EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000010501 (Gene tree)
Gene ID: -
Gene Symbol: CRNKL1
Alias: CLF|CRN|Clf1|SYF3
Full Name: crooked neck pre-mRNA splicing factor 1
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 9471 bases
Position: chrAVPZ01000889.1:7202675-7212145
Accession: 15762
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000008918	HAT	PF02184.16	1e-40	1	2
ENSCAPP00000008918	HAT	PF02184.16	1e-40	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000012627	CRNKL1-201	1866	-	ENSCAPP00000008918	622 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000010501's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000010501's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000010501	CRNKL1	99	94.992	ENSG00000101343	CRNKL1	95	94.992	Homo_sapiens
ENSCAPG00000010501	CRNKL1	99	84.541	ENSAPOG00000009705	crnkl1	90	84.539	Acanthochromis_polyacanthus
ENSCAPG00000010501	CRNKL1	99	96.284	ENSAMEG00000000270	CRNKL1	79	96.284	Ailuropoda_melanoleuca
ENSCAPG00000010501	CRNKL1	98	84.679	ENSACIG00000015267	crnkl1	81	84.679	Amphilophus_citrinellus
ENSCAPG00000010501	CRNKL1	99	84.702	ENSAOCG00000021964	crnkl1	85	84.702	Amphiprion_ocellaris
ENSCAPG00000010501	CRNKL1	99	84.491	ENSAPEG00000015041	crnkl1	85	84.491	Amphiprion_percula
ENSCAPG00000010501	CRNKL1	98	84.013	ENSATEG00000001068	crnkl1	80	84.013	Anabas_testudineus
ENSCAPG00000010501	CRNKL1	99	91.438	ENSAPLG00000013105	CRNKL1	95	91.438	Anas_platyrhynchos
ENSCAPG00000010501	CRNKL1	99	91.086	ENSACAG00000005284	CRNKL1	95	91.086	Anolis_carolinensis
ENSCAPG00000010501	CRNKL1	91	95.390	ENSANAG00000024889	CRNKL1	95	95.390	Aotus_nancymaae
ENSCAPG00000010501	CRNKL1	99	84.355	ENSACLG00000010813	crnkl1	82	84.355	Astatotilapia_calliptera
ENSCAPG00000010501	CRNKL1	96	85.427	ENSAMXG00000018334	crnkl1	83	83.333	Astyanax_mexicanus
ENSCAPG00000010501	CRNKL1	100	95.338	ENSBTAG00000008472	CRNKL1	95	95.338	Bos_taurus
ENSCAPG00000010501	CRNKL1	96	61.937	WBGene00019762	M03F8.3	84	60.417	Caenorhabditis_elegans
ENSCAPG00000010501	CRNKL1	99	94.992	ENSCJAG00000005393	CRNKL1	95	94.992	Callithrix_jacchus
ENSCAPG00000010501	CRNKL1	99	95.961	ENSCAFG00000005333	CRNKL1	90	95.961	Canis_familiaris
ENSCAPG00000010501	CRNKL1	99	95.961	ENSCAFG00020027488	CRNKL1	95	95.961	Canis_lupus_dingo
ENSCAPG00000010501	CRNKL1	100	94.051	ENSCHIG00000013171	CRNKL1	95	94.051	Capra_hircus
ENSCAPG00000010501	CRNKL1	99	94.830	ENSTSYG00000004197	CRNKL1	95	94.830	Carlito_syrichta
