transcriptional repressor
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Minus strand
Length: 3223 bases
Position: chrAVPZ01000200.1:896762-899984
Accession: 4238
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000008790	zf-C2H2	PF00096.26	3.9e-26	1	5
ENSCAPP00000008790	zf-C2H2	PF00096.26	3.9e-26	2	5
ENSCAPP00000008790	zf-C2H2	PF00096.26	3.9e-26	3	5
ENSCAPP00000008790	zf-C2H2	PF00096.26	3.9e-26	4	5
ENSCAPP00000008790	zf-C2H2	PF00096.26	3.9e-26	5	5
ENSCAPP00000008787	zf-C2H2	PF00096.26	8.9e-26	1	4
ENSCAPP00000008787	zf-C2H2	PF00096.26	8.9e-26	2	4
ENSCAPP00000008787	zf-C2H2	PF00096.26	8.9e-26	3	4
ENSCAPP00000008787	zf-C2H2	PF00096.26	8.9e-26	4	4
ENSCAPP00000008790	zf-met	PF12874.7	1.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000012499	GFI1B-202	966	-	ENSCAPP00000008790	321 (aa)	-	-
ENSCAPT00000012496	GFI1B-201	1074	-	ENSCAPP00000008787	357 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000010404's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000010404's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAPG00000010404	GFI1B	88	37.427	ENSCAPG00000012228	ZBTB48	69	37.427
ENSCAPG00000010404	GFI1B	60	43.011	ENSCAPG00000009816	ZNF236	58	42.857
ENSCAPG00000010404	GFI1B	61	38.732	ENSCAPG00000015217	PRDM5	77	45.794
ENSCAPG00000010404	GFI1B	61	39.344	ENSCAPG00000000623	ZNF770	94	39.344
ENSCAPG00000010404	GFI1B	55	45.652	ENSCAPG00000002667	-	74	45.652
ENSCAPG00000010404	GFI1B	57	91.228	ENSCAPG00000016268	-	100	91.228
ENSCAPG00000010404	GFI1B	94	37.113	ENSCAPG00000017499	ZNF2	85	37.113
ENSCAPG00000010404	GFI1B	54	42.991	ENSCAPG00000012608	-	64	43.038
ENSCAPG00000010404	GFI1B	57	34.959	ENSCAPG00000013078	SNAI2	79	34.746
ENSCAPG00000010404	GFI1B	57	36.145	ENSCAPG00000009522	ZNF865	62	37.195
ENSCAPG00000010404	GFI1B	58	37.379	ENSCAPG00000007129	ZNF319	92	36.585
ENSCAPG00000010404	GFI1B	91	44.099	ENSCAPG00000006920	-	94	44.099
ENSCAPG00000010404	GFI1B	61	42.466	ENSCAPG00000000389	ZNF574	61	45.283
ENSCAPG00000010404	GFI1B	71	38.462	ENSCAPG00000014613	ZNF423	56	38.095
ENSCAPG00000010404	GFI1B	54	36.792	ENSCAPG00000015862	GTF3A	87	36.792
ENSCAPG00000010404	GFI1B	59	40.517	ENSCAPG00000016810	ZFP69	72	43.284
ENSCAPG00000010404	GFI1B	51	35.897	ENSCAPG00000005775	OVOL2	74	35.897
ENSCAPG00000010404	GFI1B	69	45.122	ENSCAPG00000013118	-	76	45.122
ENSCAPG00000010404	GFI1B	68	45.806	ENSCAPG00000003129	-	84	45.806

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000010404	GFI1B	100	58.610	ENSAPOG00000001296	gfi1b	100	58.610	Acanthochromis_polyacanthus
ENSCAPG00000010404	GFI1B	100	55.963	ENSACIG00000002190	gfi1b	100	55.963	Amphilophus_citrinellus
ENSCAPG00000010404	GFI1B	100	59.451	ENSAOCG00000021187	gfi1b	100	59.451	Amphiprion_ocellaris
ENSCAPG00000010404	GFI1B	100	59.819	ENSAPEG00000016196	gfi1b	100	59.819	Amphiprion_percula
ENSCAPG00000010404	GFI1B	100	58.876	ENSATEG00000002534	gfi1b	100	58.876	Anabas_testudineus
ENSCAPG00000010404	GFI1B	100	66.374	ENSAPLG00000003373	GFI1B	100	66.374	Anas_platyrhynchos
