EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000010786 (Gene tree)
Gene ID: -
Gene Symbol: DDB1
Alias: -
Full Name: damage specific DNA binding protein 1
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 20692 bases
Position: chrAVPZ01000622.1:9843776-9864467
Accession: 2717
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000009314	CPSF_A	PF03178.15	2e-86	1	1
ENSCAPP00000009305	CPSF_A	PF03178.15	3.7e-81	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000013029	DDB1-202	3360	-	ENSCAPP00000009314	1119 (aa)	-	-
ENSCAPT00000013019	DDB1-201	3354	-	ENSCAPP00000009305	1117 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000010786's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000010786's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000010786	DDB1	100	99.106	ENSG00000167986	DDB1	100	98.788	Homo_sapiens
ENSCAPG00000010786	DDB1	98	91.484	ENSAPOG00000005036	ddb1	98	91.449	Acanthochromis_polyacanthus
ENSCAPG00000010786	DDB1	100	99.196	ENSAMEG00000016518	DDB1	98	99.196	Ailuropoda_melanoleuca
ENSCAPG00000010786	DDB1	86	91.554	ENSACIG00000020624	ddb1	98	91.554	Amphilophus_citrinellus
ENSCAPG00000010786	DDB1	100	91.153	ENSAOCG00000003066	ddb1	98	91.153	Amphiprion_ocellaris
ENSCAPG00000010786	DDB1	100	91.242	ENSAPEG00000000092	ddb1	98	91.242	Amphiprion_percula
ENSCAPG00000010786	DDB1	94	91.461	ENSATEG00000020571	ddb1	95	91.461	Anabas_testudineus
ENSCAPG00000010786	DDB1	100	96.078	ENSAPLG00000007174	DDB1	99	96.078	Anas_platyrhynchos
ENSCAPG00000010786	DDB1	100	96.783	ENSACAG00000017758	DDB1	98	96.783	Anolis_carolinensis
ENSCAPG00000010786	DDB1	100	99.106	ENSANAG00000021878	DDB1	98	99.106	Aotus_nancymaae
ENSCAPG00000010786	DDB1	100	91.332	ENSACLG00000012401	ddb1	98	91.332	Astatotilapia_calliptera
ENSCAPG00000010786	DDB1	100	99.017	ENSBTAG00000021569	DDB1	91	99.017	Bos_taurus
ENSCAPG00000010786	DDB1	100	37.021	WBGene00010890	ddb-1	98	36.751	Caenorhabditis_elegans
ENSCAPG00000010786	DDB1	100	99.106	ENSCJAG00000019319	DDB1	98	99.106	Callithrix_jacchus
ENSCAPG00000010786	DDB1	100	99.196	ENSCAFG00000016264	DDB1	98	99.196	Canis_familiaris
ENSCAPG00000010786	DDB1	94	98.956	ENSCAFG00020012722	DDB1	97	98.956	Canis_lupus_dingo
ENSCAPG00000010786	DDB1	100	99.017	ENSCHIG00000014969	DDB1	98	99.017	Capra_hircus
ENSCAPG00000010786	DDB1	100	98.749	ENSTSYG00000008027	DDB1	98	98.749	Carlito_syrichta
ENSCAPG00000010786	DDB1	100	100.000	ENSCPOG00000009956	DDB1	99	99.100	Cavia_porcellus
ENSCAPG00000010786	DDB1	100	99.106	ENSCCAG00000035883	DDB1	98	99.106	Cebus_capucinus
ENSCAPG00000010786	DDB1	100	96.552	ENSCATG00000044495	DDB1	98	96.552	Cercocebus_atys
ENSCAPG00000010786	DDB1	100	99.821	ENSCLAG00000004126	DDB1	98	99.821	Chinchilla_lanigera
