EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAPG00000010466 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 71428 bases
Position: chrAVPZ01000889.1:12098556-12169983
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000008889	NUC153	PF08159.12	9e-12	1	1
ENSCAPP00000008884	NUC153	PF08159.12	9.1e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000012593	-	2157	-	ENSCAPP00000008884	718 (aa)	-	-
ENSCAPT00000012598	-	2124	-	ENSCAPP00000008889	707 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000010466's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000010466's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAPG00000010466	-	90	97.561	ENSCAPG00000010333	-	100	98.374

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000010466	-	100	68.508	ENSG00000089048	ESF1	100	69.330	Homo_sapiens
ENSCAPG00000010466	-	61	47.495	ENSAPOG00000003004	esf1	94	48.269	Acanthochromis_polyacanthus
ENSCAPG00000010466	-	100	68.692	ENSAMEG00000008830	ESF1	100	67.757	Ailuropoda_melanoleuca
ENSCAPG00000010466	-	54	70.667	ENSACIG00000018305	esf1	65	70.833	Amphilophus_citrinellus
ENSCAPG00000010466	-	79	74.026	ENSAOCG00000006033	esf1	88	73.611	Amphiprion_ocellaris
ENSCAPG00000010466	-	53	74.026	ENSAPEG00000022385	esf1	88	73.611	Amphiprion_percula
ENSCAPG00000010466	-	54	72.973	ENSATEG00000016321	esf1	99	46.890	Anabas_testudineus
ENSCAPG00000010466	-	80	65.934	ENSAPLG00000012113	ESF1	75	70.833	Anas_platyrhynchos
ENSCAPG00000010466	-	54	80.460	ENSACAG00000000963	ESF1	75	83.333	Anolis_carolinensis
ENSCAPG00000010466	-	100	70.165	ENSANAG00000036778	ESF1	100	70.165	Aotus_nancymaae
ENSCAPG00000010466	-	60	70.130	ENSACLG00000002972	esf1	56	69.444	Astatotilapia_calliptera
ENSCAPG00000010466	-	68	53.274	ENSAMXG00000001172	esf1	92	65.278	Astyanax_mexicanus
ENSCAPG00000010466	-	100	67.366	ENSBTAG00000007130	ESF1	100	67.016	Bos_taurus
ENSCAPG00000010466	-	100	69.905	ENSCJAG00000004640	ESF1	100	70.379	Callithrix_jacchus
ENSCAPG00000010466	-	94	78.986	ENSCAFG00000005587	ESF1	100	67.294	Canis_familiaris
ENSCAPG00000010466	-	94	78.986	ENSCAFG00020027530	ESF1	100	67.294	Canis_lupus_dingo
ENSCAPG00000010466	-	100	66.628	ENSCHIG00000021188	ESF1	100	69.065	Capra_hircus
ENSCAPG00000010466	-	100	69.870	ENSTSYG00000009956	ESF1	100	70.107	Carlito_syrichta
ENSCAPG00000010466	-	100	80.505	ENSCPOG00000014027	-	100	81.468	Cavia_porcellus
ENSCAPG00000010466	-	100	70.095	ENSCCAG00000024521	ESF1	100	70.331	Cebus_capucinus
ENSCAPG00000010466	-	100	66.628	ENSCATG00000042792	ESF1	100	70.270	Cercocebus_atys