ENSCAPG00000010501	CRNKL1	99	99.838	ENSCPOG00000004418	CRNKL1	95	99.838	Cavia_porcellus
ENSCAPG00000010501	CRNKL1	99	94.992	ENSCCAG00000027037	CRNKL1	95	94.992	Cebus_capucinus
ENSCAPG00000010501	CRNKL1	99	94.992	ENSCATG00000034247	CRNKL1	95	94.992	Cercocebus_atys
ENSCAPG00000010501	CRNKL1	99	98.384	ENSCLAG00000013859	CRNKL1	95	98.384	Chinchilla_lanigera
ENSCAPG00000010501	CRNKL1	99	94.992	ENSCSAG00000011434	CRNKL1	95	94.992	Chlorocebus_sabaeus
ENSCAPG00000010501	CRNKL1	99	95.961	ENSCHOG00000006371	CRNKL1	80	95.961	Choloepus_hoffmanni
ENSCAPG00000010501	CRNKL1	99	92.246	ENSCPBG00000023501	CRNKL1	96	92.246	Chrysemys_picta_bellii
ENSCAPG00000010501	CRNKL1	96	69.463	ENSCING00000002709	-	95	67.638	Ciona_intestinalis
ENSCAPG00000010501	CRNKL1	99	94.830	ENSCANG00000038789	CRNKL1	95	94.830	Colobus_angolensis_palliatus
ENSCAPG00000010501	CRNKL1	99	97.258	ENSCGRG00001001115	-	95	97.258	Cricetulus_griseus_chok1gshd
ENSCAPG00000010501	CRNKL1	99	97.258	ENSCGRG00001000687	-	95	97.258	Cricetulus_griseus_chok1gshd
ENSCAPG00000010501	CRNKL1	99	97.258	ENSCGRG00000007854	Crnkl1	95	97.258	Cricetulus_griseus_crigri
ENSCAPG00000010501	CRNKL1	98	84.539	ENSCSEG00000005594	crnkl1	82	83.200	Cynoglossus_semilaevis
ENSCAPG00000010501	CRNKL1	96	85.977	ENSCVAG00000015172	crnkl1	86	83.736	Cyprinodon_variegatus
ENSCAPG00000010501	CRNKL1	96	85.210	ENSDARG00000007901	crnkl1	84	83.793	Danio_rerio
ENSCAPG00000010501	CRNKL1	99	96.266	ENSDNOG00000016226	CRNKL1	91	96.266	Dasypus_novemcinctus
ENSCAPG00000010501	CRNKL1	99	95.200	ENSDORG00000000394	-	96	95.200	Dipodomys_ordii
ENSCAPG00000010501	CRNKL1	97	87.542	ENSDORG00000023724	-	95	87.542	Dipodomys_ordii
ENSCAPG00000010501	CRNKL1	97	87.043	ENSDORG00000030174	-	95	87.043	Dipodomys_ordii
ENSCAPG00000010501	CRNKL1	96	68.204	FBgn0000377	crn	96	65.777	Drosophila_melanogaster
ENSCAPG00000010501	CRNKL1	99	82.553	ENSETEG00000003711	CRNKL1	76	82.553	Echinops_telfairi
ENSCAPG00000010501	CRNKL1	99	59.921	ENSEBUG00000013461	crnkl1	86	59.921	Eptatretus_burgeri
ENSCAPG00000010501	CRNKL1	99	96.284	ENSEASG00005002072	CRNKL1	95	96.284	Equus_asinus_asinus
ENSCAPG00000010501	CRNKL1	99	96.284	ENSECAG00000022215	CRNKL1	95	96.284	Equus_caballus
ENSCAPG00000010501	CRNKL1	99	92.892	ENSEEUG00000000413	CRNKL1	88	92.892	Erinaceus_europaeus
ENSCAPG00000010501	CRNKL1	97	83.527	ENSELUG00000015424	crnkl1	91	81.965	Esox_lucius
ENSCAPG00000010501	CRNKL1	99	96.284	ENSFCAG00000000714	CRNKL1	95	96.284	Felis_catus
