EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000010592 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 29511 bases
Position: chrAVPZ01000134.1:16981189-17010699
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000009045	CPL	PF08144.11	3e-52	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000012758	-	1935	-	ENSCAPP00000009045	644 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000010592's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000010592's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000010592	-	99	86.420	ENSG00000080608	PUM3	100	86.287	Homo_sapiens
ENSCAPG00000010592	-	89	54.925	ENSAPOG00000020252	pum3	98	52.987	Acanthochromis_polyacanthus
ENSCAPG00000010592	-	97	86.709	ENSAMEG00000012187	PUM3	100	85.648	Ailuropoda_melanoleuca
ENSCAPG00000010592	-	86	54.383	ENSACIG00000009786	pum3	86	56.069	Amphilophus_citrinellus
ENSCAPG00000010592	-	82	59.252	ENSAOCG00000004439	pum3	81	59.091	Amphiprion_ocellaris
ENSCAPG00000010592	-	82	59.252	ENSAPEG00000020523	pum3	81	59.091	Amphiprion_percula
ENSCAPG00000010592	-	82	60.561	ENSATEG00000005799	pum3	82	60.531	Anabas_testudineus
ENSCAPG00000010592	-	95	71.543	ENSAPLG00000002920	PUM3	99	71.543	Anas_platyrhynchos
ENSCAPG00000010592	-	90	70.415	ENSACAG00000003174	PUM3	95	70.415	Anolis_carolinensis
ENSCAPG00000010592	-	99	86.687	ENSANAG00000024520	PUM3	99	86.687	Aotus_nancymaae
ENSCAPG00000010592	-	86	58.645	ENSACLG00000001017	pum3	81	60.113	Astatotilapia_calliptera
ENSCAPG00000010592	-	95	62.461	ENSAMXG00000020911	pum3	99	62.461	Astyanax_mexicanus
ENSCAPG00000010592	-	97	87.816	ENSBTAG00000013357	PUM3	100	87.037	Bos_taurus
ENSCAPG00000010592	-	78	32.359	WBGene00014165	puf-12	66	32.359	Caenorhabditis_elegans
ENSCAPG00000010592	-	99	84.853	ENSCJAG00000010917	PUM3	99	84.853	Callithrix_jacchus
ENSCAPG00000010592	-	100	85.516	ENSCAFG00000002035	PUM3	100	85.516	Canis_familiaris
ENSCAPG00000010592	-	100	85.362	ENSCAFG00020026867	PUM3	100	85.362	Canis_lupus_dingo
ENSCAPG00000010592	-	97	87.184	ENSCHIG00000021559	PUM3	100	86.265	Capra_hircus
ENSCAPG00000010592	-	99	85.957	ENSTSYG00000007481	PUM3	100	85.957	Carlito_syrichta
ENSCAPG00000010592	-	100	95.378	ENSCPOG00000008552	-	100	95.378	Cavia_porcellus
ENSCAPG00000010592	-	99	85.008	ENSCCAG00000032650	PUM3	99	85.008	Cebus_capucinus
ENSCAPG00000010592	-	99	86.708	ENSCATG00000024880	PUM3	99	86.708	Cercocebus_atys
ENSCAPG00000010592	-	100	89.831	ENSCLAG00000011892	PUM3	100	89.831	Chinchilla_lanigera
ENSCAPG00000010592	-	99	87.017	ENSCSAG00000008691	PUM3	100	86.883	Chlorocebus_sabaeus