ENSCAPG00000010466	-	100	73.317	ENSCLAG00000013266	-	100	74.399	Chinchilla_lanigera
ENSCAPG00000010466	-	87	83.099	ENSCSAG00000011777	ESF1	100	70.082	Chlorocebus_sabaeus
ENSCAPG00000010466	-	83	42.342	ENSCSAVG00000009015	-	87	47.619	Ciona_savignyi
ENSCAPG00000010466	-	100	69.168	ENSCANG00000030674	ESF1	100	69.871	Colobus_angolensis_palliatus
ENSCAPG00000010466	-	100	68.945	ENSCGRG00001018257	Esf1	100	69.305	Cricetulus_griseus_chok1gshd
ENSCAPG00000010466	-	77	66.154	ENSCSEG00000001159	esf1	91	66.667	Cynoglossus_semilaevis
ENSCAPG00000010466	-	50	72.308	ENSCVAG00000007894	esf1	90	73.016	Cyprinodon_variegatus
ENSCAPG00000010466	-	51	66.216	ENSDARG00000008740	esf1	86	66.667	Danio_rerio
ENSCAPG00000010466	-	100	67.260	ENSDNOG00000019409	ESF1	100	67.853	Dasypus_novemcinctus
ENSCAPG00000010466	-	74	67.628	ENSDORG00000016313	Esf1	100	68.214	Dipodomys_ordii
ENSCAPG00000010466	-	67	50.588	FBgn0024364	CG11417	75	55.714	Drosophila_melanogaster
ENSCAPG00000010466	-	71	90.278	ENSETEG00000004471	ESF1	71	74.786	Echinops_telfairi
ENSCAPG00000010466	-	80	59.551	ENSEBUG00000015161	esf1	52	45.480	Eptatretus_burgeri
ENSCAPG00000010466	-	100	67.845	ENSEASG00005001777	ESF1	100	67.727	Equus_asinus_asinus
ENSCAPG00000010466	-	100	67.962	ENSECAG00000019188	ESF1	100	67.845	Equus_caballus
ENSCAPG00000010466	-	62	91.096	ENSEEUG00000015837	-	73	91.096	Erinaceus_europaeus
ENSCAPG00000010466	-	53	65.060	ENSELUG00000000408	esf1	59	68.056	Esox_lucius
ENSCAPG00000010466	-	100	68.772	ENSFCAG00000000919	ESF1	100	67.953	Felis_catus
ENSCAPG00000010466	-	84	63.110	ENSFALG00000010914	ESF1	85	63.200	Ficedula_albicollis
ENSCAPG00000010466	-	100	72.639	ENSFDAG00000014777	ESF1	100	73.245	Fukomys_damarensis
ENSCAPG00000010466	-	80	67.442	ENSGALG00000034768	ESF1	79	69.444	Gallus_gallus
ENSCAPG00000010466	-	78	66.216	ENSGAFG00000000540	esf1	90	66.667	Gambusia_affinis
ENSCAPG00000010466	-	100	68.390	ENSGGOG00000006692	ESF1	100	69.213	Gorilla_gorilla
ENSCAPG00000010466	-	59	71.429	ENSHBUG00000001890	esf1	56	70.833	Haplochromis_burtoni
ENSCAPG00000010466	-	100	74.155	ENSHGLG00000011505	ESF1	100	73.551	Heterocephalus_glaber_female
ENSCAPG00000010466	-	100	74.155	ENSHGLG00100015045	ESF1	100	73.551	Heterocephalus_glaber_male
ENSCAPG00000010466	-	100	71.207	ENSSTOG00000009846	ESF1	100	70.729	Ictidomys_tridecemlineatus
ENSCAPG00000010466	-	100	68.602	ENSJJAG00000012570	Esf1	100	68.957	Jaculus_jaculus
ENSCAPG00000010466	-	79	81.176	ENSLACG00000016439	ESF1	79	82.857	Latimeria_chalumnae
ENSCAPG00000010466	-	61	61.224	ENSLOCG00000015979	esf1	90	60.544	Lepisosteus_oculatus