ENSCAPG00000010501	CRNKL1	99	90.161	ENSFALG00000004611	CRNKL1	98	90.161	Ficedula_albicollis
ENSCAPG00000010501	CRNKL1	99	98.061	ENSFDAG00000000604	CRNKL1	95	98.061	Fukomys_damarensis
ENSCAPG00000010501	CRNKL1	97	84.818	ENSFHEG00000013163	crnkl1	83	83.441	Fundulus_heteroclitus
ENSCAPG00000010501	CRNKL1	96	83.694	ENSGMOG00000007609	crnkl1	88	81.774	Gadus_morhua
ENSCAPG00000010501	CRNKL1	99	92.246	ENSGALG00000008429	CRNKL1	96	92.246	Gallus_gallus
ENSCAPG00000010501	CRNKL1	96	85.142	ENSGAFG00000014249	crnkl1	84	82.692	Gambusia_affinis
ENSCAPG00000010501	CRNKL1	99	82.658	ENSGACG00000011852	crnkl1	84	82.658	Gasterosteus_aculeatus
ENSCAPG00000010501	CRNKL1	99	91.667	ENSGAGG00000021233	CRNKL1	100	91.667	Gopherus_agassizii
ENSCAPG00000010501	CRNKL1	99	94.992	ENSGGOG00000014176	CRNKL1	95	94.992	Gorilla_gorilla
ENSCAPG00000010501	CRNKL1	99	84.194	ENSHBUG00000005246	crnkl1	82	84.194	Haplochromis_burtoni
ENSCAPG00000010501	CRNKL1	99	98.223	ENSHGLG00000010856	CRNKL1	95	98.223	Heterocephalus_glaber_female
ENSCAPG00000010501	CRNKL1	99	98.223	ENSHGLG00100011521	CRNKL1	95	98.223	Heterocephalus_glaber_male
ENSCAPG00000010501	CRNKL1	97	82.363	ENSHCOG00000006420	crnkl1	92	80.484	Hippocampus_comes
ENSCAPG00000010501	CRNKL1	96	85.619	ENSIPUG00000006751	crnkl1	86	83.683	Ictalurus_punctatus
ENSCAPG00000010501	CRNKL1	91	65.669	ENSIPUG00000000315	-	95	67.019	Ictalurus_punctatus
ENSCAPG00000010501	CRNKL1	96	75.377	ENSIPUG00000006836	-	96	74.507	Ictalurus_punctatus
ENSCAPG00000010501	CRNKL1	99	97.900	ENSSTOG00000014747	CRNKL1	95	97.900	Ictidomys_tridecemlineatus
ENSCAPG00000010501	CRNKL1	99	94.488	ENSJJAG00000016926	Crnkl1	96	94.488	Jaculus_jaculus
ENSCAPG00000010501	CRNKL1	99	84.330	ENSKMAG00000003620	crnkl1	81	84.330	Kryptolebias_marmoratus
ENSCAPG00000010501	CRNKL1	96	67.657	ENSLBEG00000003543	crnkl1	85	67.909	Labrus_bergylta
ENSCAPG00000010501	CRNKL1	99	86.386	ENSLACG00000001129	CRNKL1	90	86.386	Latimeria_chalumnae
ENSCAPG00000010501	CRNKL1	96	87.605	ENSLOCG00000016889	crnkl1	85	86.062	Lepisosteus_oculatus
ENSCAPG00000010501	CRNKL1	99	96.123	ENSLAFG00000004512	CRNKL1	95	96.123	Loxodonta_africana
ENSCAPG00000010501	CRNKL1	99	94.992	ENSMFAG00000039893	CRNKL1	95	94.992	Macaca_fascicularis
ENSCAPG00000010501	CRNKL1	99	94.992	ENSMMUG00000007709	CRNKL1	95	94.992	Macaca_mulatta
ENSCAPG00000010501	CRNKL1	99	94.992	ENSMNEG00000037490	CRNKL1	95	94.992	Macaca_nemestrina