ENSCAPG00000010592	-	98	65.403	ENSCHOG00000002535	PUM3	95	65.177	Choloepus_hoffmanni
ENSCAPG00000010592	-	99	69.753	ENSCPBG00000025470	PUM3	95	69.753	Chrysemys_picta_bellii
ENSCAPG00000010592	-	77	40.848	ENSCING00000024199	-	82	41.469	Ciona_intestinalis
ENSCAPG00000010592	-	91	38.158	ENSCSAVG00000006072	-	99	39.810	Ciona_savignyi
ENSCAPG00000010592	-	99	86.708	ENSCANG00000006142	PUM3	100	86.574	Colobus_angolensis_palliatus
ENSCAPG00000010592	-	100	85.978	ENSCGRG00001016402	Pum3	100	85.978	Cricetulus_griseus_chok1gshd
ENSCAPG00000010592	-	100	85.978	ENSCGRG00000010207	Pum3	100	85.978	Cricetulus_griseus_crigri
ENSCAPG00000010592	-	79	60.078	ENSCSEG00000001565	pum3	97	56.766	Cynoglossus_semilaevis
ENSCAPG00000010592	-	61	48.519	ENSCVAG00000006550	pum3	97	48.718	Cyprinodon_variegatus
ENSCAPG00000010592	-	95	64.809	ENSDARG00000087779	pum3	99	64.013	Danio_rerio
ENSCAPG00000010592	-	100	74.387	ENSDNOG00000008157	PUM3	70	74.769	Dasypus_novemcinctus
ENSCAPG00000010592	-	81	79.924	ENSETEG00000015331	PUM3	81	79.924	Echinops_telfairi
ENSCAPG00000010592	-	80	39.658	ENSEBUG00000011586	pum3	75	40.354	Eptatretus_burgeri
ENSCAPG00000010592	-	97	87.797	ENSEASG00005010350	PUM3	99	86.862	Equus_asinus_asinus
ENSCAPG00000010592	-	97	87.956	ENSECAG00000017193	PUM3	99	87.017	Equus_caballus
ENSCAPG00000010592	-	91	78.632	ENSEEUG00000010314	PUM3	99	77.667	Erinaceus_europaeus
ENSCAPG00000010592	-	88	64.076	ENSELUG00000002215	pum3	93	60.099	Esox_lucius
ENSCAPG00000010592	-	99	68.769	ENSFALG00000010509	PUM3	99	68.769	Ficedula_albicollis
ENSCAPG00000010592	-	100	89.214	ENSFDAG00000021027	PUM3	100	89.214	Fukomys_damarensis
ENSCAPG00000010592	-	86	56.919	ENSFHEG00000015576	pum3	99	56.919	Fundulus_heteroclitus
ENSCAPG00000010592	-	82	59.218	ENSGMOG00000014217	pum3	97	59.160	Gadus_morhua
ENSCAPG00000010592	-	95	70.894	ENSGALG00000010178	PUM3	100	68.405	Gallus_gallus
ENSCAPG00000010592	-	55	59.341	ENSGAFG00000001930	pum3	62	59.341	Gambusia_affinis
ENSCAPG00000010592	-	82	58.835	ENSGACG00000017878	pum3	96	58.935	Gasterosteus_aculeatus
ENSCAPG00000010592	-	99	70.216	ENSGAGG00000018983	PUM3	99	71.019	Gopherus_agassizii
ENSCAPG00000010592	-	99	86.862	ENSGGOG00000006143	PUM3	100	86.728	Gorilla_gorilla
ENSCAPG00000010592	-	92	50.906	ENSHBUG00000012903	pum3	98	49.038	Haplochromis_burtoni
ENSCAPG00000010592	-	100	89.060	ENSHGLG00000015868	-	100	89.060	Heterocephalus_glaber_female
ENSCAPG00000010592	-	100	89.060	ENSHGLG00100018825	PUM3	100	89.198	Heterocephalus_glaber_male
ENSCAPG00000010592	-	91	56.931	ENSHCOG00000010306	pum3	94	55.468	Hippocampus_comes
