EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000010762 (Gene tree)
Gene ID: -
Gene Symbol: SF1
Alias: ZCCHC25|ZFM1|ZNF162
Full Name: splicing factor 1
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Minus strand
Length: 10989 bases
Position: chrAVPZ01000367.1:5612329-5623317
Accession: 12950
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000009263	KH_1	PF00013.29	1.5e-07	1	1
ENSCAPP00000009263	zf-CCHC	PF00098.23	8.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000012976	SF1-201	1683	-	ENSCAPP00000009263	560 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000010762's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000010762's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000010762	SF1	65	81.818	ENSAPOG00000012341	sf1	58	76.794	Acanthochromis_polyacanthus
ENSCAPG00000010762	SF1	87	98.864	ENSAMEG00000017828	SF1	75	98.864	Ailuropoda_melanoleuca
ENSCAPG00000010762	SF1	65	84.196	ENSACIG00000016514	sf1	61	79.115	Amphilophus_citrinellus
ENSCAPG00000010762	SF1	65	81.818	ENSAOCG00000010934	sf1	58	76.998	Amphiprion_ocellaris
ENSCAPG00000010762	SF1	65	81.818	ENSAPEG00000009498	sf1	58	76.998	Amphiprion_percula
ENSCAPG00000010762	SF1	65	82.086	ENSATEG00000001894	sf1	59	77.724	Anabas_testudineus
ENSCAPG00000010762	SF1	100	97.857	ENSANAG00000026664	-	98	97.857	Aotus_nancymaae
ENSCAPG00000010762	SF1	77	88.837	ENSANAG00000022607	-	88	88.493	Aotus_nancymaae
ENSCAPG00000010762	SF1	65	84.824	ENSACLG00000007633	sf1	61	79.805	Astatotilapia_calliptera
ENSCAPG00000010762	SF1	66	86.096	ENSAMXG00000003630	sf1	50	77.724	Astyanax_mexicanus
ENSCAPG00000010762	SF1	79	98.636	ENSBTAG00000001035	SF1	71	99.535	Bos_taurus
ENSCAPG00000010762	SF1	100	78.889	ENSCJAG00000002780	SF1	98	78.889	Callithrix_jacchus
ENSCAPG00000010762	SF1	100	78.889	ENSCAFG00000014239	SF1	98	78.889	Canis_familiaris
ENSCAPG00000010762	SF1	100	78.889	ENSCAFG00020014381	SF1	98	78.889	Canis_lupus_dingo
ENSCAPG00000010762	SF1	79	98.636	ENSCHIG00000025867	SF1	80	98.636	Capra_hircus
ENSCAPG00000010762	SF1	54	99.281	ENSTSYG00000033618	SF1	88	99.281	Carlito_syrichta
ENSCAPG00000010762	SF1	100	79.365	ENSCPOG00000012290	SF1	82	99.091	Cavia_porcellus
ENSCAPG00000010762	SF1	87	98.636	ENSCCAG00000037881	SF1	93	99.495	Cebus_capucinus
ENSCAPG00000010762	SF1	73	86.486	ENSCCAG00000023781	-	82	86.413	Cebus_capucinus
ENSCAPG00000010762	SF1	87	98.636	ENSCATG00000011564	SF1	88	99.457	Cercocebus_atys
ENSCAPG00000010762	SF1	79	98.636	ENSCSAG00000007258	SF1	80	98.636	Chlorocebus_sabaeus
