EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000010958 (Gene tree)
Gene ID: -
Gene Symbol: CSTF3
Alias: CstF-77
Full Name: cleavage stimulation factor subunit 3
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 62297 bases
Position: chrAVPZ01000922.1:5616167-5678463
Accession: 2485
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000009510	Suf	PF05843.14	4.9e-56	1	2
ENSCAPP00000009510	Suf	PF05843.14	4.9e-56	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000013226	CSTF3-201	1752	-	ENSCAPP00000009510	583 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000010958's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000010958's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000010958	CSTF3	98	96.591	ENSG00000176102	CSTF3	99	98.889	Homo_sapiens
ENSCAPG00000010958	CSTF3	98	88.626	ENSAPOG00000014054	cstf3	83	88.626	Acanthochromis_polyacanthus
ENSCAPG00000010958	CSTF3	98	96.023	ENSAMEG00000007187	CSTF3	83	96.023	Ailuropoda_melanoleuca
ENSCAPG00000010958	CSTF3	93	69.752	ENSACIG00000005539	cstf3	100	69.752	Amphilophus_citrinellus
ENSCAPG00000010958	CSTF3	98	88.626	ENSAOCG00000010930	cstf3	83	88.626	Amphiprion_ocellaris
ENSCAPG00000010958	CSTF3	98	88.626	ENSAPEG00000007903	cstf3	83	88.626	Amphiprion_percula
ENSCAPG00000010958	CSTF3	98	88.863	ENSATEG00000000190	cstf3	83	88.863	Anabas_testudineus
ENSCAPG00000010958	CSTF3	98	91.706	ENSAPLG00000007217	CSTF3	84	91.706	Anas_platyrhynchos
ENSCAPG00000010958	CSTF3	98	90.995	ENSACAG00000002823	CSTF3	83	90.995	Anolis_carolinensis
ENSCAPG00000010958	CSTF3	98	96.591	ENSANAG00000020699	CSTF3	90	96.591	Aotus_nancymaae
ENSCAPG00000010958	CSTF3	98	90.602	ENSACLG00000007820	cstf3	83	90.602	Astatotilapia_calliptera
ENSCAPG00000010958	CSTF3	98	89.151	ENSAMXG00000014198	cstf3	83	89.387	Astyanax_mexicanus
ENSCAPG00000010958	CSTF3	98	96.591	ENSBTAG00000008617	CSTF3	89	96.591	Bos_taurus
ENSCAPG00000010958	CSTF3	97	50.753	WBGene00006307	suf-1	84	50.753	Caenorhabditis_elegans
ENSCAPG00000010958	CSTF3	98	96.591	ENSCJAG00000005533	CSTF3	90	96.591	Callithrix_jacchus
ENSCAPG00000010958	CSTF3	98	96.591	ENSCAFG00000007264	CSTF3	83	96.591	Canis_familiaris
ENSCAPG00000010958	CSTF3	98	96.591	ENSCAFG00020002715	CSTF3	83	96.591	Canis_lupus_dingo
ENSCAPG00000010958	CSTF3	98	96.591	ENSCHIG00000016418	CSTF3	90	96.591	Capra_hircus
ENSCAPG00000010958	CSTF3	98	94.886	ENSTSYG00000000451	CSTF3	90	94.886	Carlito_syrichta
ENSCAPG00000010958	CSTF3	98	96.591	ENSCPOG00000005545	CSTF3	84	96.591	Cavia_porcellus
ENSCAPG00000010958	CSTF3	98	96.591	ENSCCAG00000024790	CSTF3	90	96.591	Cebus_capucinus
ENSCAPG00000010958	CSTF3	98	96.591	ENSCATG00000007080	CSTF3	90	96.591	Cercocebus_atys
ENSCAPG00000010958	CSTF3	98	96.591	ENSCLAG00000016179	CSTF3	83	96.591	Chinchilla_lanigera
ENSCAPG00000010958	CSTF3	73	96.023	ENSCHOG00000002497	CSTF3	63	96.023	Choloepus_hoffmanni