ENSCAPG00000010592	-	86	65.664	ENSIPUG00000024801	pum3	99	61.760	Ictalurus_punctatus
ENSCAPG00000010592	-	99	87.500	ENSSTOG00000009586	PUM3	100	87.365	Ictidomys_tridecemlineatus
ENSCAPG00000010592	-	99	84.259	ENSJJAG00000012563	Pum3	99	84.389	Jaculus_jaculus
ENSCAPG00000010592	-	99	52.914	ENSKMAG00000010277	pum3	82	59.238	Kryptolebias_marmoratus
ENSCAPG00000010592	-	92	55.351	ENSLBEG00000012213	pum3	96	52.804	Labrus_bergylta
ENSCAPG00000010592	-	99	64.297	ENSLACG00000008312	PUM3	99	64.297	Latimeria_chalumnae
ENSCAPG00000010592	-	92	67.279	ENSLOCG00000012529	pum3	93	67.391	Lepisosteus_oculatus
ENSCAPG00000010592	-	98	85.782	ENSLAFG00000017341	PUM3	100	84.900	Loxodonta_africana
ENSCAPG00000010592	-	99	86.862	ENSMFAG00000001430	PUM3	99	86.862	Macaca_fascicularis
ENSCAPG00000010592	-	99	86.862	ENSMMUG00000002362	PUM3	98	86.862	Macaca_mulatta
ENSCAPG00000010592	-	99	86.862	ENSMNEG00000035288	PUM3	99	86.862	Macaca_nemestrina
ENSCAPG00000010592	-	99	87.172	ENSMLEG00000034820	PUM3	100	87.037	Mandrillus_leucophaeus
ENSCAPG00000010592	-	87	57.549	ENSMAMG00000022861	pum3	98	53.560	Mastacembelus_armatus
ENSCAPG00000010592	-	98	54.242	ENSMZEG00005014205	pum3	94	53.191	Maylandia_zebra
ENSCAPG00000010592	-	99	63.914	ENSMGAG00000002255	PUM3	100	63.914	Meleagris_gallopavo
ENSCAPG00000010592	-	100	85.824	ENSMAUG00000009733	Pum3	100	85.824	Mesocricetus_auratus
ENSCAPG00000010592	-	99	87.481	ENSMICG00000045916	PUM3	87	87.481	Microcebus_murinus
ENSCAPG00000010592	-	100	85.824	ENSMOCG00000019519	-	100	85.824	Microtus_ochrogaster
ENSCAPG00000010592	-	99	81.790	ENSMOCG00000014830	-	100	81.327	Microtus_ochrogaster
ENSCAPG00000010592	-	91	53.028	ENSMMOG00000012184	pum3	98	52.373	Mola_mola
ENSCAPG00000010592	-	99	64.632	ENSMODG00000015417	PUM3	92	73.445	Monodelphis_domestica
ENSCAPG00000010592	-	82	58.769	ENSMALG00000022164	pum3	91	53.005	Monopterus_albus
ENSCAPG00000010592	-	100	84.746	MGP_CAROLIEiJ_G0022845	Pum3	100	84.746	Mus_caroli
ENSCAPG00000010592	-	100	84.746	ENSMUSG00000041360	Pum3	100	84.746	Mus_musculus
ENSCAPG00000010592	-	99	84.722	MGP_PahariEiJ_G0014338	Pum3	99	84.722	Mus_pahari
ENSCAPG00000010592	-	100	84.746	MGP_SPRETEiJ_G0023763	Pum3	100	84.746	Mus_spretus
ENSCAPG00000010592	-	97	84.810	ENSMPUG00000005125	PUM3	100	83.796	Mustela_putorius_furo
ENSCAPG00000010592	-	99	85.626	ENSMLUG00000002309	PUM3	99	85.626	Myotis_lucifugus
ENSCAPG00000010592	-	99	83.385	ENSNGAG00000019468	Pum3	100	83.385	Nannospalax_galili
ENSCAPG00000010592	-	93	54.112	ENSNBRG00000021370	pum3	95	53.388	Neolamprologus_brichardi
