EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAPG00000010888 (Gene tree)
Gene ID: -
Gene Symbol: ASCC3
Alias: ASC1p200|HELIC1|RNAH|dJ121G13.4|dJ467N11.1
Full Name: activating signal cointegrator 1 complex subunit 3
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Minus strand
Length: 291514 bases
Position: chrAVPZ01000600.1:733949-1025462
Accession: 18697
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000009478	ResIII	PF04851.15	4.6e-25	1	2
ENSCAPP00000009478	ResIII	PF04851.15	4.6e-25	2	2
ENSCAPP00000009488	ResIII	PF04851.15	1.5e-24	1	2
ENSCAPP00000009488	ResIII	PF04851.15	1.5e-24	2	2
ENSCAPP00000009482	ResIII	PF04851.15	1.9e-24	1	2
ENSCAPP00000009482	ResIII	PF04851.15	1.9e-24	2	2
ENSCAPP00000009488	DEAD	PF00270.29	1.8e-49	1	2
ENSCAPP00000009488	DEAD	PF00270.29	1.8e-49	2	2
ENSCAPP00000009482	DEAD	PF00270.29	2.3e-49	1	2
ENSCAPP00000009482	DEAD	PF00270.29	2.3e-49	2	2
ENSCAPP00000009478	DEAD	PF00270.29	3e-49	1	2
ENSCAPP00000009478	DEAD	PF00270.29	3e-49	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000013198	ASCC3-202	5538	-	ENSCAPP00000009482	1845 (aa)	-	-
ENSCAPT00000013204	ASCC3-203	5472	-	ENSCAPP00000009488	1824 (aa)	-	-
ENSCAPT00000013194	ASCC3-201	5958	-	ENSCAPP00000009478	1985 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000010888's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000010888's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAPG00000010888	ASCC3	80	47.054	ENSCAPG00000017234	SNRNP200	86	43.689

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000010888	ASCC3	99	88.644	ENSG00000112249	ASCC3	92	88.644	Homo_sapiens
ENSCAPG00000010888	ASCC3	99	89.120	ENSAMEG00000014749	ASCC3	92	89.120	Ailuropoda_melanoleuca
ENSCAPG00000010888	ASCC3	93	74.067	ENSACIG00000004551	ascc3	84	74.001	Amphilophus_citrinellus
ENSCAPG00000010888	ASCC3	97	77.225	ENSAOCG00000005106	ascc3	88	77.225	Amphiprion_ocellaris
ENSCAPG00000010888	ASCC3	93	77.383	ENSAPEG00000006181	ascc3	88	77.383	Amphiprion_percula
ENSCAPG00000010888	ASCC3	98	76.091	ENSATEG00000024950	ascc3	88	76.091	Anabas_testudineus
ENSCAPG00000010888	ASCC3	89	88.339	ENSAPLG00000012589	-	91	88.339	Anas_platyrhynchos
ENSCAPG00000010888	ASCC3	99	84.153	ENSACAG00000010080	ASCC3	89	84.153	Anolis_carolinensis
ENSCAPG00000010888	ASCC3	99	88.526	ENSANAG00000021476	ASCC3	92	88.526	Aotus_nancymaae
ENSCAPG00000010888	ASCC3	85	80.959	ENSACLG00000006736	ascc3	88	81.032	Astatotilapia_calliptera
ENSCAPG00000010888	ASCC3	98	68.914	ENSAMXG00000001395	ascc3	88	69.058	Astyanax_mexicanus
ENSCAPG00000010888	ASCC3	99	87.990	ENSBTAG00000020482	ASCC3	92	87.990	Bos_taurus
ENSCAPG00000010888	ASCC3	88	49.046	WBGene00013189	Y54E2A.4	86	49.046	Caenorhabditis_elegans
ENSCAPG00000010888	ASCC3	96	94.022	ENSCJAG00000001507	ASCC3	100	95.588	Callithrix_jacchus