ENSCAPG00000010958	CSTF3	98	91.706	ENSCPBG00000006753	CSTF3	83	91.706	Chrysemys_picta_bellii
ENSCAPG00000010958	CSTF3	95	68.720	ENSCING00000006401	-	79	68.720	Ciona_intestinalis
ENSCAPG00000010958	CSTF3	95	67.849	ENSCSAVG00000004851	-	80	67.849	Ciona_savignyi
ENSCAPG00000010958	CSTF3	98	96.591	ENSCANG00000035468	CSTF3	90	96.591	Colobus_angolensis_palliatus
ENSCAPG00000010958	CSTF3	98	96.023	ENSCGRG00001014773	Cstf3	83	96.023	Cricetulus_griseus_chok1gshd
ENSCAPG00000010958	CSTF3	98	96.023	ENSCGRG00000004142	Cstf3	83	96.023	Cricetulus_griseus_crigri
ENSCAPG00000010958	CSTF3	98	88.863	ENSCSEG00000014283	cstf3	83	88.863	Cynoglossus_semilaevis
ENSCAPG00000010958	CSTF3	98	87.678	ENSCVAG00000019739	cstf3	83	87.678	Cyprinodon_variegatus
ENSCAPG00000010958	CSTF3	98	89.125	ENSDARG00000018904	cstf3	83	89.125	Danio_rerio
ENSCAPG00000010958	CSTF3	98	95.455	ENSDNOG00000007366	CSTF3	83	95.455	Dasypus_novemcinctus
ENSCAPG00000010958	CSTF3	98	96.023	ENSDORG00000005898	Cstf3	83	96.023	Dipodomys_ordii
ENSCAPG00000010958	CSTF3	93	62.945	FBgn0003559	su(f)	78	62.945	Drosophila_melanogaster
ENSCAPG00000010958	CSTF3	89	96.023	ENSETEG00000017097	CSTF3	74	96.023	Echinops_telfairi
ENSCAPG00000010958	CSTF3	83	63.869	ENSEBUG00000015459	cstf3	91	63.869	Eptatretus_burgeri
ENSCAPG00000010958	CSTF3	98	96.591	ENSEASG00005019884	CSTF3	85	96.591	Equus_asinus_asinus
ENSCAPG00000010958	CSTF3	98	96.591	ENSECAG00000023338	CSTF3	85	96.591	Equus_caballus
ENSCAPG00000010958	CSTF3	98	95.455	ENSEEUG00000015167	CSTF3	83	95.455	Erinaceus_europaeus
ENSCAPG00000010958	CSTF3	98	87.441	ENSELUG00000023393	cstf3	83	87.441	Esox_lucius
ENSCAPG00000010958	CSTF3	98	96.023	ENSFCAG00000030711	CSTF3	83	96.023	Felis_catus
ENSCAPG00000010958	CSTF3	96	90.024	ENSFALG00000010764	CSTF3	90	90.024	Ficedula_albicollis
ENSCAPG00000010958	CSTF3	98	96.023	ENSFDAG00000012082	CSTF3	83	96.023	Fukomys_damarensis
ENSCAPG00000010958	CSTF3	98	87.915	ENSFHEG00000020623	cstf3	83	87.915	Fundulus_heteroclitus
ENSCAPG00000010958	CSTF3	98	87.470	ENSGMOG00000012275	cstf3	83	87.470	Gadus_morhua
ENSCAPG00000010958	CSTF3	98	91.943	ENSGALG00000011685	CSTF3	83	91.943	Gallus_gallus
ENSCAPG00000010958	CSTF3	98	88.389	ENSGAFG00000002181	cstf3	83	88.389	Gambusia_affinis
ENSCAPG00000010958	CSTF3	98	88.152	ENSGACG00000015997	cstf3	83	88.152	Gasterosteus_aculeatus
ENSCAPG00000010958	CSTF3	98	91.706	ENSGAGG00000006200	CSTF3	83	91.706	Gopherus_agassizii
ENSCAPG00000010958	CSTF3	97	96.591	ENSGGOG00000026591	CSTF3	85	92.875	Gorilla_gorilla
ENSCAPG00000010958	CSTF3	98	90.602	ENSHBUG00000016656	cstf3	83	90.602	Haplochromis_burtoni
ENSCAPG00000010958	CSTF3	98	96.023	ENSHGLG00000017834	CSTF3	83	96.023	Heterocephalus_glaber_female
ENSCAPG00000010958	CSTF3	98	96.023	ENSHGLG00100018042	CSTF3	84	96.023	Heterocephalus_glaber_male