ENSCAPG00000010786	DDB1	100	99.106	ENSCSAG00000006392	DDB1	98	99.106	Chlorocebus_sabaeus
ENSCAPG00000010786	DDB1	87	92.235	ENSCHOG00000011377	DDB1	89	91.288	Choloepus_hoffmanni
ENSCAPG00000010786	DDB1	100	97.140	ENSCPBG00000017728	DDB1	98	97.140	Chrysemys_picta_bellii
ENSCAPG00000010786	DDB1	100	61.627	ENSCING00000007437	-	98	61.538	Ciona_intestinalis
ENSCAPG00000010786	DDB1	96	60.276	ENSCSAVG00000004783	-	100	60.276	Ciona_savignyi
ENSCAPG00000010786	DDB1	100	99.106	ENSCANG00000019948	DDB1	98	99.106	Colobus_angolensis_palliatus
ENSCAPG00000010786	DDB1	100	99.285	ENSCGRG00001016599	Ddb1	98	99.285	Cricetulus_griseus_chok1gshd
ENSCAPG00000010786	DDB1	100	99.285	ENSCGRG00000013427	Ddb1	98	99.285	Cricetulus_griseus_crigri
ENSCAPG00000010786	DDB1	93	91.058	ENSCSEG00000012499	ddb1	98	89.452	Cynoglossus_semilaevis
ENSCAPG00000010786	DDB1	94	91.160	ENSCVAG00000019531	ddb1	97	91.160	Cyprinodon_variegatus
ENSCAPG00000010786	DDB1	100	87.911	ENSDARG00000074431	ddb1	98	88.256	Danio_rerio
ENSCAPG00000010786	DDB1	94	98.767	ENSDNOG00000014884	DDB1	95	98.767	Dasypus_novemcinctus
ENSCAPG00000010786	DDB1	83	99.000	ENSDORG00000000127	Ddb1	99	98.229	Dipodomys_ordii
ENSCAPG00000010786	DDB1	100	60.676	FBgn0260962	pic	98	60.463	Drosophila_melanogaster
ENSCAPG00000010786	DDB1	70	99.142	ENSETEG00000001053	-	69	99.142	Echinops_telfairi
ENSCAPG00000010786	DDB1	78	84.677	ENSEBUG00000014593	ddb1	95	84.677	Eptatretus_burgeri
ENSCAPG00000010786	DDB1	100	99.017	ENSEASG00005008184	DDB1	98	99.017	Equus_asinus_asinus
ENSCAPG00000010786	DDB1	100	98.928	ENSECAG00000012136	DDB1	98	98.928	Equus_caballus
ENSCAPG00000010786	DDB1	80	96.970	ENSEEUG00000003194	DDB1	79	96.970	Erinaceus_europaeus
ENSCAPG00000010786	DDB1	100	91.063	ENSELUG00000023868	ddb1	98	91.063	Esox_lucius
ENSCAPG00000010786	DDB1	100	99.196	ENSFCAG00000029716	DDB1	98	99.196	Felis_catus
ENSCAPG00000010786	DDB1	100	96.613	ENSFALG00000011981	DDB1	98	96.613	Ficedula_albicollis
ENSCAPG00000010786	DDB1	100	99.196	ENSFDAG00000005128	DDB1	98	99.196	Fukomys_damarensis
ENSCAPG00000010786	DDB1	90	92.800	ENSFHEG00000022133	ddb1	98	92.800	Fundulus_heteroclitus
ENSCAPG00000010786	DDB1	80	94.314	ENSGMOG00000019386	ddb1	94	94.314	Gadus_morhua
ENSCAPG00000010786	DDB1	100	96.425	ENSGALG00000042333	DDB1	98	96.425	Gallus_gallus
ENSCAPG00000010786	DDB1	94	91.160	ENSGAFG00000013142	ddb1	97	91.160	Gambusia_affinis
ENSCAPG00000010786	DDB1	96	90.187	ENSGACG00000017182	ddb1	98	90.187	Gasterosteus_aculeatus
ENSCAPG00000010786	DDB1	97	97.140	ENSGAGG00000014124	DDB1	100	97.140	Gopherus_agassizii
ENSCAPG00000010786	DDB1	100	99.106	ENSGGOG00000004052	DDB1	98	99.106	Gorilla_gorilla
