EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000010831 (Gene tree)
Gene ID: -
Gene Symbol: TARBP1
Alias: TRM3|TRMT3|TRP-185
Full Name: TAR (HIV-1) RNA binding protein 1
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Minus strand
Length: 54499 bases
Position: chrAVPZ01000078.1:3699617-3754115
Accession: 11568
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000009356	SpoU_methylase	PF00588.19	5.2e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000013072	TARBP1-201	3546	-	ENSCAPP00000009356	1181 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000010831's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000010831's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000010831	TARBP1	99	69.044	ENSG00000059588	TARBP1	79	69.201	Homo_sapiens
ENSCAPG00000010831	TARBP1	99	42.704	ENSAPOG00000016419	si:dkey-85a20.4	79	42.627	Acanthochromis_polyacanthus
ENSCAPG00000010831	TARBP1	99	69.405	ENSAMEG00000003359	TARBP1	93	69.225	Ailuropoda_melanoleuca
ENSCAPG00000010831	TARBP1	99	43.166	ENSATEG00000020266	si:dkey-85a20.4	78	43.012	Anabas_testudineus
ENSCAPG00000010831	TARBP1	99	57.176	ENSAPLG00000007666	TARBP1	97	57.109	Anas_platyrhynchos
ENSCAPG00000010831	TARBP1	98	53.597	ENSACAG00000001142	TARBP1	79	53.555	Anolis_carolinensis
ENSCAPG00000010831	TARBP1	99	68.164	ENSANAG00000022031	TARBP1	81	68.085	Aotus_nancymaae
ENSCAPG00000010831	TARBP1	100	68.652	ENSBTAG00000004517	TARBP1	77	71.743	Bos_taurus
ENSCAPG00000010831	TARBP1	99	68.574	ENSCJAG00000018155	TARBP1	79	68.833	Callithrix_jacchus
ENSCAPG00000010831	TARBP1	99	69.436	ENSCAFG00000011533	TARBP1	90	69.436	Canis_familiaris
ENSCAPG00000010831	TARBP1	99	69.490	ENSCAFG00020027141	TARBP1	79	69.490	Canis_lupus_dingo
ENSCAPG00000010831	TARBP1	99	67.559	ENSCHIG00000011437	TARBP1	78	67.612	Capra_hircus
ENSCAPG00000010831	TARBP1	99	68.146	ENSTSYG00000010382	TARBP1	94	68.224	Carlito_syrichta
ENSCAPG00000010831	TARBP1	100	85.658	ENSCPOG00000013995	TARBP1	80	85.658	Cavia_porcellus
ENSCAPG00000010831	TARBP1	99	69.375	ENSCCAG00000037278	TARBP1	77	74.958	Cebus_capucinus
ENSCAPG00000010831	TARBP1	99	68.906	ENSCATG00000011754	TARBP1	79	68.906	Cercocebus_atys
ENSCAPG00000010831	TARBP1	100	80.911	ENSCLAG00000003655	TARBP1	94	80.911	Chinchilla_lanigera
ENSCAPG00000010831	TARBP1	99	69.219	ENSCSAG00000010100	TARBP1	99	69.219	Chlorocebus_sabaeus
ENSCAPG00000010831	TARBP1	92	59.312	ENSCPBG00000005587	TARBP1	78	58.844	Chrysemys_picta_bellii
ENSCAPG00000010831	TARBP1	99	68.906	ENSCANG00000034343	TARBP1	94	68.906	Colobus_angolensis_palliatus
ENSCAPG00000010831	TARBP1	99	69.992	ENSCGRG00001016690	Tarbp1	80	69.835	Cricetulus_griseus_chok1gshd
ENSCAPG00000010831	TARBP1	99	69.992	ENSCGRG00000016893	Tarbp1	86	69.835	Cricetulus_griseus_crigri
ENSCAPG00000010831	TARBP1	99	40.687	ENSCSEG00000005255	si:dkey-85a20.4	76	47.027	Cynoglossus_semilaevis
ENSCAPG00000010831	TARBP1	99	43.444	ENSDARG00000079055	si:dkey-85a20.4	99	51.483	Danio_rerio