ENSCAPG00000010958	CSTF3	98	88.995	ENSHCOG00000015218	cstf3	83	88.995	Hippocampus_comes
ENSCAPG00000010958	CSTF3	98	88.915	ENSIPUG00000013170	CSTF3	84	88.915	Ictalurus_punctatus
ENSCAPG00000010958	CSTF3	98	96.591	ENSSTOG00000013306	CSTF3	83	96.591	Ictidomys_tridecemlineatus
ENSCAPG00000010958	CSTF3	98	92.821	ENSJJAG00000018430	Cstf3	91	92.821	Jaculus_jaculus
ENSCAPG00000010958	CSTF3	98	87.943	ENSKMAG00000010916	cstf3	83	87.943	Kryptolebias_marmoratus
ENSCAPG00000010958	CSTF3	98	88.389	ENSLBEG00000002306	cstf3	83	88.389	Labrus_bergylta
ENSCAPG00000010958	CSTF3	98	90.307	ENSLACG00000017296	CSTF3	83	90.307	Latimeria_chalumnae
ENSCAPG00000010958	CSTF3	98	89.125	ENSLOCG00000004415	cstf3	83	89.125	Lepisosteus_oculatus
ENSCAPG00000010958	CSTF3	98	95.455	ENSLAFG00000008712	CSTF3	83	95.455	Loxodonta_africana
ENSCAPG00000010958	CSTF3	98	96.591	ENSMFAG00000029516	CSTF3	90	96.591	Macaca_fascicularis
ENSCAPG00000010958	CSTF3	98	96.591	ENSMMUG00000002542	CSTF3	84	96.591	Macaca_mulatta
ENSCAPG00000010958	CSTF3	98	96.591	ENSMNEG00000021807	CSTF3	90	96.591	Macaca_nemestrina
ENSCAPG00000010958	CSTF3	98	96.591	ENSMLEG00000039594	CSTF3	90	96.591	Mandrillus_leucophaeus
ENSCAPG00000010958	CSTF3	98	90.998	ENSMAMG00000020423	cstf3	83	90.998	Mastacembelus_armatus
ENSCAPG00000010958	CSTF3	98	90.602	ENSMZEG00005012082	cstf3	84	90.602	Maylandia_zebra
ENSCAPG00000010958	CSTF3	98	91.943	ENSMGAG00000001383	CSTF3	84	91.943	Meleagris_gallopavo
ENSCAPG00000010958	CSTF3	98	96.023	ENSMAUG00000002487	Cstf3	83	96.023	Mesocricetus_auratus
ENSCAPG00000010958	CSTF3	98	96.023	ENSMICG00000004784	CSTF3	90	96.023	Microcebus_murinus
ENSCAPG00000010958	CSTF3	98	96.023	ENSMOCG00000017583	Cstf3	83	96.023	Microtus_ochrogaster
ENSCAPG00000010958	CSTF3	98	88.626	ENSMMOG00000016026	cstf3	80	88.626	Mola_mola
ENSCAPG00000010958	CSTF3	98	92.045	ENSMODG00000009745	-	83	92.045	Monodelphis_domestica
ENSCAPG00000010958	CSTF3	98	84.323	ENSMODG00000025205	-	83	84.323	Monodelphis_domestica
ENSCAPG00000010958	CSTF3	98	89.048	ENSMALG00000012050	cstf3	83	89.048	Monopterus_albus
ENSCAPG00000010958	CSTF3	98	96.023	MGP_CAROLIEiJ_G0024026	Cstf3	83	96.023	Mus_caroli
ENSCAPG00000010958	CSTF3	98	96.023	ENSMUSG00000027176	Cstf3	83	96.023	Mus_musculus
ENSCAPG00000010958	CSTF3	98	96.023	MGP_PahariEiJ_G0025464	Cstf3	83	96.023	Mus_pahari
ENSCAPG00000010958	CSTF3	98	96.023	MGP_SPRETEiJ_G0024939	Cstf3	83	96.023	Mus_spretus
ENSCAPG00000010958	CSTF3	98	96.023	ENSMPUG00000011457	CSTF3	83	96.023	Mustela_putorius_furo
ENSCAPG00000010958	CSTF3	98	90.284	ENSMLUG00000026022	-	83	90.284	Myotis_lucifugus
ENSCAPG00000010958	CSTF3	98	95.455	ENSMLUG00000003073	-	83	95.455	Myotis_lucifugus
ENSCAPG00000010958	CSTF3	98	96.591	ENSNGAG00000010677	Cstf3	84	96.591	Nannospalax_galili