ENSCAPG00000010762	SF1	74	93.204	ENSCHOG00000006008	SF1	79	93.301	Choloepus_hoffmanni
ENSCAPG00000010762	SF1	76	90.071	ENSCPBG00000023763	SF1	52	90.172	Chrysemys_picta_bellii
ENSCAPG00000010762	SF1	65	59.946	ENSCING00000005564	-	74	60.372	Ciona_intestinalis
ENSCAPG00000010762	SF1	79	54.832	ENSCSAVG00000009055	-	88	54.743	Ciona_savignyi
ENSCAPG00000010762	SF1	100	78.889	ENSCANG00000042201	SF1	88	99.457	Colobus_angolensis_palliatus
ENSCAPG00000010762	SF1	100	97.321	ENSCGRG00001003677	Sf1	98	97.321	Cricetulus_griseus_chok1gshd
ENSCAPG00000010762	SF1	100	97.321	ENSCGRG00000001708	Sf1	100	97.321	Cricetulus_griseus_crigri
ENSCAPG00000010762	SF1	70	78.554	ENSCSEG00000014375	sf1	57	76.513	Cynoglossus_semilaevis
ENSCAPG00000010762	SF1	66	84.783	ENSCVAG00000001670	sf1	63	79.361	Cyprinodon_variegatus
ENSCAPG00000010762	SF1	69	80.867	ENSDARG00000008188	sf1	70	78.230	Danio_rerio
ENSCAPG00000010762	SF1	79	98.182	ENSDNOG00000001282	SF1	80	98.182	Dasypus_novemcinctus
ENSCAPG00000010762	SF1	100	78.730	ENSDORG00000016334	Sf1	98	78.730	Dipodomys_ordii
ENSCAPG00000010762	SF1	73	89.681	ENSETEG00000012830	SF1	57	88.206	Echinops_telfairi
ENSCAPG00000010762	SF1	79	98.182	ENSEASG00005018272	SF1	80	98.182	Equus_asinus_asinus
ENSCAPG00000010762	SF1	79	98.409	ENSECAG00000024544	SF1	80	98.409	Equus_caballus
ENSCAPG00000010762	SF1	70	98.982	ENSEEUG00000001058	SF1	100	98.982	Erinaceus_europaeus
ENSCAPG00000010762	SF1	65	81.720	ENSELUG00000013225	sf1	53	78.450	Esox_lucius
ENSCAPG00000010762	SF1	100	78.889	ENSFCAG00000012231	SF1	98	78.889	Felis_catus
ENSCAPG00000010762	SF1	100	98.393	ENSFDAG00000009833	SF1	100	98.393	Fukomys_damarensis
ENSCAPG00000010762	SF1	66	81.481	ENSFHEG00000022656	sf1	59	77.197	Fundulus_heteroclitus
ENSCAPG00000010762	SF1	56	88.308	ENSGMOG00000007469	sf1	59	88.308	Gadus_morhua
ENSCAPG00000010762	SF1	66	84.182	ENSGAFG00000019284	sf1	76	79.167	Gambusia_affinis
ENSCAPG00000010762	SF1	66	80.526	ENSGACG00000000826	sf1	66	76.355	Gasterosteus_aculeatus
ENSCAPG00000010762	SF1	76	89.835	ENSGAGG00000021691	SF1	57	90.909	Gopherus_agassizii
ENSCAPG00000010762	SF1	65	83.733	ENSHBUG00000011598	sf1	59	78.897	Haplochromis_burtoni
ENSCAPG00000010762	SF1	100	98.393	ENSHGLG00000009541	SF1	98	98.393	Heterocephalus_glaber_female
ENSCAPG00000010762	SF1	76	86.560	ENSHGLG00100008255	-	83	85.816	Heterocephalus_glaber_male
ENSCAPG00000010762	SF1	100	98.393	ENSHGLG00100013879	-	100	98.393	Heterocephalus_glaber_male