ENSCAPG00000010501	CRNKL1	99	94.992	ENSMLEG00000034885	CRNKL1	95	94.992	Mandrillus_leucophaeus
ENSCAPG00000010501	CRNKL1	99	83.897	ENSMAMG00000008757	crnkl1	84	83.897	Mastacembelus_armatus
ENSCAPG00000010501	CRNKL1	99	84.355	ENSMZEG00005022345	crnkl1	82	84.355	Maylandia_zebra
ENSCAPG00000010501	CRNKL1	99	91.452	ENSMGAG00000003452	CRNKL1	90	91.452	Meleagris_gallopavo
ENSCAPG00000010501	CRNKL1	99	97.097	ENSMAUG00000020764	Crnkl1	95	97.097	Mesocricetus_auratus
ENSCAPG00000010501	CRNKL1	99	95.477	ENSMICG00000006048	CRNKL1	95	95.477	Microcebus_murinus
ENSCAPG00000010501	CRNKL1	96	67.057	ENSMOCG00000004179	-	84	67.327	Microtus_ochrogaster
ENSCAPG00000010501	CRNKL1	99	95.095	ENSMOCG00000000681	-	94	95.095	Microtus_ochrogaster
ENSCAPG00000010501	CRNKL1	91	83.363	ENSMMOG00000017601	crnkl1	87	83.363	Mola_mola
ENSCAPG00000010501	CRNKL1	99	84.839	ENSMODG00000010857	-	90	84.839	Monodelphis_domestica
ENSCAPG00000010501	CRNKL1	99	90.127	ENSMODG00000005961	-	95	90.127	Monodelphis_domestica
ENSCAPG00000010501	CRNKL1	99	61.368	ENSMALG00000011211	crnkl1	82	65.416	Monopterus_albus
ENSCAPG00000010501	CRNKL1	99	96.613	MGP_CAROLIEiJ_G0024394	Crnkl1	95	96.613	Mus_caroli
ENSCAPG00000010501	CRNKL1	99	96.774	ENSMUSG00000001767	Crnkl1	95	96.774	Mus_musculus
ENSCAPG00000010501	CRNKL1	99	94.839	MGP_PahariEiJ_G0025838	Crnkl1	95	94.839	Mus_pahari
ENSCAPG00000010501	CRNKL1	99	96.613	MGP_SPRETEiJ_G0025312	Crnkl1	95	96.613	Mus_spretus
ENSCAPG00000010501	CRNKL1	99	96.123	ENSMPUG00000001226	CRNKL1	95	96.123	Mustela_putorius_furo
ENSCAPG00000010501	CRNKL1	99	95.484	ENSMLUG00000016513	CRNKL1	85	95.484	Myotis_lucifugus
ENSCAPG00000010501	CRNKL1	99	94.778	ENSNGAG00000023097	Crnkl1	96	94.778	Nannospalax_galili
ENSCAPG00000010501	CRNKL1	99	84.516	ENSNBRG00000007867	crnkl1	82	84.516	Neolamprologus_brichardi
ENSCAPG00000010501	CRNKL1	99	91.115	ENSNLEG00000009862	CRNKL1	95	91.115	Nomascus_leucogenys
ENSCAPG00000010501	CRNKL1	99	93.376	ENSMEUG00000012167	-	98	93.376	Notamacropus_eugenii
ENSCAPG00000010501	CRNKL1	99	84.491	ENSMEUG00000002361	-	95	84.491	Notamacropus_eugenii
ENSCAPG00000010501	CRNKL1	83	66.602	ENSOPRG00000009242	-	61	66.602	Ochotona_princeps
ENSCAPG00000010501	CRNKL1	99	98.223	ENSODEG00000012175	CRNKL1	95	98.223	Octodon_degus
ENSCAPG00000010501	CRNKL1	99	84.839	ENSONIG00000018728	crnkl1	82	84.839	Oreochromis_niloticus
ENSCAPG00000010501	CRNKL1	99	96.753	ENSOCUG00000015484	CRNKL1	79	96.753	Oryctolagus_cuniculus