ENSCAPG00000010958	CSTF3	93	91.169	ENSNBRG00000007345	cstf3	90	91.169	Neolamprologus_brichardi
ENSCAPG00000010958	CSTF3	98	96.591	ENSNLEG00000017901	CSTF3	90	96.591	Nomascus_leucogenys
ENSCAPG00000010958	CSTF3	73	94.920	ENSMEUG00000005640	-	82	94.920	Notamacropus_eugenii
ENSCAPG00000010958	CSTF3	68	93.277	ENSOPRG00000000199	-	56	93.277	Ochotona_princeps
ENSCAPG00000010958	CSTF3	92	74.520	ENSODEG00000006311	-	95	74.520	Octodon_degus
ENSCAPG00000010958	CSTF3	98	96.023	ENSODEG00000016737	-	83	96.023	Octodon_degus
ENSCAPG00000010958	CSTF3	98	89.100	ENSONIG00000005563	cstf3	83	89.100	Oreochromis_niloticus
ENSCAPG00000010958	CSTF3	95	93.147	ENSOANG00000015140	CSTF3	88	93.147	Ornithorhynchus_anatinus
ENSCAPG00000010958	CSTF3	98	95.455	ENSOCUG00000015417	CSTF3	83	95.455	Oryctolagus_cuniculus
ENSCAPG00000010958	CSTF3	98	87.707	ENSORLG00000009762	cstf3	84	87.707	Oryzias_latipes
ENSCAPG00000010958	CSTF3	98	88.124	ENSORLG00020005540	cstf3	84	88.124	Oryzias_latipes_hni
ENSCAPG00000010958	CSTF3	98	90.049	ENSORLG00015003551	cstf3	83	90.049	Oryzias_latipes_hsok
ENSCAPG00000010958	CSTF3	98	87.707	ENSOMEG00000003848	cstf3	83	89.822	Oryzias_melastigma
ENSCAPG00000010958	CSTF3	98	96.023	ENSOGAG00000010229	CSTF3	83	96.023	Otolemur_garnettii
ENSCAPG00000010958	CSTF3	95	96.591	ENSOARG00000017271	CSTF3	87	96.591	Ovis_aries
ENSCAPG00000010958	CSTF3	98	94.318	ENSPPAG00000027358	CSTF3	83	94.318	Pan_paniscus
ENSCAPG00000010958	CSTF3	98	96.023	ENSPPRG00000016852	CSTF3	83	96.023	Panthera_pardus
ENSCAPG00000010958	CSTF3	98	96.023	ENSPTIG00000008716	CSTF3	83	96.023	Panthera_tigris_altaica
ENSCAPG00000010958	CSTF3	98	96.591	ENSPTRG00000003485	CSTF3	83	96.591	Pan_troglodytes
ENSCAPG00000010958	CSTF3	98	96.591	ENSPANG00000013722	CSTF3	84	96.591	Papio_anubis
ENSCAPG00000010958	CSTF3	98	88.180	ENSPKIG00000023648	cstf3	83	88.180	Paramormyrops_kingsleyae
ENSCAPG00000010958	CSTF3	98	91.469	ENSPSIG00000009173	CSTF3	83	91.469	Pelodiscus_sinensis
ENSCAPG00000010958	CSTF3	70	88.152	ENSPMGG00000000164	cstf3	77	88.152	Periophthalmus_magnuspinnatus
ENSCAPG00000010958	CSTF3	98	95.455	ENSPEMG00000011481	Cstf3	83	95.455	Peromyscus_maniculatus_bairdii
ENSCAPG00000010958	CSTF3	98	82.783	ENSPMAG00000007282	cstf3	83	82.783	Petromyzon_marinus
ENSCAPG00000010958	CSTF3	98	80.332	ENSPCIG00000030419	-	75	80.332	Phascolarctos_cinereus
ENSCAPG00000010958	CSTF3	98	92.214	ENSPCIG00000026406	-	90	94.026	Phascolarctos_cinereus
ENSCAPG00000010958	CSTF3	98	88.389	ENSPFOG00000017239	cstf3	83	88.389	Poecilia_formosa
ENSCAPG00000010958	CSTF3	98	88.389	ENSPLAG00000009456	cstf3	83	88.389	Poecilia_latipinna
ENSCAPG00000010958	CSTF3	98	88.389	ENSPMEG00000010320	cstf3	83	88.389	Poecilia_mexicana
ENSCAPG00000010958	CSTF3	98	90.754	ENSPREG00000013549	cstf3	83	90.754	Poecilia_reticulata
ENSCAPG00000010958	CSTF3	98	96.591	ENSPPYG00000003375	CSTF3	83	96.591	Pongo_abelii