ENSCAPG00000010762	SF1	71	88.471	ENSHGLG00100008076	-	76	85.640	Heterocephalus_glaber_male
ENSCAPG00000010762	SF1	66	81.102	ENSHCOG00000011388	sf1	58	76.755	Hippocampus_comes
ENSCAPG00000010762	SF1	100	81.996	ENSSTOG00000024353	-	98	82.888	Ictidomys_tridecemlineatus
ENSCAPG00000010762	SF1	100	78.571	ENSSTOG00000009790	-	100	78.571	Ictidomys_tridecemlineatus
ENSCAPG00000010762	SF1	100	78.571	ENSJJAG00000011788	Sf1	98	78.571	Jaculus_jaculus
ENSCAPG00000010762	SF1	66	83.862	ENSKMAG00000005854	sf1	61	77.966	Kryptolebias_marmoratus
ENSCAPG00000010762	SF1	66	82.759	ENSLBEG00000019836	sf1	63	78.208	Labrus_bergylta
ENSCAPG00000010762	SF1	73	78.986	ENSLACG00000018493	SF1	73	79.024	Latimeria_chalumnae
ENSCAPG00000010762	SF1	66	84.309	ENSLOCG00000002130	sf1	58	79.753	Lepisosteus_oculatus
ENSCAPG00000010762	SF1	87	98.636	ENSLAFG00000007201	SF1	75	98.636	Loxodonta_africana
ENSCAPG00000010762	SF1	87	98.636	ENSMFAG00000033122	SF1	88	99.457	Macaca_fascicularis
ENSCAPG00000010762	SF1	100	78.889	ENSMMUG00000022606	SF1	99	99.012	Macaca_mulatta
ENSCAPG00000010762	SF1	87	98.636	ENSMNEG00000037901	SF1	88	99.457	Macaca_nemestrina
ENSCAPG00000010762	SF1	87	98.636	ENSMLEG00000040706	SF1	89	99.457	Mandrillus_leucophaeus
ENSCAPG00000010762	SF1	65	82.888	ENSMAMG00000001780	sf1	58	77.966	Mastacembelus_armatus
ENSCAPG00000010762	SF1	65	83.467	ENSMZEG00005009196	sf1	59	78.657	Maylandia_zebra
ENSCAPG00000010762	SF1	100	97.143	ENSMAUG00000014064	Sf1	98	97.143	Mesocricetus_auratus
ENSCAPG00000010762	SF1	100	78.855	ENSMICG00000001202	SF1	93	99.244	Microcebus_murinus
ENSCAPG00000010762	SF1	100	97.321	ENSMOCG00000022038	Sf1	98	97.321	Microtus_ochrogaster
ENSCAPG00000010762	SF1	65	82.016	ENSMMOG00000020474	sf1	59	76.601	Mola_mola
ENSCAPG00000010762	SF1	76	97.882	ENSMODG00000029407	SF1	92	97.882	Monodelphis_domestica
ENSCAPG00000010762	SF1	65	84.110	ENSMALG00000020521	sf1	67	76.812	Monopterus_albus
ENSCAPG00000010762	SF1	100	97.500	MGP_CAROLIEiJ_G0022607	Sf1	100	99.625	Mus_caroli
ENSCAPG00000010762	SF1	100	97.500	ENSMUSG00000024949	Sf1	100	99.625	Mus_musculus
ENSCAPG00000010762	SF1	100	97.321	MGP_PahariEiJ_G0014101	Sf1	100	99.625	Mus_pahari
ENSCAPG00000010762	SF1	100	97.500	MGP_SPRETEiJ_G0023518	Sf1	100	99.625	Mus_spretus
ENSCAPG00000010762	SF1	79	98.409	ENSMPUG00000012684	SF1	69	98.409	Mustela_putorius_furo
ENSCAPG00000010762	SF1	79	93.636	ENSMLUG00000029800	-	70	95.332	Myotis_lucifugus
ENSCAPG00000010762	SF1	79	98.636	ENSMLUG00000015217	-	69	98.636	Myotis_lucifugus