ENSCAPG00000010786	DDB1	100	91.332	ENSHBUG00000008873	ddb1	100	91.052	Haplochromis_burtoni
ENSCAPG00000010786	DDB1	100	99.106	ENSHGLG00000018430	DDB1	98	99.106	Heterocephalus_glaber_female
ENSCAPG00000010786	DDB1	100	98.034	ENSHGLG00100014475	DDB1	98	98.034	Heterocephalus_glaber_male
ENSCAPG00000010786	DDB1	94	90.900	ENSHCOG00000018670	ddb1	97	90.900	Hippocampus_comes
ENSCAPG00000010786	DDB1	100	90.527	ENSIPUG00000005612	DDB1	98	90.527	Ictalurus_punctatus
ENSCAPG00000010786	DDB1	100	99.106	ENSSTOG00000007552	DDB1	98	99.106	Ictidomys_tridecemlineatus
ENSCAPG00000010786	DDB1	100	98.928	ENSJJAG00000017769	Ddb1	98	98.928	Jaculus_jaculus
ENSCAPG00000010786	DDB1	94	91.065	ENSKMAG00000002315	ddb1	98	91.065	Kryptolebias_marmoratus
ENSCAPG00000010786	DDB1	86	91.658	ENSLBEG00000017065	ddb1	99	91.658	Labrus_bergylta
ENSCAPG00000010786	DDB1	100	93.310	ENSLACG00000017611	DDB1	98	93.310	Latimeria_chalumnae
ENSCAPG00000010786	DDB1	93	82.193	ENSLOCG00000000012	ddb1	99	82.193	Lepisosteus_oculatus
ENSCAPG00000010786	DDB1	100	98.928	ENSLAFG00000011513	DDB1	98	98.928	Loxodonta_africana
ENSCAPG00000010786	DDB1	100	99.106	ENSMFAG00000042035	DDB1	98	99.106	Macaca_fascicularis
ENSCAPG00000010786	DDB1	99	99.099	ENSMMUG00000002691	DDB1	98	99.099	Macaca_mulatta
ENSCAPG00000010786	DDB1	100	99.106	ENSMNEG00000031559	DDB1	98	99.106	Macaca_nemestrina
ENSCAPG00000010786	DDB1	100	99.106	ENSMLEG00000044136	DDB1	98	99.106	Mandrillus_leucophaeus
ENSCAPG00000010786	DDB1	100	91.332	ENSMAMG00000014372	ddb1	98	91.332	Mastacembelus_armatus
ENSCAPG00000010786	DDB1	100	91.242	ENSMZEG00005013835	ddb1	98	91.242	Maylandia_zebra
ENSCAPG00000010786	DDB1	96	95.810	ENSMGAG00000004990	DDB1	100	95.810	Meleagris_gallopavo
ENSCAPG00000010786	DDB1	100	99.285	ENSMAUG00000012926	Ddb1	98	99.285	Mesocricetus_auratus
ENSCAPG00000010786	DDB1	100	99.106	ENSMICG00000013703	DDB1	98	99.106	Microcebus_murinus
ENSCAPG00000010786	DDB1	100	99.196	ENSMOCG00000020499	Ddb1	98	99.196	Microtus_ochrogaster
ENSCAPG00000010786	DDB1	86	91.554	ENSMMOG00000001758	ddb1	98	91.554	Mola_mola
ENSCAPG00000010786	DDB1	100	88.546	ENSMODG00000020353	DDB1	98	88.546	Monodelphis_domestica
ENSCAPG00000010786	DDB1	100	91.332	ENSMALG00000014071	ddb1	98	91.332	Monopterus_albus
ENSCAPG00000010786	DDB1	100	99.196	MGP_CAROLIEiJ_G0022695	Ddb1	98	99.196	Mus_caroli
ENSCAPG00000010786	DDB1	100	99.017	ENSMUSG00000024740	Ddb1	98	99.017	Mus_musculus
ENSCAPG00000010786	DDB1	100	99.196	MGP_PahariEiJ_G0014189	Ddb1	98	99.196	Mus_pahari
ENSCAPG00000010786	DDB1	100	99.106	MGP_SPRETEiJ_G0023609	Ddb1	98	99.106	Mus_spretus
ENSCAPG00000010786	DDB1	100	95.800	ENSMPUG00000014200	DDB1	98	95.800	Mustela_putorius_furo