ENSCAPG00000010831	TARBP1	99	68.433	ENSDNOG00000008637	TARBP1	77	68.355	Dasypus_novemcinctus
ENSCAPG00000010831	TARBP1	99	66.140	ENSDORG00000007984	Tarbp1	98	66.377	Dipodomys_ordii
ENSCAPG00000010831	TARBP1	99	69.671	ENSEASG00005000252	TARBP1	79	69.545	Equus_asinus_asinus
ENSCAPG00000010831	TARBP1	99	69.279	ENSECAG00000023673	TARBP1	78	69.255	Equus_caballus
ENSCAPG00000010831	TARBP1	99	41.414	ENSELUG00000012193	si:dkey-85a20.4	79	41.647	Esox_lucius
ENSCAPG00000010831	TARBP1	99	65.292	ENSFCAG00000014183	TARBP1	78	64.867	Felis_catus
ENSCAPG00000010831	TARBP1	99	57.232	ENSFALG00000013565	TARBP1	97	57.110	Ficedula_albicollis
ENSCAPG00000010831	TARBP1	100	73.692	ENSFDAG00000001308	TARBP1	99	73.692	Fukomys_damarensis
ENSCAPG00000010831	TARBP1	99	36.019	ENSFHEG00000007565	si:dkey-85a20.4	71	50.140	Fundulus_heteroclitus
ENSCAPG00000010831	TARBP1	99	40.789	ENSGMOG00000004549	si:dkey-85a20.4	92	40.867	Gadus_morhua
ENSCAPG00000010831	TARBP1	99	58.091	ENSGALG00000011000	TARBP1	79	58.091	Gallus_gallus
ENSCAPG00000010831	TARBP1	99	41.777	ENSGAFG00000007387	si:dkey-85a20.4	78	41.860	Gambusia_affinis
ENSCAPG00000010831	TARBP1	99	42.417	ENSGACG00000005865	si:dkey-85a20.4	91	42.417	Gasterosteus_aculeatus
ENSCAPG00000010831	TARBP1	99	60.939	ENSGAGG00000012102	TARBP1	82	60.939	Gopherus_agassizii
ENSCAPG00000010831	TARBP1	99	71.097	ENSGGOG00000022879	TARBP1	93	71.017	Gorilla_gorilla
ENSCAPG00000010831	TARBP1	99	42.634	ENSHBUG00000008877	si:dkey-85a20.4	78	42.790	Haplochromis_burtoni
ENSCAPG00000010831	TARBP1	100	79.654	ENSHGLG00000011592	TARBP1	80	79.654	Heterocephalus_glaber_female
ENSCAPG00000010831	TARBP1	100	78.947	ENSHGLG00100015169	TARBP1	88	78.947	Heterocephalus_glaber_male
ENSCAPG00000010831	TARBP1	98	41.890	ENSIPUG00000005249	si:dkey-85a20.4	77	41.890	Ictalurus_punctatus
ENSCAPG00000010831	TARBP1	100	66.458	ENSSTOG00000032291	TARBP1	91	66.458	Ictidomys_tridecemlineatus
ENSCAPG00000010831	TARBP1	100	66.248	ENSJJAG00000017840	Tarbp1	88	66.013	Jaculus_jaculus
ENSCAPG00000010831	TARBP1	75	50.802	ENSKMAG00000017546	si:dkey-85a20.4	67	44.966	Kryptolebias_marmoratus
ENSCAPG00000010831	TARBP1	75	54.444	ENSLBEG00000012132	si:dkey-85a20.4	71	48.461	Labrus_bergylta
ENSCAPG00000010831	TARBP1	99	49.457	ENSLACG00000004337	TARBP1	78	49.380	Latimeria_chalumnae
ENSCAPG00000010831	TARBP1	99	46.124	ENSLOCG00000016214	si:dkey-85a20.4	78	46.124	Lepisosteus_oculatus
ENSCAPG00000010831	TARBP1	99	68.417	ENSLAFG00000011394	TARBP1	81	68.471	Loxodonta_africana
ENSCAPG00000010831	TARBP1	99	66.172	ENSMFAG00000041068	TARBP1	79	66.172	Macaca_fascicularis
ENSCAPG00000010831	TARBP1	99	66.172	ENSMMUG00000021703	TARBP1	78	66.172	Macaca_mulatta
ENSCAPG00000010831	TARBP1	99	68.906	ENSMNEG00000045002	TARBP1	79	68.906	Macaca_nemestrina
ENSCAPG00000010831	TARBP1	99	68.984	ENSMLEG00000044182	TARBP1	94	68.984	Mandrillus_leucophaeus
ENSCAPG00000010831	TARBP1	99	43.281	ENSMAMG00000021760	si:dkey-85a20.4	79	42.991	Mastacembelus_armatus