ENSCAPG00000010404	GFI1B	100	55.952	ENSACLG00000027053	gfi1b	100	55.952	Astatotilapia_calliptera
ENSCAPG00000010404	GFI1B	100	61.357	ENSAMXG00000037544	GFI1B	100	61.357	Astyanax_mexicanus
ENSCAPG00000010404	GFI1B	100	68.786	ENSCPBG00000021186	GFI1B	100	68.786	Chrysemys_picta_bellii
ENSCAPG00000010404	GFI1B	100	57.647	ENSCSEG00000001315	gfi1b	100	57.647	Cynoglossus_semilaevis
ENSCAPG00000010404	GFI1B	100	58.824	ENSCVAG00000017168	gfi1b	100	58.824	Cyprinodon_variegatus
ENSCAPG00000010404	GFI1B	100	61.128	ENSDARG00000079947	gfi1b	99	74.262	Danio_rerio
ENSCAPG00000010404	GFI1B	62	94.828	ENSEEUG00000012609	-	75	94.828	Erinaceus_europaeus
ENSCAPG00000010404	GFI1B	100	58.261	ENSELUG00000016933	gfi1b	100	58.261	Esox_lucius
ENSCAPG00000010404	GFI1B	100	63.926	ENSFALG00000001479	GFI1B	100	63.757	Ficedula_albicollis
ENSCAPG00000010404	GFI1B	100	59.036	ENSFHEG00000015138	gfi1b	100	59.036	Fundulus_heteroclitus
ENSCAPG00000010404	GFI1B	100	51.944	ENSGMOG00000019123	gfi1b	88	71.967	Gadus_morhua
ENSCAPG00000010404	GFI1B	100	67.353	ENSGALG00000003478	GFI1B	100	67.353	Gallus_gallus
ENSCAPG00000010404	GFI1B	74	70.168	ENSGAFG00000003059	gfi1b	100	70.168	Gambusia_affinis
ENSCAPG00000010404	GFI1B	100	54.674	ENSGACG00000018134	gfi1b	100	54.674	Gasterosteus_aculeatus
ENSCAPG00000010404	GFI1B	100	68.915	ENSGAGG00000021327	GFI1B	100	68.915	Gopherus_agassizii
ENSCAPG00000010404	GFI1B	100	55.952	ENSHBUG00000005451	gfi1b	100	55.952	Haplochromis_burtoni
ENSCAPG00000010404	GFI1B	100	59.756	ENSHCOG00000013713	gfi1b	100	59.756	Hippocampus_comes
ENSCAPG00000010404	GFI1B	100	59.531	ENSIPUG00000012769	gfi1b	100	59.531	Ictalurus_punctatus
ENSCAPG00000010404	GFI1B	99	81.370	ENSJJAG00000016355	Gfi1b	100	81.370	Jaculus_jaculus
ENSCAPG00000010404	GFI1B	100	60.121	ENSKMAG00000016047	gfi1b	100	60.121	Kryptolebias_marmoratus
ENSCAPG00000010404	GFI1B	100	59.050	ENSLBEG00000020297	gfi1b	99	59.050	Labrus_bergylta
ENSCAPG00000010404	GFI1B	100	63.174	ENSLACG00000012207	GFI1B	100	63.174	Latimeria_chalumnae
ENSCAPG00000010404	GFI1B	100	60.947	ENSLOCG00000005750	gfi1b	100	60.947	Lepisosteus_oculatus
ENSCAPG00000010404	GFI1B	100	78.378	ENSLAFG00000022367	GFI1B	100	78.378	Loxodonta_africana
ENSCAPG00000010404	GFI1B	100	59.692	ENSMAMG00000003040	gfi1b	100	59.692	Mastacembelus_armatus
ENSCAPG00000010404	GFI1B	99	56.119	ENSMZEG00005015594	gfi1b	99	56.119	Maylandia_zebra
ENSCAPG00000010404	GFI1B	100	67.647	ENSMGAG00000006129	GFI1B	100	67.647	Meleagris_gallopavo
ENSCAPG00000010404	GFI1B	100	58.507	ENSMMOG00000011764	gfi1b	100	58.507	Mola_mola
ENSCAPG00000010404	GFI1B	100	69.613	ENSMODG00000012600	GFI1B	100	69.613	Monodelphis_domestica
ENSCAPG00000010404	GFI1B	100	57.357	ENSMALG00000004034	gfi1b	100	57.357	Monopterus_albus
ENSCAPG00000010404	GFI1B	99	80.387	ENSNGAG00000003333	Gfi1b	100	80.387	Nannospalax_galili
ENSCAPG00000010404	GFI1B	100	56.250	ENSNBRG00000012391	gfi1b	100	56.250	Neolamprologus_brichardi
ENSCAPG00000010404	GFI1B	56	50.299	ENSNBRG00000012376	-	100	62.222	Neolamprologus_brichardi