ENSCAPG00000010786	DDB1	100	98.749	ENSMLUG00000013232	DDB1	98	98.749	Myotis_lucifugus
ENSCAPG00000010786	DDB1	100	99.017	ENSNGAG00000009384	Ddb1	98	99.017	Nannospalax_galili
ENSCAPG00000010786	DDB1	100	91.421	ENSNBRG00000019581	ddb1	98	91.421	Neolamprologus_brichardi
ENSCAPG00000010786	DDB1	100	95.933	ENSNLEG00000002022	DDB1	98	95.933	Nomascus_leucogenys
ENSCAPG00000010786	DDB1	92	99.296	ENSMEUG00000001099	DDB1	92	99.296	Notamacropus_eugenii
ENSCAPG00000010786	DDB1	92	90.495	ENSOPRG00000008254	DDB1	90	90.495	Ochotona_princeps
ENSCAPG00000010786	DDB1	100	99.464	ENSODEG00000002419	DDB1	98	99.464	Octodon_degus
ENSCAPG00000010786	DDB1	100	91.332	ENSONIG00000005804	ddb1	98	91.332	Oreochromis_niloticus
ENSCAPG00000010786	DDB1	92	97.578	ENSOANG00000004897	DDB1	100	97.578	Ornithorhynchus_anatinus
ENSCAPG00000010786	DDB1	100	99.106	ENSOCUG00000001667	DDB1	98	99.106	Oryctolagus_cuniculus
ENSCAPG00000010786	DDB1	96	89.626	ENSORLG00000001399	ddb1	96	90.882	Oryzias_latipes
ENSCAPG00000010786	DDB1	96	89.533	ENSORLG00020001277	ddb1	95	89.533	Oryzias_latipes_hni
ENSCAPG00000010786	DDB1	94	90.702	ENSORLG00015002080	ddb1	97	90.702	Oryzias_latipes_hsok
ENSCAPG00000010786	DDB1	96	89.498	ENSOMEG00000006181	ddb1	97	89.498	Oryzias_melastigma
ENSCAPG00000010786	DDB1	100	98.928	ENSOGAG00000016103	DDB1	98	98.928	Otolemur_garnettii
ENSCAPG00000010786	DDB1	98	99.002	ENSOARG00000011716	DDB1	96	99.002	Ovis_aries
ENSCAPG00000010786	DDB1	100	99.106	ENSPPAG00000035343	DDB1	98	99.106	Pan_paniscus
ENSCAPG00000010786	DDB1	100	99.196	ENSPPRG00000013300	DDB1	98	99.196	Panthera_pardus
ENSCAPG00000010786	DDB1	100	99.196	ENSPTIG00000006909	DDB1	98	99.196	Panthera_tigris_altaica
ENSCAPG00000010786	DDB1	100	99.106	ENSPTRG00000003737	DDB1	98	99.106	Pan_troglodytes
ENSCAPG00000010786	DDB1	100	99.106	ENSPANG00000000242	DDB1	98	99.106	Papio_anubis
ENSCAPG00000010786	DDB1	94	91.160	ENSPKIG00000019213	ddb1	92	91.160	Paramormyrops_kingsleyae
ENSCAPG00000010786	DDB1	100	96.789	ENSPSIG00000013275	DDB1	99	96.789	Pelodiscus_sinensis
ENSCAPG00000010786	DDB1	86	91.241	ENSPMGG00000021179	ddb1	98	91.241	Periophthalmus_magnuspinnatus
ENSCAPG00000010786	DDB1	100	99.285	ENSPEMG00000012241	Ddb1	98	99.285	Peromyscus_maniculatus_bairdii
ENSCAPG00000010786	DDB1	91	86.824	ENSPMAG00000008479	ddb1	99	86.824	Petromyzon_marinus
ENSCAPG00000010786	DDB1	100	98.570	ENSPCIG00000002643	DDB1	98	98.570	Phascolarctos_cinereus
ENSCAPG00000010786	DDB1	100	90.714	ENSPFOG00000002768	ddb1	98	90.714	Poecilia_formosa
ENSCAPG00000010786	DDB1	100	90.527	ENSPLAG00000017227	ddb1	98	90.527	Poecilia_latipinna
ENSCAPG00000010786	DDB1	100	90.527	ENSPMEG00000011398	ddb1	98	90.527	Poecilia_mexicana
ENSCAPG00000010786	DDB1	94	91.082	ENSPREG00000004440	ddb1	96	91.082	Poecilia_reticulata