ENSCAPG00000010501	CRNKL1	99	81.745	ENSORLG00000017240	crnkl1	87	78.045	Oryzias_latipes
ENSCAPG00000010501	CRNKL1	96	83.833	ENSORLG00020001742	crnkl1	80	83.833	Oryzias_latipes_hni
ENSCAPG00000010501	CRNKL1	99	81.906	ENSORLG00015019564	crnkl1	83	81.906	Oryzias_latipes_hsok
ENSCAPG00000010501	CRNKL1	100	82.797	ENSOMEG00000019895	crnkl1	83	82.797	Oryzias_melastigma
ENSCAPG00000010501	CRNKL1	99	95.315	ENSOGAG00000011544	CRNKL1	95	95.315	Otolemur_garnettii
ENSCAPG00000010501	CRNKL1	100	95.338	ENSOARG00000002150	CRNKL1	86	95.338	Ovis_aries
ENSCAPG00000010501	CRNKL1	99	93.700	ENSPPAG00000027847	CRNKL1	79	93.700	Pan_paniscus
ENSCAPG00000010501	CRNKL1	99	96.284	ENSPPRG00000001955	CRNKL1	95	96.284	Panthera_pardus
ENSCAPG00000010501	CRNKL1	99	96.284	ENSPTIG00000007393	CRNKL1	95	96.284	Panthera_tigris_altaica
ENSCAPG00000010501	CRNKL1	99	94.992	ENSPTRG00000030609	CRNKL1	95	94.992	Pan_troglodytes
ENSCAPG00000010501	CRNKL1	99	94.992	ENSPANG00000017420	CRNKL1	95	94.992	Papio_anubis
ENSCAPG00000010501	CRNKL1	96	80.100	ENSPKIG00000017093	crnkl1	82	79.350	Paramormyrops_kingsleyae
ENSCAPG00000010501	CRNKL1	99	92.407	ENSPSIG00000012705	CRNKL1	95	92.407	Pelodiscus_sinensis
ENSCAPG00000010501	CRNKL1	99	76.835	ENSPMGG00000006263	crnkl1	89	76.835	Periophthalmus_magnuspinnatus
ENSCAPG00000010501	CRNKL1	99	97.097	ENSPEMG00000000073	-	95	97.097	Peromyscus_maniculatus_bairdii
ENSCAPG00000010501	CRNKL1	99	79.968	ENSPMAG00000002250	crnkl1	90	79.968	Petromyzon_marinus
ENSCAPG00000010501	CRNKL1	99	92.407	ENSPCIG00000025825	CRNKL1	92	92.407	Phascolarctos_cinereus
ENSCAPG00000010501	CRNKL1	96	84.975	ENSPFOG00000005102	crnkl1	87	82.825	Poecilia_formosa
ENSCAPG00000010501	CRNKL1	96	84.975	ENSPLAG00000007288	crnkl1	84	82.692	Poecilia_latipinna
ENSCAPG00000010501	CRNKL1	96	85.142	ENSPMEG00000008865	crnkl1	87	82.986	Poecilia_mexicana
ENSCAPG00000010501	CRNKL1	96	84.641	ENSPREG00000012615	crnkl1	86	82.553	Poecilia_reticulata
ENSCAPG00000010501	CRNKL1	99	94.669	ENSPPYG00000010747	CRNKL1	77	94.669	Pongo_abelii
ENSCAPG00000010501	CRNKL1	99	89.499	ENSPCAG00000003296	CRNKL1	81	89.499	Procavia_capensis
ENSCAPG00000010501	CRNKL1	99	94.023	ENSPCOG00000017608	CRNKL1	79	94.023	Propithecus_coquereli
ENSCAPG00000010501	CRNKL1	99	96.123	ENSPVAG00000006207	CRNKL1	80	96.123	Pteropus_vampyrus
ENSCAPG00000010501	CRNKL1	99	84.194	ENSPNYG00000001977	crnkl1	82	84.194	Pundamilia_nyererei
ENSCAPG00000010501	CRNKL1	97	86.401	ENSPNAG00000001507	crnkl1	88	81.320	Pygocentrus_nattereri