ENSCAPG00000010831	TARBP1	99	42.813	ENSMZEG00005005751	si:dkey-85a20.4	78	42.634	Maylandia_zebra
ENSCAPG00000010831	TARBP1	100	69.249	ENSMAUG00000020968	Tarbp1	81	69.092	Mesocricetus_auratus
ENSCAPG00000010831	TARBP1	99	63.936	ENSMICG00000015280	TARBP1	77	63.936	Microcebus_murinus
ENSCAPG00000010831	TARBP1	100	68.779	ENSMOCG00000004128	Tarbp1	81	68.779	Microtus_ochrogaster
ENSCAPG00000010831	TARBP1	99	41.888	ENSMMOG00000007795	si:dkey-85a20.4	78	42.200	Mola_mola
ENSCAPG00000010831	TARBP1	99	62.364	ENSMODG00000008504	TARBP1	77	62.053	Monodelphis_domestica
ENSCAPG00000010831	TARBP1	99	42.585	ENSMALG00000002916	si:dkey-85a20.4	78	42.971	Monopterus_albus
ENSCAPG00000010831	TARBP1	99	67.712	MGP_CAROLIEiJ_G0031729	Tarbp1	81	67.555	Mus_caroli
ENSCAPG00000010831	TARBP1	99	67.476	ENSMUSG00000090290	Tarbp1	81	67.241	Mus_musculus
ENSCAPG00000010831	TARBP1	99	67.762	MGP_PahariEiJ_G0023326	Tarbp1	81	67.396	Mus_pahari
ENSCAPG00000010831	TARBP1	100	67.449	MGP_SPRETEiJ_G0032846	Tarbp1	81	67.214	Mus_spretus
ENSCAPG00000010831	TARBP1	97	68.468	ENSMPUG00000002802	TARBP1	99	68.119	Mustela_putorius_furo
ENSCAPG00000010831	TARBP1	99	63.856	ENSMLUG00000002414	TARBP1	93	64.091	Myotis_lucifugus
ENSCAPG00000010831	TARBP1	99	69.688	ENSNLEG00000002518	TARBP1	79	69.688	Nomascus_leucogenys
ENSCAPG00000010831	TARBP1	78	72.817	ENSOPRG00000013822	TARBP1	62	72.727	Ochotona_princeps
ENSCAPG00000010831	TARBP1	100	78.292	ENSODEG00000005238	TARBP1	83	78.292	Octodon_degus
ENSCAPG00000010831	TARBP1	99	41.963	ENSONIG00000009789	si:dkey-85a20.4	91	42.195	Oreochromis_niloticus
ENSCAPG00000010831	TARBP1	99	69.882	ENSOCUG00000017418	TARBP1	78	70.039	Oryctolagus_cuniculus
ENSCAPG00000010831	TARBP1	99	40.700	ENSORLG00000010529	si:dkey-85a20.4	78	41.163	Oryzias_latipes
ENSCAPG00000010831	TARBP1	99	40.700	ENSORLG00020019264	si:dkey-85a20.4	78	41.058	Oryzias_latipes_hni
ENSCAPG00000010831	TARBP1	99	40.591	ENSORLG00015003276	si:dkey-85a20.4	78	40.948	Oryzias_latipes_hsok
ENSCAPG00000010831	TARBP1	99	66.536	ENSOGAG00000002379	TARBP1	79	66.379	Otolemur_garnettii
ENSCAPG00000010831	TARBP1	99	67.217	ENSOARG00000003434	TARBP1	84	67.270	Ovis_aries
ENSCAPG00000010831	TARBP1	99	69.357	ENSPPAG00000028097	TARBP1	94	69.357	Pan_paniscus
ENSCAPG00000010831	TARBP1	99	67.195	ENSPPRG00000013561	TARBP1	82	67.410	Panthera_pardus
ENSCAPG00000010831	TARBP1	99	68.122	ENSPTIG00000009281	TARBP1	95	68.339	Panthera_tigris_altaica
ENSCAPG00000010831	TARBP1	99	69.279	ENSPTRG00000002124	TARBP1	79	69.279	Pan_troglodytes
ENSCAPG00000010831	TARBP1	99	69.297	ENSPANG00000021933	TARBP1	79	69.297	Papio_anubis
ENSCAPG00000010831	TARBP1	99	45.637	ENSPKIG00000016716	si:dkey-85a20.4	78	45.637	Paramormyrops_kingsleyae
ENSCAPG00000010831	TARBP1	99	59.906	ENSPSIG00000010699	TARBP1	99	59.483	Pelodiscus_sinensis
ENSCAPG00000010831	TARBP1	99	69.678	ENSPEMG00000006888	Tarbp1	85	69.599	Peromyscus_maniculatus_bairdii
ENSCAPG00000010831	TARBP1	92	78.873	ENSPCIG00000029710	TARBP1	74	78.873	Phascolarctos_cinereus