ENSCAPG00000010762	SF1	100	97.679	ENSNGAG00000005550	Sf1	98	97.679	Nannospalax_galili
ENSCAPG00000010762	SF1	65	84.824	ENSNBRG00000017606	sf1	60	80.392	Neolamprologus_brichardi
ENSCAPG00000010762	SF1	87	97.273	ENSNLEG00000005236	-	88	99.457	Nomascus_leucogenys
ENSCAPG00000010762	SF1	78	97.465	ENSMEUG00000013424	SF1	82	97.465	Notamacropus_eugenii
ENSCAPG00000010762	SF1	71	97.985	ENSOPRG00000005008	SF1	80	97.985	Ochotona_princeps
ENSCAPG00000010762	SF1	77	96.977	ENSODEG00000006102	-	68	96.977	Octodon_degus
ENSCAPG00000010762	SF1	65	83.733	ENSONIG00000015728	sf1	59	78.897	Oreochromis_niloticus
ENSCAPG00000010762	SF1	64	87.709	ENSOANG00000002909	SF1	84	86.257	Ornithorhynchus_anatinus
ENSCAPG00000010762	SF1	100	79.048	ENSOCUG00000026486	SF1	99	79.048	Oryctolagus_cuniculus
ENSCAPG00000010762	SF1	68	80.879	ENSORLG00000011853	sf1	58	76.998	Oryzias_latipes
ENSCAPG00000010762	SF1	68	80.879	ENSORLG00020011834	sf1	58	76.998	Oryzias_latipes_hni
ENSCAPG00000010762	SF1	66	80.688	ENSORLG00015012855	sf1	58	76.755	Oryzias_latipes_hsok
ENSCAPG00000010762	SF1	66	82.011	ENSOMEG00000005210	sf1	59	77.966	Oryzias_melastigma
ENSCAPG00000010762	SF1	100	79.014	ENSOGAG00000016196	SF1	98	79.014	Otolemur_garnettii
ENSCAPG00000010762	SF1	79	98.636	ENSOARG00000009166	SF1	77	98.636	Ovis_aries
ENSCAPG00000010762	SF1	100	78.662	ENSPPAG00000002799	-	95	99.495	Pan_paniscus
ENSCAPG00000010762	SF1	100	78.889	ENSPPRG00000013566	SF1	98	78.889	Panthera_pardus
ENSCAPG00000010762	SF1	100	90.179	ENSPTIG00000016141	SF1	98	89.223	Panthera_tigris_altaica
ENSCAPG00000010762	SF1	100	78.889	ENSPTRG00000003846	SF1	97	99.518	Pan_troglodytes
ENSCAPG00000010762	SF1	87	98.636	ENSPANG00000020754	SF1	88	99.457	Papio_anubis
ENSCAPG00000010762	SF1	60	78.363	ENSPKIG00000012116	sf1	88	74.499	Paramormyrops_kingsleyae
ENSCAPG00000010762	SF1	57	88.125	ENSPSIG00000003610	SF1	59	88.158	Pelodiscus_sinensis
ENSCAPG00000010762	SF1	100	97.857	ENSPEMG00000010463	Sf1	98	97.857	Peromyscus_maniculatus_bairdii
ENSCAPG00000010762	SF1	100	77.424	ENSPCIG00000018173	SF1	98	77.424	Phascolarctos_cinereus
ENSCAPG00000010762	SF1	66	85.326	ENSPFOG00000013683	sf1	66	79.361	Poecilia_formosa
ENSCAPG00000010762	SF1	66	83.820	ENSPLAG00000018076	sf1	61	77.885	Poecilia_latipinna
ENSCAPG00000010762	SF1	66	83.820	ENSPMEG00000005726	sf1	62	78.125	Poecilia_mexicana
ENSCAPG00000010762	SF1	66	83.289	ENSPREG00000004155	sf1	59	77.644	Poecilia_reticulata
ENSCAPG00000010762	SF1	100	78.730	ENSPPYG00000003098	-	83	98.636	Pongo_abelii