ENSCAPG00000010888	ASCC3	99	89.001	ENSCAFG00000003554	ASCC3	92	89.001	Canis_familiaris
ENSCAPG00000010888	ASCC3	99	89.001	ENSCAFG00020016899	ASCC3	92	89.001	Canis_lupus_dingo
ENSCAPG00000010888	ASCC3	99	88.169	ENSCHIG00000023605	ASCC3	92	88.169	Capra_hircus
ENSCAPG00000010888	ASCC3	92	97.059	ENSTSYG00000006324	ASCC3	100	97.059	Carlito_syrichta
ENSCAPG00000010888	ASCC3	99	100.000	ENSCPOG00000013989	ASCC3	92	100.000	Cavia_porcellus
ENSCAPG00000010888	ASCC3	99	88.644	ENSCCAG00000024230	ASCC3	92	88.644	Cebus_capucinus
ENSCAPG00000010888	ASCC3	99	89.061	ENSCATG00000011281	ASCC3	92	89.061	Cercocebus_atys
ENSCAPG00000010888	ASCC3	99	93.333	ENSCLAG00000009794	ASCC3	91	93.333	Chinchilla_lanigera
ENSCAPG00000010888	ASCC3	99	88.823	ENSCSAG00000014674	ASCC3	92	88.823	Chlorocebus_sabaeus
ENSCAPG00000010888	ASCC3	92	91.205	ENSCHOG00000002063	ASCC3	75	91.205	Choloepus_hoffmanni
ENSCAPG00000010888	ASCC3	99	85.779	ENSCPBG00000003881	ASCC3	89	85.779	Chrysemys_picta_bellii
ENSCAPG00000010888	ASCC3	80	63.686	ENSCSAVG00000007670	-	99	67.089	Ciona_savignyi
ENSCAPG00000010888	ASCC3	99	88.704	ENSCANG00000004215	ASCC3	92	88.704	Colobus_angolensis_palliatus
ENSCAPG00000010888	ASCC3	99	88.347	ENSCGRG00001000918	Ascc3	92	88.347	Cricetulus_griseus_chok1gshd
ENSCAPG00000010888	ASCC3	99	88.347	ENSCGRG00000012933	Ascc3	92	88.347	Cricetulus_griseus_crigri
ENSCAPG00000010888	ASCC3	97	76.440	ENSCSEG00000012811	ascc3	88	76.374	Cynoglossus_semilaevis
ENSCAPG00000010888	ASCC3	98	74.935	ENSCVAG00000013014	ascc3	90	75.131	Cyprinodon_variegatus
ENSCAPG00000010888	ASCC3	97	76.832	ENSDARG00000086678	ascc3	100	84.175	Danio_rerio
ENSCAPG00000010888	ASCC3	78	94.737	ENSDNOG00000010279	ASCC3	99	93.947	Dasypus_novemcinctus
ENSCAPG00000010888	ASCC3	99	90.071	ENSDORG00000008572	Ascc3	92	90.071	Dipodomys_ordii
ENSCAPG00000010888	ASCC3	89	56.685	FBgn0038344	obe	80	56.889	Drosophila_melanogaster
ENSCAPG00000010888	ASCC3	79	96.893	ENSETEG00000010694	-	65	96.893	Echinops_telfairi
ENSCAPG00000010888	ASCC3	51	71.951	ENSEBUG00000009772	-	99	71.951	Eptatretus_burgeri
ENSCAPG00000010888	ASCC3	63	76.820	ENSEBUG00000007355	-	99	76.820	Eptatretus_burgeri
ENSCAPG00000010888	ASCC3	99	88.526	ENSEASG00005006324	ASCC3	92	88.526	Equus_asinus_asinus
ENSCAPG00000010888	ASCC3	99	88.644	ENSECAG00000012013	ASCC3	97	86.029	Equus_caballus
ENSCAPG00000010888	ASCC3	89	87.915	ENSEEUG00000009748	ASCC3	91	87.915	Erinaceus_europaeus
ENSCAPG00000010888	ASCC3	98	82.477	ENSELUG00000023441	ascc3	86	82.477	Esox_lucius
ENSCAPG00000010888	ASCC3	99	88.942	ENSFCAG00000031266	ASCC3	92	88.942	Felis_catus
ENSCAPG00000010888	ASCC3	99	85.714	ENSFALG00000005260	ASCC3	90	85.714	Ficedula_albicollis