ENSCAPG00000010958	CSTF3	70	100.000	ENSPCAG00000008025	-	58	100.000	Procavia_capensis
ENSCAPG00000010958	CSTF3	98	96.023	ENSPCOG00000014417	CSTF3	82	96.023	Propithecus_coquereli
ENSCAPG00000010958	CSTF3	98	96.591	ENSPVAG00000002350	CSTF3	83	96.591	Pteropus_vampyrus
ENSCAPG00000010958	CSTF3	98	90.602	ENSPNYG00000018259	cstf3	84	90.602	Pundamilia_nyererei
ENSCAPG00000010958	CSTF3	98	89.598	ENSPNAG00000020182	cstf3	83	89.598	Pygocentrus_nattereri
ENSCAPG00000010958	CSTF3	93	96.023	ENSRNOG00000012089	Cstf3	90	96.023	Rattus_norvegicus
ENSCAPG00000010958	CSTF3	98	96.591	ENSRBIG00000044258	CSTF3	90	96.591	Rhinopithecus_bieti
ENSCAPG00000010958	CSTF3	98	96.591	ENSRROG00000043450	CSTF3	90	96.591	Rhinopithecus_roxellana
ENSCAPG00000010958	CSTF3	98	96.591	ENSSBOG00000024764	CSTF3	90	96.591	Saimiri_boliviensis_boliviensis
ENSCAPG00000010958	CSTF3	98	91.943	ENSSHAG00000018128	-	83	91.943	Sarcophilus_harrisii
ENSCAPG00000010958	CSTF3	98	84.597	ENSSHAG00000003135	-	83	84.597	Sarcophilus_harrisii
ENSCAPG00000010958	CSTF3	98	88.652	ENSSFOG00015022133	cstf3	83	88.652	Scleropages_formosus
ENSCAPG00000010958	CSTF3	98	88.152	ENSSMAG00000002197	cstf3	83	88.152	Scophthalmus_maximus
ENSCAPG00000010958	CSTF3	98	88.626	ENSSDUG00000020426	cstf3	83	88.626	Seriola_dumerili
ENSCAPG00000010958	CSTF3	98	89.260	ENSSLDG00000025649	cstf3	86	89.260	Seriola_lalandi_dorsalis
ENSCAPG00000010958	CSTF3	98	96.023	ENSSARG00000000391	CSTF3	83	96.023	Sorex_araneus
ENSCAPG00000010958	CSTF3	98	91.469	ENSSPUG00000010546	CSTF3	86	91.469	Sphenodon_punctatus
ENSCAPG00000010958	CSTF3	98	88.626	ENSSPAG00000004958	cstf3	83	88.626	Stegastes_partitus
ENSCAPG00000010958	CSTF3	98	96.023	ENSSSCG00000040954	CSTF3	83	96.023	Sus_scrofa
ENSCAPG00000010958	CSTF3	98	91.469	ENSTGUG00000005010	CSTF3	84	91.469	Taeniopygia_guttata
ENSCAPG00000010958	CSTF3	98	87.678	ENSTRUG00000004959	cstf3	86	87.678	Takifugu_rubripes
ENSCAPG00000010958	CSTF3	98	87.915	ENSTNIG00000013811	cstf3	83	87.915	Tetraodon_nigroviridis
ENSCAPG00000010958	CSTF3	95	93.622	ENSTBEG00000001544	CSTF3	80	93.622	Tupaia_belangeri
ENSCAPG00000010958	CSTF3	98	95.455	ENSTTRG00000016366	CSTF3	83	95.455	Tursiops_truncatus
ENSCAPG00000010958	CSTF3	99	96.023	ENSUMAG00000018971	CSTF3	90	96.023	Ursus_maritimus
ENSCAPG00000010958	CSTF3	98	96.591	ENSVPAG00000007800	CSTF3	83	96.591	Vicugna_pacos
ENSCAPG00000010958	CSTF3	98	96.591	ENSVVUG00000014938	CSTF3	90	96.591	Vulpes_vulpes
ENSCAPG00000010958	CSTF3	70	35.499	ENSXETG00000017946	-	88	35.499	Xenopus_tropicalis
ENSCAPG00000010958	CSTF3	92	79.245	ENSXETG00000021399	cstf3	89	79.245	Xenopus_tropicalis
ENSCAPG00000010958	CSTF3	93	90.649	ENSXCOG00000011741	cstf3	90	90.649	Xiphophorus_couchianus
ENSCAPG00000010958	CSTF3	98	88.389	ENSXMAG00000009545	cstf3	83	88.389	Xiphophorus_maculatus