ENSCAPG00000010466	-	100	68.319	ENSLAFG00000005479	ESF1	100	68.772	Loxodonta_africana
ENSCAPG00000010466	-	87	84.507	ENSMFAG00000036841	ESF1	100	70.270	Macaca_fascicularis
ENSCAPG00000010466	-	87	84.507	ENSMNEG00000044042	ESF1	100	70.270	Macaca_nemestrina
ENSCAPG00000010466	-	87	83.803	ENSMLEG00000037121	ESF1	100	70.153	Mandrillus_leucophaeus
ENSCAPG00000010466	-	54	72.973	ENSMAMG00000018648	esf1	88	73.611	Mastacembelus_armatus
ENSCAPG00000010466	-	89	68.182	ENSMGAG00000004291	ESF1	74	70.833	Meleagris_gallopavo
ENSCAPG00000010466	-	100	67.703	ENSMAUG00000015975	Esf1	100	69.617	Mesocricetus_auratus
ENSCAPG00000010466	-	100	69.965	ENSMICG00000010711	ESF1	100	70.789	Microcebus_murinus
ENSCAPG00000010466	-	100	69.471	ENSMOCG00000005902	Esf1	100	70.738	Microtus_ochrogaster
ENSCAPG00000010466	-	100	61.473	ENSMODG00000005066	ESF1	100	61.957	Monodelphis_domestica
ENSCAPG00000010466	-	71	68.919	ENSMALG00000007338	esf1	83	69.444	Monopterus_albus
ENSCAPG00000010466	-	100	68.683	MGP_CAROLIEiJ_G0024365	Esf1	100	68.802	Mus_caroli
ENSCAPG00000010466	-	100	67.967	ENSMUSG00000045624	Esf1	100	68.203	Mus_musculus
ENSCAPG00000010466	-	100	68.683	MGP_PahariEiJ_G0025810	Esf1	100	68.446	Mus_pahari
ENSCAPG00000010466	-	100	68.371	MGP_SPRETEiJ_G0025285	Esf1	100	68.452	Mus_spretus
ENSCAPG00000010466	-	100	68.273	ENSMPUG00000001450	ESF1	100	68.625	Mustela_putorius_furo
ENSCAPG00000010466	-	100	68.316	ENSMLUG00000013080	ESF1	100	68.080	Myotis_lucifugus
ENSCAPG00000010466	-	100	69.451	ENSNLEG00000014563	ESF1	100	69.868	Nomascus_leucogenys
ENSCAPG00000010466	-	52	92.444	ENSOPRG00000004862	ESF1	73	92.444	Ochotona_princeps
ENSCAPG00000010466	-	100	72.029	ENSODEG00000006824	ESF1	100	72.989	Octodon_degus
ENSCAPG00000010466	-	54	71.429	ENSONIG00000006804	esf1	56	70.833	Oreochromis_niloticus
ENSCAPG00000010466	-	88	68.108	ENSOANG00000008432	-	100	60.844	Ornithorhynchus_anatinus
ENSCAPG00000010466	-	100	66.112	ENSOCUG00000005414	ESF1	100	67.420	Oryctolagus_cuniculus
ENSCAPG00000010466	-	61	50.810	ENSORLG00000018625	esf1	94	50.710	Oryzias_latipes
ENSCAPG00000010466	-	79	67.949	ENSORLG00015022826	esf1	91	66.667	Oryzias_latipes_hsok
ENSCAPG00000010466	-	61	50.202	ENSOMEG00000009311	esf1	94	50.507	Oryzias_melastigma
ENSCAPG00000010466	-	74	69.966	ENSOGAG00000016912	ESF1	100	70.885	Otolemur_garnettii
ENSCAPG00000010466	-	68	75.676	ENSOARG00000011158	ESF1	100	65.757	Ovis_aries
ENSCAPG00000010466	-	100	69.231	ENSPPAG00000024379	ESF1	100	69.349	Pan_paniscus
ENSCAPG00000010466	-	100	68.192	ENSPPRG00000012007	ESF1	100	68.075	Panthera_pardus
ENSCAPG00000010466	-	100	68.273	ENSPTIG00000020063	ESF1	100	68.273	Panthera_tigris_altaica