ENSCAPG00000010762	SF1	79	98.409	ENSPCAG00000013631	SF1	66	98.409	Procavia_capensis
ENSCAPG00000010762	SF1	87	98.413	ENSPCOG00000027546	SF1	93	99.244	Propithecus_coquereli
ENSCAPG00000010762	SF1	79	98.182	ENSPVAG00000016938	SF1	66	98.182	Pteropus_vampyrus
ENSCAPG00000010762	SF1	65	83.467	ENSPNYG00000004673	sf1	59	78.657	Pundamilia_nyererei
ENSCAPG00000010762	SF1	66	85.600	ENSPNAG00000013072	sf1	59	78.935	Pygocentrus_nattereri
ENSCAPG00000010762	SF1	79	97.955	ENSRNOG00000021085	Sf1	74	97.587	Rattus_norvegicus
ENSCAPG00000010762	SF1	100	90.179	ENSRBIG00000042818	SF1	89	99.191	Rhinopithecus_bieti
ENSCAPG00000010762	SF1	100	97.321	ENSRROG00000045655	SF1	99	97.321	Rhinopithecus_roxellana
ENSCAPG00000010762	SF1	52	43.421	YLR116W	MSL5	61	43.182	Saccharomyces_cerevisiae
ENSCAPG00000010762	SF1	93	78.503	ENSSBOG00000022267	-	97	80.988	Saimiri_boliviensis_boliviensis
ENSCAPG00000010762	SF1	71	93.500	ENSSHAG00000006841	SF1	73	94.750	Sarcophilus_harrisii
ENSCAPG00000010762	SF1	70	80.653	ENSSFOG00015021978	sf1	55	75.598	Scleropages_formosus
ENSCAPG00000010762	SF1	72	76.247	ENSSMAG00000007549	sf1	62	76.667	Scophthalmus_maximus
ENSCAPG00000010762	SF1	65	81.283	ENSSDUG00000003903	sf1	61	77.240	Seriola_dumerili
ENSCAPG00000010762	SF1	65	81.283	ENSSLDG00000013075	sf1	59	77.240	Seriola_lalandi_dorsalis
ENSCAPG00000010762	SF1	78	94.931	ENSSARG00000008180	SF1	84	94.931	Sorex_araneus
ENSCAPG00000010762	SF1	73	85.981	ENSSPUG00000012907	SF1	68	85.922	Sphenodon_punctatus
ENSCAPG00000010762	SF1	65	81.818	ENSSPAG00000019060	sf1	58	76.998	Stegastes_partitus
ENSCAPG00000010762	SF1	100	78.730	ENSSSCG00000013021	SF1	80	98.636	Sus_scrofa
ENSCAPG00000010762	SF1	68	72.123	ENSTNIG00000004820	sf1	77	68.932	Tetraodon_nigroviridis
ENSCAPG00000010762	SF1	73	91.646	ENSTBEG00000013133	SF1	59	91.646	Tupaia_belangeri
ENSCAPG00000010762	SF1	79	93.409	ENSTTRG00000008857	SF1	80	94.186	Tursiops_truncatus
ENSCAPG00000010762	SF1	60	93.750	ENSUAMG00000011977	SF1	63	93.750	Ursus_americanus
ENSCAPG00000010762	SF1	100	89.107	ENSUMAG00000007268	SF1	98	89.107	Ursus_maritimus
ENSCAPG00000010762	SF1	61	100.000	ENSVPAG00000011912	SF1	64	100.000	Vicugna_pacos
ENSCAPG00000010762	SF1	79	98.636	ENSVVUG00000028585	SF1	80	98.636	Vulpes_vulpes
ENSCAPG00000010762	SF1	77	80.645	ENSXETG00000008434	sf1	67	81.863	Xenopus_tropicalis
ENSCAPG00000010762	SF1	65	85.205	ENSXCOG00000003704	sf1	75	80.941	Xiphophorus_couchianus
ENSCAPG00000010762	SF1	66	83.069	ENSXMAG00000007822	sf1	61	79.376	Xiphophorus_maculatus