ENSCAPG00000010501	CRNKL1	99	96.290	ENSRNOG00000040045	Crnkl1	95	96.290	Rattus_norvegicus
ENSCAPG00000010501	CRNKL1	99	96.774	ENSRNOG00000010587	Crnkl1	95	96.774	Rattus_norvegicus
ENSCAPG00000010501	CRNKL1	99	94.830	ENSRBIG00000031770	CRNKL1	95	94.830	Rhinopithecus_bieti
ENSCAPG00000010501	CRNKL1	99	94.669	ENSRROG00000040450	CRNKL1	95	94.669	Rhinopithecus_roxellana
ENSCAPG00000010501	CRNKL1	96	38.222	YLR117C	CLF1	93	38.318	Saccharomyces_cerevisiae
ENSCAPG00000010501	CRNKL1	99	94.992	ENSSBOG00000029672	CRNKL1	95	94.992	Saimiri_boliviensis_boliviensis
ENSCAPG00000010501	CRNKL1	97	73.964	ENSSHAG00000011199	CRNKL1	91	73.964	Sarcophilus_harrisii
ENSCAPG00000010501	CRNKL1	96	85.546	ENSSFOG00015000946	crnkl1	83	83.793	Scleropages_formosus
ENSCAPG00000010501	CRNKL1	99	81.994	ENSSMAG00000007933	crnkl1	83	81.994	Scophthalmus_maximus
ENSCAPG00000010501	CRNKL1	99	76.849	ENSSDUG00000012625	crnkl1	79	76.849	Seriola_dumerili
ENSCAPG00000010501	CRNKL1	99	84.058	ENSSLDG00000021413	crnkl1	80	84.058	Seriola_lalandi_dorsalis
ENSCAPG00000010501	CRNKL1	99	94.830	ENSSARG00000006443	CRNKL1	79	94.830	Sorex_araneus
ENSCAPG00000010501	CRNKL1	99	91.086	ENSSPUG00000005254	CRNKL1	95	91.086	Sphenodon_punctatus
ENSCAPG00000010501	CRNKL1	99	83.897	ENSSPAG00000016150	crnkl1	80	86.311	Stegastes_partitus
ENSCAPG00000010501	CRNKL1	100	95.659	ENSSSCG00000038587	CRNKL1	95	95.659	Sus_scrofa
ENSCAPG00000010501	CRNKL1	99	90.484	ENSTGUG00000007645	CRNKL1	94	90.484	Taeniopygia_guttata
ENSCAPG00000010501	CRNKL1	97	77.815	ENSTRUG00000015417	crnkl1	83	77.162	Takifugu_rubripes
ENSCAPG00000010501	CRNKL1	96	82.529	ENSTNIG00000010710	crnkl1	90	80.899	Tetraodon_nigroviridis
ENSCAPG00000010501	CRNKL1	91	93.972	ENSTBEG00000001304	CRNKL1	78	93.972	Tupaia_belangeri
ENSCAPG00000010501	CRNKL1	91	91.135	ENSTTRG00000000484	CRNKL1	77	91.135	Tursiops_truncatus
ENSCAPG00000010501	CRNKL1	99	96.284	ENSUAMG00000018586	CRNKL1	95	96.284	Ursus_americanus
ENSCAPG00000010501	CRNKL1	99	96.284	ENSUMAG00000024957	CRNKL1	95	96.284	Ursus_maritimus
ENSCAPG00000010501	CRNKL1	99	95.961	ENSVVUG00000012559	CRNKL1	79	95.961	Vulpes_vulpes
ENSCAPG00000010501	CRNKL1	99	88.245	ENSXETG00000009698	crnkl1	90	88.245	Xenopus_tropicalis
ENSCAPG00000010501	CRNKL1	96	84.333	ENSXCOG00000000824	crnkl1	85	82.468	Xiphophorus_couchianus
ENSCAPG00000010501	CRNKL1	96	85.142	ENSXMAG00000006896	crnkl1	85	83.252	Xiphophorus_maculatus