ENSCAPG00000010404	GFI1B	100	56.213	ENSONIG00000013011	gfi1b	94	82.682	Oreochromis_niloticus
ENSCAPG00000010404	GFI1B	100	69.091	ENSOANG00000014723	GFI1B	100	69.091	Ornithorhynchus_anatinus
ENSCAPG00000010404	GFI1B	100	92.035	ENSORLG00000014390	GFI1B	100	47.493	Oryzias_latipes
ENSCAPG00000010404	GFI1B	100	57.391	ENSORLG00020003719	GFI1B	100	57.391	Oryzias_latipes_hni
ENSCAPG00000010404	GFI1B	100	57.726	ENSORLG00015017142	gfi1b	100	57.726	Oryzias_latipes_hsok
ENSCAPG00000010404	GFI1B	100	56.250	ENSOMEG00000015149	GFI1B	100	56.250	Oryzias_melastigma
ENSCAPG00000010404	GFI1B	100	75.831	ENSOGAG00000008879	GFI1B	100	75.529	Otolemur_garnettii
ENSCAPG00000010404	GFI1B	100	59.420	ENSPKIG00000007643	gfi1b	100	59.420	Paramormyrops_kingsleyae
ENSCAPG00000010404	GFI1B	100	68.876	ENSPSIG00000012112	GFI1B	100	68.876	Pelodiscus_sinensis
ENSCAPG00000010404	GFI1B	99	58.485	ENSPMGG00000006021	gfi1b	99	59.091	Periophthalmus_magnuspinnatus
ENSCAPG00000010404	GFI1B	100	70.685	ENSPCIG00000019724	GFI1B	100	70.685	Phascolarctos_cinereus
ENSCAPG00000010404	GFI1B	100	58.580	ENSPFOG00000003460	gfi1b	100	58.580	Poecilia_formosa
ENSCAPG00000010404	GFI1B	100	55.874	ENSPLAG00000017181	GFI1B	100	55.874	Poecilia_latipinna
ENSCAPG00000010404	GFI1B	100	59.403	ENSPLAG00000021960	GFI1B	100	59.403	Poecilia_latipinna
ENSCAPG00000010404	GFI1B	100	59.403	ENSPMEG00000001556	GFI1B	100	59.403	Poecilia_mexicana
ENSCAPG00000010404	GFI1B	100	59.403	ENSPMEG00000019220	gfi1b	100	59.403	Poecilia_mexicana
ENSCAPG00000010404	GFI1B	100	59.403	ENSPREG00000021718	gfi1b	100	59.403	Poecilia_reticulata
ENSCAPG00000010404	GFI1B	70	71.366	ENSPNYG00000018422	gfi1b	70	71.366	Pundamilia_nyererei
ENSCAPG00000010404	GFI1B	100	60.299	ENSPNAG00000021118	gfi1b	100	60.299	Pygocentrus_nattereri
ENSCAPG00000010404	GFI1B	100	65.565	ENSSHAG00000006462	GFI1B	100	65.565	Sarcophilus_harrisii
ENSCAPG00000010404	GFI1B	83	53.873	ENSSFOG00015011566	gfi1b	90	53.873	Scleropages_formosus
ENSCAPG00000010404	GFI1B	99	60.060	ENSSMAG00000015181	gfi1b	99	58.967	Scophthalmus_maximus
ENSCAPG00000010404	GFI1B	100	58.434	ENSSDUG00000011604	gfi1b	100	58.434	Seriola_dumerili
ENSCAPG00000010404	GFI1B	100	58.434	ENSSLDG00000013823	gfi1b	100	58.434	Seriola_lalandi_dorsalis
ENSCAPG00000010404	GFI1B	100	56.196	ENSSPUG00000016039	GFI1B	100	56.196	Sphenodon_punctatus
ENSCAPG00000010404	GFI1B	100	59.337	ENSSPAG00000022914	gfi1b	100	59.337	Stegastes_partitus
ENSCAPG00000010404	GFI1B	55	70.248	ENSTGUG00000015953	-	85	59.877	Taeniopygia_guttata
ENSCAPG00000010404	GFI1B	57	94.737	ENSTGUG00000005282	-	100	94.737	Taeniopygia_guttata
ENSCAPG00000010404	GFI1B	100	57.227	ENSTRUG00000004525	gfi1b	100	57.227	Takifugu_rubripes
ENSCAPG00000010404	GFI1B	100	58.133	ENSTNIG00000003834	gfi1b	100	58.133	Tetraodon_nigroviridis
ENSCAPG00000010404	GFI1B	89	94.828	ENSTBEG00000014459	GFI1B	83	94.828	Tupaia_belangeri
ENSCAPG00000010404	GFI1B	100	61.850	ENSXETG00000006263	gfi1b	100	61.988	Xenopus_tropicalis
ENSCAPG00000010404	GFI1B	100	59.639	ENSXMAG00000027589	gfi1b	100	59.639	Xiphophorus_maculatus