ENSCAPG00000010831	TARBP1	99	41.441	ENSPFOG00000013020	si:dkey-85a20.4	91	41.660	Poecilia_formosa
ENSCAPG00000010831	TARBP1	99	41.860	ENSPLAG00000006044	si:dkey-85a20.4	78	41.770	Poecilia_latipinna
ENSCAPG00000010831	TARBP1	99	41.608	ENSPMEG00000017857	si:dkey-85a20.4	78	41.693	Poecilia_mexicana
ENSCAPG00000010831	TARBP1	99	42.028	ENSPREG00000022753	si:dkey-85a20.4	78	41.950	Poecilia_reticulata
ENSCAPG00000010831	TARBP1	87	95.652	ENSPPYG00000000102	TARBP1	77	95.652	Pongo_abelii
ENSCAPG00000010831	TARBP1	75	87.417	ENSPCAG00000004808	TARBP1	56	87.417	Procavia_capensis
ENSCAPG00000010831	TARBP1	99	65.388	ENSPCOG00000005666	TARBP1	78	65.153	Propithecus_coquereli
ENSCAPG00000010831	TARBP1	92	64.415	ENSPVAG00000014798	TARBP1	79	57.254	Pteropus_vampyrus
ENSCAPG00000010831	TARBP1	99	42.983	ENSPNYG00000019135	si:dkey-85a20.4	78	43.052	Pundamilia_nyererei
ENSCAPG00000010831	TARBP1	99	64.965	ENSRNOG00000053574	Tarbp1	81	64.808	Rattus_norvegicus
ENSCAPG00000010831	TARBP1	98	64.871	ENSRBIG00000043362	TARBP1	86	64.871	Rhinopithecus_bieti
ENSCAPG00000010831	TARBP1	99	68.672	ENSRROG00000029527	TARBP1	82	68.672	Rhinopithecus_roxellana
ENSCAPG00000010831	TARBP1	99	68.833	ENSSBOG00000034503	TARBP1	91	68.833	Saimiri_boliviensis_boliviensis
ENSCAPG00000010831	TARBP1	99	62.315	ENSSHAG00000000013	TARBP1	94	62.267	Sarcophilus_harrisii
ENSCAPG00000010831	TARBP1	99	43.310	ENSSFOG00015002660	si:dkey-85a20.4	94	43.455	Scleropages_formosus
ENSCAPG00000010831	TARBP1	99	43.310	ENSSMAG00000007081	si:dkey-85a20.4	77	43.233	Scophthalmus_maximus
ENSCAPG00000010831	TARBP1	99	42.080	ENSSDUG00000023566	si:dkey-85a20.4	78	42.408	Seriola_dumerili
ENSCAPG00000010831	TARBP1	99	43.512	ENSSLDG00000020200	si:dkey-85a20.4	78	43.823	Seriola_lalandi_dorsalis
ENSCAPG00000010831	TARBP1	93	69.124	ENSSARG00000012207	TARBP1	74	69.124	Sorex_araneus
ENSCAPG00000010831	TARBP1	99	58.513	ENSSPUG00000015364	TARBP1	79	58.353	Sphenodon_punctatus
ENSCAPG00000010831	TARBP1	99	42.473	ENSSPAG00000007213	si:dkey-85a20.4	79	42.473	Stegastes_partitus
ENSCAPG00000010831	TARBP1	94	91.579	ENSSSCG00000010160	TARBP1	77	91.579	Sus_scrofa
ENSCAPG00000010831	TARBP1	99	56.930	ENSTGUG00000010214	TARBP1	98	56.964	Taeniopygia_guttata
ENSCAPG00000010831	TARBP1	99	42.138	ENSTNIG00000016586	si:dkey-85a20.4	93	42.215	Tetraodon_nigroviridis
ENSCAPG00000010831	TARBP1	93	65.025	ENSTTRG00000008707	TARBP1	77	64.942	Tursiops_truncatus
ENSCAPG00000010831	TARBP1	99	69.321	ENSUMAG00000006730	TARBP1	95	69.195	Ursus_maritimus
ENSCAPG00000010831	TARBP1	73	82.000	ENSVPAG00000007665	TARBP1	64	82.000	Vicugna_pacos
ENSCAPG00000010831	TARBP1	99	69.937	ENSVVUG00000007460	TARBP1	90	69.702	Vulpes_vulpes
ENSCAPG00000010831	TARBP1	99	47.667	ENSXETG00000016224	tarbp1	94	47.667	Xenopus_tropicalis
ENSCAPG00000010831	TARBP1	92	46.322	ENSXCOG00000011779	si:dkey-85a20.4	88	46.458	Xiphophorus_couchianus
ENSCAPG00000010831	TARBP1	81	39.360	ENSXMAG00000009600	si:dkey-85a20.4	100	39.626	Xiphophorus_maculatus