ENSCAPG00000010888	ASCC3	99	100.000	ENSFDAG00000011358	ASCC3	91	100.000	Fukomys_damarensis
ENSCAPG00000010888	ASCC3	98	76.283	ENSFHEG00000019247	ascc3	87	83.757	Fundulus_heteroclitus
ENSCAPG00000010888	ASCC3	95	73.879	ENSGMOG00000018158	ascc3	86	74.009	Gadus_morhua
ENSCAPG00000010888	ASCC3	99	85.908	ENSGALG00000015465	ASCC3	90	85.908	Gallus_gallus
ENSCAPG00000010888	ASCC3	97	75.639	ENSGACG00000014141	ascc3	86	75.639	Gasterosteus_aculeatus
ENSCAPG00000010888	ASCC3	97	85.844	ENSGAGG00000020794	ASCC3	96	87.398	Gopherus_agassizii
ENSCAPG00000010888	ASCC3	99	88.644	ENSGGOG00000002790	ASCC3	92	88.644	Gorilla_gorilla
ENSCAPG00000010888	ASCC3	88	75.556	ENSHBUG00000015110	ascc3	93	75.627	Haplochromis_burtoni
ENSCAPG00000010888	ASCC3	99	96.667	ENSHGLG00000002093	ASCC3	91	96.667	Heterocephalus_glaber_female
ENSCAPG00000010888	ASCC3	99	96.667	ENSHGLG00100005896	ASCC3	91	96.667	Heterocephalus_glaber_male
ENSCAPG00000010888	ASCC3	98	76.343	ENSHCOG00000021142	ascc3	89	76.540	Hippocampus_comes
ENSCAPG00000010888	ASCC3	99	77.013	ENSIPUG00000013863	ascc3	90	77.143	Ictalurus_punctatus
ENSCAPG00000010888	ASCC3	99	89.231	ENSSTOG00000006645	ASCC3	92	89.055	Ictidomys_tridecemlineatus
ENSCAPG00000010888	ASCC3	99	88.205	ENSJJAG00000022570	Ascc3	92	88.557	Jaculus_jaculus
ENSCAPG00000010888	ASCC3	98	76.490	ENSKMAG00000003953	ascc3	85	76.555	Kryptolebias_marmoratus
ENSCAPG00000010888	ASCC3	84	80.648	ENSLBEG00000009623	ascc3	91	80.795	Labrus_bergylta
ENSCAPG00000010888	ASCC3	78	88.091	ENSLACG00000015253	ascc3	88	88.091	Latimeria_chalumnae
ENSCAPG00000010888	ASCC3	98	79.974	ENSLOCG00000016550	ascc3	88	79.974	Lepisosteus_oculatus
ENSCAPG00000010888	ASCC3	92	86.765	ENSLAFG00000011363	ASCC3	100	86.765	Loxodonta_africana
ENSCAPG00000010888	ASCC3	99	89.061	ENSMFAG00000002081	ASCC3	92	89.061	Macaca_fascicularis
ENSCAPG00000010888	ASCC3	99	89.061	ENSMMUG00000022287	ASCC3	92	89.061	Macaca_mulatta
ENSCAPG00000010888	ASCC3	99	89.001	ENSMNEG00000032760	ASCC3	92	89.001	Macaca_nemestrina
ENSCAPG00000010888	ASCC3	99	87.389	ENSMLEG00000035241	ASCC3	92	88.060	Mandrillus_leucophaeus
ENSCAPG00000010888	ASCC3	97	76.636	ENSMAMG00000005917	ascc3	88	76.636	Mastacembelus_armatus
ENSCAPG00000010888	ASCC3	85	80.959	ENSMZEG00005002710	ascc3	73	81.032	Maylandia_zebra
ENSCAPG00000010888	ASCC3	99	84.700	ENSMGAG00000013551	ASCC3	90	84.700	Meleagris_gallopavo
ENSCAPG00000010888	ASCC3	99	88.288	ENSMAUG00000018304	Ascc3	92	88.288	Mesocricetus_auratus
ENSCAPG00000010888	ASCC3	99	89.596	ENSMICG00000008861	ASCC3	92	89.596	Microcebus_murinus
ENSCAPG00000010888	ASCC3	99	88.644	ENSMOCG00000004549	Ascc3	92	88.644	Microtus_ochrogaster
ENSCAPG00000010888	ASCC3	94	71.783	ENSMMOG00000003198	ascc3	86	71.820	Mola_mola
ENSCAPG00000010888	ASCC3	99	84.707	ENSMODG00000018082	ASCC3	92	84.707	Monodelphis_domestica