ENSCAPG00000010592	-	99	86.862	ENSNLEG00000008712	PUM3	99	86.862	Nomascus_leucogenys
ENSCAPG00000010592	-	70	60.841	ENSMEUG00000013606	-	92	58.797	Notamacropus_eugenii
ENSCAPG00000010592	-	77	81.395	ENSOPRG00000004225	-	79	81.395	Ochotona_princeps
ENSCAPG00000010592	-	100	88.752	ENSODEG00000003625	-	100	88.752	Octodon_degus
ENSCAPG00000010592	-	99	82.949	ENSODEG00000016477	-	100	82.949	Octodon_degus
ENSCAPG00000010592	-	86	57.932	ENSONIG00000012733	pum3	81	59.357	Oreochromis_niloticus
ENSCAPG00000010592	-	81	76.371	ENSOANG00000014995	PUM3	97	76.371	Ornithorhynchus_anatinus
ENSCAPG00000010592	-	99	86.111	ENSOCUG00000004189	-	100	86.111	Oryctolagus_cuniculus
ENSCAPG00000010592	-	99	85.736	ENSOCUG00000026104	-	100	85.736	Oryctolagus_cuniculus
ENSCAPG00000010592	-	91	52.980	ENSORLG00000014935	pum3	99	51.553	Oryzias_latipes
ENSCAPG00000010592	-	89	53.199	ENSORLG00020002841	pum3	99	51.322	Oryzias_latipes_hni
ENSCAPG00000010592	-	95	51.553	ENSORLG00015015906	pum3	98	54.930	Oryzias_latipes_hsok
ENSCAPG00000010592	-	90	54.003	ENSOMEG00000009427	pum3	98	50.153	Oryzias_melastigma
ENSCAPG00000010592	-	99	64.679	ENSOGAG00000033481	-	99	63.914	Otolemur_garnettii
ENSCAPG00000010592	-	99	85.516	ENSOGAG00000008125	-	100	85.516	Otolemur_garnettii
ENSCAPG00000010592	-	97	86.593	ENSOARG00000013337	PUM3	100	85.846	Ovis_aries
ENSCAPG00000010592	-	99	86.728	ENSPPAG00000041337	PUM3	100	86.595	Pan_paniscus
ENSCAPG00000010592	-	99	85.031	ENSPPRG00000000809	PUM3	100	85.031	Panthera_pardus
ENSCAPG00000010592	-	99	85.340	ENSPTIG00000021934	PUM3	100	85.340	Panthera_tigris_altaica
ENSCAPG00000010592	-	99	86.883	ENSPTRG00000020735	PUM3	100	86.749	Pan_troglodytes
ENSCAPG00000010592	-	99	87.346	ENSPANG00000025118	PUM3	100	87.346	Papio_anubis
ENSCAPG00000010592	-	99	62.253	ENSPKIG00000022249	pum3	96	64.765	Paramormyrops_kingsleyae
ENSCAPG00000010592	-	99	70.525	ENSPSIG00000016272	PUM3	100	70.525	Pelodiscus_sinensis
ENSCAPG00000010592	-	76	60.370	ENSPMGG00000021261	pum3	98	60.370	Periophthalmus_magnuspinnatus
ENSCAPG00000010592	-	99	70.724	ENSPEMG00000019340	-	100	79.787	Peromyscus_maniculatus_bairdii
ENSCAPG00000010592	-	99	70.854	ENSPCIG00000030598	PUM3	90	73.367	Phascolarctos_cinereus
ENSCAPG00000010592	-	91	55.574	ENSPFOG00000001719	pum3	98	54.606	Poecilia_formosa
ENSCAPG00000010592	-	91	55.172	ENSPLAG00000020010	pum3	95	55.008	Poecilia_latipinna
ENSCAPG00000010592	-	91	55.263	ENSPMEG00000017451	pum3	95	54.860	Poecilia_mexicana
ENSCAPG00000010592	-	99	86.708	ENSPPYG00000019255	PUM3	99	86.708	Pongo_abelii