ENSCAPG00000010466	-	100	68.427	ENSPTRG00000013258	ESF1	100	69.014	Pan_troglodytes
ENSCAPG00000010466	-	93	48.252	ENSPMGG00000016911	esf1	89	48.252	Periophthalmus_magnuspinnatus
ENSCAPG00000010466	-	64	51.323	ENSPFOG00000010101	esf1	79	46.064	Poecilia_formosa
ENSCAPG00000010466	-	61	54.013	ENSPLAG00000006452	esf1	94	55.388	Poecilia_latipinna
ENSCAPG00000010466	-	79	63.514	ENSPMEG00000000713	esf1	88	63.889	Poecilia_mexicana
ENSCAPG00000010466	-	56	63.514	ENSPREG00000004431	esf1	86	63.889	Poecilia_reticulata
ENSCAPG00000010466	-	100	67.606	ENSPPYG00000010715	ESF1	100	69.366	Pongo_abelii
ENSCAPG00000010466	-	94	83.784	ENSPCAG00000006881	ESF1	100	63.853	Procavia_capensis
ENSCAPG00000010466	-	86	95.833	ENSPVAG00000001295	ESF1	83	95.833	Pteropus_vampyrus
ENSCAPG00000010466	-	59	68.831	ENSPNYG00000015735	esf1	56	69.444	Pundamilia_nyererei
ENSCAPG00000010466	-	61	57.407	ENSPNAG00000014721	esf1	90	58.025	Pygocentrus_nattereri
ENSCAPG00000010466	-	100	67.340	ENSRNOG00000004777	Esf1	100	68.171	Rattus_norvegicus
ENSCAPG00000010466	-	100	68.941	ENSRBIG00000035763	ESF1	100	69.765	Rhinopithecus_bieti
ENSCAPG00000010466	-	100	72.604	ENSRROG00000032022	ESF1	100	73.342	Rhinopithecus_roxellana
ENSCAPG00000010466	-	54	31.765	YDR365C	-	65	32.333	Saccharomyces_cerevisiae
ENSCAPG00000010466	-	100	69.376	ENSSBOG00000030387	ESF1	100	70.082	Saimiri_boliviensis_boliviensis
ENSCAPG00000010466	-	95	82.432	ENSSHAG00000000449	ESF1	90	82.993	Sarcophilus_harrisii
ENSCAPG00000010466	-	53	71.622	ENSSDUG00000019460	esf1	99	72.222	Seriola_dumerili
ENSCAPG00000010466	-	100	55.583	ENSSPUG00000012635	ESF1	78	76.389	Sphenodon_punctatus
ENSCAPG00000010466	-	53	71.795	ENSSPAG00000019077	esf1	87	72.222	Stegastes_partitus
ENSCAPG00000010466	-	100	67.787	ENSSSCG00000007077	ESF1	100	68.219	Sus_scrofa
ENSCAPG00000010466	-	78	73.611	ENSTGUG00000002450	ESF1	73	73.611	Taeniopygia_guttata
ENSCAPG00000010466	-	83	69.565	ENSTRUG00000009445	esf1	87	66.667	Takifugu_rubripes
ENSCAPG00000010466	-	66	91.781	ENSTBEG00000008552	ESF1	59	91.781	Tupaia_belangeri
ENSCAPG00000010466	-	100	67.761	ENSTTRG00000005335	ESF1	100	67.526	Tursiops_truncatus
ENSCAPG00000010466	-	100	67.488	ENSUMAG00000008579	ESF1	100	67.371	Ursus_maritimus
ENSCAPG00000010466	-	91	72.614	ENSVPAG00000005291	ESF1	93	69.547	Vicugna_pacos
ENSCAPG00000010466	-	100	67.647	ENSVVUG00000014318	ESF1	93	67.412	Vulpes_vulpes
ENSCAPG00000010466	-	77	78.378	ENSXETG00000008079	esf1	100	51.534	Xenopus_tropicalis
ENSCAPG00000010466	-	78	66.216	ENSXMAG00000017651	esf1	87	66.667	Xiphophorus_maculatus