ENSCAPG00000010888	ASCC3	93	72.906	ENSMALG00000015536	ascc3	85	72.906	Monopterus_albus
ENSCAPG00000010888	ASCC3	99	88.466	MGP_CAROLIEiJ_G0015302	Ascc3	92	88.466	Mus_caroli
ENSCAPG00000010888	ASCC3	99	88.288	ENSMUSG00000038774	Ascc3	92	88.466	Mus_musculus
ENSCAPG00000010888	ASCC3	99	88.407	MGP_SPRETEiJ_G0016111	Ascc3	92	88.407	Mus_spretus
ENSCAPG00000010888	ASCC3	99	89.180	ENSMPUG00000001675	ASCC3	92	89.180	Mustela_putorius_furo
ENSCAPG00000010888	ASCC3	99	87.990	ENSMLUG00000002886	ASCC3	92	87.990	Myotis_lucifugus
ENSCAPG00000010888	ASCC3	99	88.347	ENSNGAG00000000702	Ascc3	92	88.557	Nannospalax_galili
ENSCAPG00000010888	ASCC3	92	66.614	ENSNBRG00000022083	ascc3	93	66.614	Neolamprologus_brichardi
ENSCAPG00000010888	ASCC3	99	88.585	ENSNLEG00000013890	ASCC3	92	88.585	Nomascus_leucogenys
ENSCAPG00000010888	ASCC3	96	89.474	ENSMEUG00000003061	ASCC3	73	89.474	Notamacropus_eugenii
ENSCAPG00000010888	ASCC3	88	98.667	ENSOPRG00000010249	-	71	98.667	Ochotona_princeps
ENSCAPG00000010888	ASCC3	99	96.667	ENSODEG00000000069	ASCC3	91	96.667	Octodon_degus
ENSCAPG00000010888	ASCC3	99	76.521	ENSONIG00000016540	ascc3	89	76.586	Oreochromis_niloticus
ENSCAPG00000010888	ASCC3	98	81.743	ENSOANG00000008944	ASCC3	92	81.743	Ornithorhynchus_anatinus
ENSCAPG00000010888	ASCC3	99	90.769	ENSOCUG00000002766	ASCC3	92	91.371	Oryctolagus_cuniculus
ENSCAPG00000010888	ASCC3	94	75.541	ENSORLG00000004221	ascc3	89	75.475	Oryzias_latipes
ENSCAPG00000010888	ASCC3	86	80.741	ENSORLG00020022595	ascc3	88	80.741	Oryzias_latipes_hni
ENSCAPG00000010888	ASCC3	94	75.475	ENSORLG00015009231	ascc3	90	75.410	Oryzias_latipes_hsok
ENSCAPG00000010888	ASCC3	98	75.736	ENSOMEG00000019630	ascc3	87	75.736	Oryzias_melastigma
ENSCAPG00000010888	ASCC3	89	87.062	ENSOGAG00000009875	ASCC3	100	87.062	Otolemur_garnettii
ENSCAPG00000010888	ASCC3	99	88.169	ENSOARG00000011627	ASCC3	92	88.169	Ovis_aries
ENSCAPG00000010888	ASCC3	99	88.704	ENSPPAG00000030772	ASCC3	92	88.704	Pan_paniscus
ENSCAPG00000010888	ASCC3	99	88.763	ENSPPRG00000011358	ASCC3	92	88.763	Panthera_pardus
ENSCAPG00000010888	ASCC3	99	88.526	ENSPTIG00000006331	ASCC3	92	88.526	Panthera_tigris_altaica
ENSCAPG00000010888	ASCC3	99	88.704	ENSPTRG00000018448	ASCC3	92	88.704	Pan_troglodytes
ENSCAPG00000010888	ASCC3	99	88.942	ENSPANG00000006307	ASCC3	92	88.942	Papio_anubis
ENSCAPG00000010888	ASCC3	97	77.305	ENSPKIG00000013639	ascc3	88	77.305	Paramormyrops_kingsleyae
ENSCAPG00000010888	ASCC3	76	91.406	ENSPSIG00000002620	-	85	91.406	Pelodiscus_sinensis
ENSCAPG00000010888	ASCC3	99	88.783	ENSPEMG00000015319	Ascc3	92	88.783	Peromyscus_maniculatus_bairdii
ENSCAPG00000010888	ASCC3	76	76.828	ENSPMAG00000002163	-	100	76.828	Petromyzon_marinus