ENSCAPG00000010592	-	100	73.190	ENSPCAG00000005797	PUM3	95	73.190	Procavia_capensis
ENSCAPG00000010592	-	99	86.728	ENSPCOG00000027325	PUM3	100	86.728	Propithecus_coquereli
ENSCAPG00000010592	-	100	83.359	ENSPVAG00000016135	PUM3	95	83.359	Pteropus_vampyrus
ENSCAPG00000010592	-	95	55.039	ENSPNYG00000016124	pum3	99	54.419	Pundamilia_nyererei
ENSCAPG00000010592	-	95	62.003	ENSPNAG00000026524	pum3	99	62.003	Pygocentrus_nattereri
ENSCAPG00000010592	-	99	83.333	ENSRNOG00000048356	RGD1308750	100	83.333	Rattus_norvegicus
ENSCAPG00000010592	-	99	83.333	ENSRNOG00000012574	Pum3	100	83.333	Rattus_norvegicus
ENSCAPG00000010592	-	99	86.399	ENSRBIG00000036924	PUM3	100	86.265	Rhinopithecus_bieti
ENSCAPG00000010592	-	99	86.399	ENSRROG00000041089	PUM3	100	86.265	Rhinopithecus_roxellana
ENSCAPG00000010592	-	99	86.862	ENSSBOG00000028066	PUM3	99	86.862	Saimiri_boliviensis_boliviensis
ENSCAPG00000010592	-	99	73.620	ENSSHAG00000003730	PUM3	100	73.620	Sarcophilus_harrisii
ENSCAPG00000010592	-	99	61.978	ENSSFOG00015018778	pum3	99	61.653	Scleropages_formosus
ENSCAPG00000010592	-	86	58.602	ENSSMAG00000013236	pum3	99	54.334	Scophthalmus_maximus
ENSCAPG00000010592	-	91	56.013	ENSSDUG00000001887	pum3	79	60.531	Seriola_dumerili
ENSCAPG00000010592	-	89	56.711	ENSSLDG00000015766	pum3	80	60.456	Seriola_lalandi_dorsalis
ENSCAPG00000010592	-	95	82.903	ENSSARG00000000579	PUM3	100	82.903	Sorex_araneus
ENSCAPG00000010592	-	97	67.943	ENSSPUG00000001707	PUM3	100	66.667	Sphenodon_punctatus
ENSCAPG00000010592	-	82	58.879	ENSSPAG00000003976	pum3	82	58.824	Stegastes_partitus
ENSCAPG00000010592	-	97	86.867	ENSSSCG00000005227	PUM3	99	88.095	Sus_scrofa
ENSCAPG00000010592	-	99	68.992	ENSTGUG00000005339	PUM3	99	68.992	Taeniopygia_guttata
ENSCAPG00000010592	-	95	54.504	ENSTRUG00000004074	pum3	79	60.878	Takifugu_rubripes
ENSCAPG00000010592	-	90	57.904	ENSTNIG00000010325	pum3	97	57.190	Tetraodon_nigroviridis
ENSCAPG00000010592	-	86	67.563	ENSTBEG00000013058	PUM3	86	67.563	Tupaia_belangeri
ENSCAPG00000010592	-	97	78.639	ENSTTRG00000001062	PUM3	96	77.812	Tursiops_truncatus
ENSCAPG00000010592	-	100	77.350	ENSUMAG00000018443	PUM3	99	81.439	Ursus_maritimus
ENSCAPG00000010592	-	100	85.385	ENSVPAG00000010766	PUM3	99	85.385	Vicugna_pacos
ENSCAPG00000010592	-	100	85.516	ENSVVUG00000006527	PUM3	100	85.516	Vulpes_vulpes
ENSCAPG00000010592	-	99	57.562	ENSXETG00000011707	pum3	99	57.879	Xenopus_tropicalis
ENSCAPG00000010592	-	91	53.833	ENSXCOG00000006725	pum3	87	56.679	Xiphophorus_couchianus
ENSCAPG00000010592	-	91	55.263	ENSXMAG00000002926	pum3	82	58.397	Xiphophorus_maculatus