ENSCAPG00000010786	DDB1	100	94.133	ENSPPYG00000003193	DDB1	98	94.133	Pongo_abelii
ENSCAPG00000010786	DDB1	84	98.955	ENSPCAG00000011040	DDB1	83	98.955	Procavia_capensis
ENSCAPG00000010786	DDB1	100	97.502	ENSPCOG00000015176	DDB1	98	97.502	Propithecus_coquereli
ENSCAPG00000010786	DDB1	100	99.017	ENSPVAG00000003847	DDB1	98	99.017	Pteropus_vampyrus
ENSCAPG00000010786	DDB1	50	90.214	ENSPNYG00000010482	ddb1	100	90.214	Pundamilia_nyererei
ENSCAPG00000010786	DDB1	94	91.065	ENSPNAG00000006635	ddb1	95	91.065	Pygocentrus_nattereri
ENSCAPG00000010786	DDB1	100	99.196	ENSRNOG00000020715	Ddb1	98	99.196	Rattus_norvegicus
ENSCAPG00000010786	DDB1	100	99.106	ENSRBIG00000033611	DDB1	98	99.106	Rhinopithecus_bieti
ENSCAPG00000010786	DDB1	100	99.106	ENSRROG00000041407	DDB1	98	99.106	Rhinopithecus_roxellana
ENSCAPG00000010786	DDB1	100	99.017	ENSSBOG00000019775	DDB1	98	99.017	Saimiri_boliviensis_boliviensis
ENSCAPG00000010786	DDB1	96	96.355	ENSSHAG00000011600	DDB1	100	96.355	Sarcophilus_harrisii
ENSCAPG00000010786	DDB1	94	91.469	ENSSFOG00015011151	ddb1	95	91.469	Scleropages_formosus
ENSCAPG00000010786	DDB1	100	90.795	ENSSMAG00000009495	ddb1	98	90.795	Scophthalmus_maximus
ENSCAPG00000010786	DDB1	100	91.242	ENSSDUG00000004642	ddb1	98	91.242	Seriola_dumerili
ENSCAPG00000010786	DDB1	100	91.242	ENSSLDG00000015804	ddb1	98	91.242	Seriola_lalandi_dorsalis
ENSCAPG00000010786	DDB1	65	100.000	ENSSARG00000003290	-	66	100.000	Sorex_araneus
ENSCAPG00000010786	DDB1	100	97.140	ENSSPUG00000019338	DDB1	98	97.140	Sphenodon_punctatus
ENSCAPG00000010786	DDB1	94	91.366	ENSSPAG00000009888	ddb1	97	91.366	Stegastes_partitus
ENSCAPG00000010786	DDB1	100	98.123	ENSSSCG00000013094	DDB1	98	98.123	Sus_scrofa
ENSCAPG00000010786	DDB1	100	96.425	ENSTGUG00000006414	DDB1	98	96.425	Taeniopygia_guttata
ENSCAPG00000010786	DDB1	94	90.114	ENSTRUG00000016682	ddb1	97	90.114	Takifugu_rubripes
ENSCAPG00000010786	DDB1	89	85.030	ENSTNIG00000009565	ddb1	99	85.030	Tetraodon_nigroviridis
ENSCAPG00000010786	DDB1	94	94.386	ENSTTRG00000011055	DDB1	94	94.386	Tursiops_truncatus
ENSCAPG00000010786	DDB1	94	98.956	ENSUAMG00000017793	DDB1	92	98.956	Ursus_americanus
ENSCAPG00000010786	DDB1	94	98.956	ENSUMAG00000011788	DDB1	96	98.956	Ursus_maritimus
ENSCAPG00000010786	DDB1	92	99.020	ENSVPAG00000007963	DDB1	92	99.020	Vicugna_pacos
ENSCAPG00000010786	DDB1	100	99.106	ENSVVUG00000004987	DDB1	98	99.106	Vulpes_vulpes
ENSCAPG00000010786	DDB1	100	93.054	ENSXETG00000008820	ddb1	98	93.054	Xenopus_tropicalis
ENSCAPG00000010786	DDB1	86	91.032	ENSXCOG00000013956	ddb1	98	91.032	Xiphophorus_couchianus
ENSCAPG00000010786	DDB1	94	90.970	ENSXMAG00000000022	ddb1	97	90.970	Xiphophorus_maculatus