ENSCAPG00000010888	ASCC3	99	84.707	ENSPCIG00000017288	ASCC3	94	84.707	Phascolarctos_cinereus
ENSCAPG00000010888	ASCC3	97	76.119	ENSPFOG00000001462	ascc3	95	76.379	Poecilia_formosa
ENSCAPG00000010888	ASCC3	99	76.119	ENSPREG00000017616	ascc3	89	76.379	Poecilia_reticulata
ENSCAPG00000010888	ASCC3	99	88.942	ENSPPYG00000016869	ASCC3	92	88.942	Pongo_abelii
ENSCAPG00000010888	ASCC3	95	83.217	ENSPCAG00000008834	ASCC3	83	83.217	Procavia_capensis
ENSCAPG00000010888	ASCC3	97	93.333	ENSPVAG00000012827	ASCC3	90	93.333	Pteropus_vampyrus
ENSCAPG00000010888	ASCC3	85	80.959	ENSPNYG00000018913	ascc3	88	81.032	Pundamilia_nyererei
ENSCAPG00000010888	ASCC3	85	82.456	ENSPNAG00000016413	ascc3	86	82.675	Pygocentrus_nattereri
ENSCAPG00000010888	ASCC3	99	88.487	ENSRNOG00000037604	Ascc3	92	88.487	Rattus_norvegicus
ENSCAPG00000010888	ASCC3	99	88.763	ENSRROG00000045402	ASCC3	92	88.763	Rhinopithecus_roxellana
ENSCAPG00000010888	ASCC3	81	49.279	YGR271W	-	82	49.279	Saccharomyces_cerevisiae
ENSCAPG00000010888	ASCC3	99	88.823	ENSSBOG00000025142	ASCC3	92	88.823	Saimiri_boliviensis_boliviensis
ENSCAPG00000010888	ASCC3	99	84.401	ENSSHAG00000016496	ASCC3	92	84.401	Sarcophilus_harrisii
ENSCAPG00000010888	ASCC3	98	71.844	ENSSFOG00015010273	ascc3	92	72.216	Scleropages_formosus
ENSCAPG00000010888	ASCC3	97	76.178	ENSSMAG00000012927	ascc3	88	76.243	Scophthalmus_maximus
ENSCAPG00000010888	ASCC3	98	76.782	ENSSDUG00000010897	ascc3	88	76.782	Seriola_dumerili
ENSCAPG00000010888	ASCC3	97	76.963	ENSSLDG00000021782	ascc3	88	76.963	Seriola_lalandi_dorsalis
ENSCAPG00000010888	ASCC3	99	97.744	ENSSARG00000001858	ASCC3	84	97.744	Sorex_araneus
ENSCAPG00000010888	ASCC3	96	85.714	ENSSPUG00000001842	ASCC3	85	85.714	Sphenodon_punctatus
ENSCAPG00000010888	ASCC3	98	75.838	ENSSPAG00000007677	ascc3	89	75.838	Stegastes_partitus
ENSCAPG00000010888	ASCC3	100	90.000	ENSSSCG00000004358	ASCC3	91	94.272	Sus_scrofa
ENSCAPG00000010888	ASCC3	92	87.119	ENSTGUG00000012262	ASCC3	91	87.119	Taeniopygia_guttata
ENSCAPG00000010888	ASCC3	88	73.887	ENSTNIG00000005079	ascc3	80	73.822	Tetraodon_nigroviridis
ENSCAPG00000010888	ASCC3	86	97.015	ENSTBEG00000015236	ASCC3	71	97.015	Tupaia_belangeri
ENSCAPG00000010888	ASCC3	99	90.000	ENSTTRG00000008255	ASCC3	87	90.000	Tursiops_truncatus
ENSCAPG00000010888	ASCC3	70	97.231	ENSUAMG00000023340	-	98	97.133	Ursus_americanus
ENSCAPG00000010888	ASCC3	99	87.931	ENSUMAG00000021200	ASCC3	95	87.931	Ursus_maritimus
ENSCAPG00000010888	ASCC3	99	85.859	ENSVPAG00000001408	ASCC3	92	85.859	Vicugna_pacos
ENSCAPG00000010888	ASCC3	99	88.942	ENSVVUG00000015397	ASCC3	95	88.942	Vulpes_vulpes
ENSCAPG00000010888	ASCC3	78	90.375	ENSXETG00000032212	-	84	90.375	Xenopus_tropicalis
ENSCAPG00000010888	ASCC3	98	76.194	ENSXMAG00000000071	ascc3	88	76.455	Xiphophorus_maculatus