EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAPG00000011052 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 8925 bases
Position: chrAVPZ01000223.1:57642705-57651629
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000009619	KH_1	PF00013.29	9.4e-53	1	3
ENSCAPP00000009619	KH_1	PF00013.29	9.4e-53	2	3
ENSCAPP00000009619	KH_1	PF00013.29	9.4e-53	3	3
ENSCAPP00000009619	KH_2	PF07650.17	5.8e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000013335	-	1227	-	ENSCAPP00000009619	409 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000011052's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000011052's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAPG00000011052	-	61	34.524	ENSCAPG00000005895	PCBP4	74	34.524
ENSCAPG00000011052	-	66	70.330	ENSCAPG00000007144	FUBP3	68	70.330
ENSCAPG00000011052	-	66	70.073	ENSCAPG00000005534	KHSRP	61	70.073

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000011052	-	67	98.168	ENSG00000162613	FUBP1	58	98.529	Homo_sapiens
ENSCAPG00000011052	-	65	81.818	ENSAPOG00000014845	fubp1	55	82.213	Acanthochromis_polyacanthus
ENSCAPG00000011052	-	67	98.535	ENSAMEG00000007372	FUBP1	59	98.535	Ailuropoda_melanoleuca
ENSCAPG00000011052	-	65	80.000	ENSACIG00000020024	fubp1	56	80.000	Amphilophus_citrinellus
ENSCAPG00000011052	-	65	82.540	ENSAPEG00000012232	fubp1	57	82.937	Amphiprion_percula
ENSCAPG00000011052	-	65	84.274	ENSATEG00000018619	fubp1	56	83.600	Anabas_testudineus
ENSCAPG00000011052	-	67	98.168	ENSAPLG00000005965	FUBP1	61	98.168	Anas_platyrhynchos
ENSCAPG00000011052	-	67	95.620	ENSACAG00000006310	FUBP1	52	95.620	Anolis_carolinensis
ENSCAPG00000011052	-	65	84.677	ENSACLG00000006708	fubp1	57	84.677	Astatotilapia_calliptera
ENSCAPG00000011052	-	64	85.356	ENSAMXG00000005525	fubp1	63	85.356	Astyanax_mexicanus
ENSCAPG00000011052	-	67	98.535	ENSCJAG00000007062	FUBP1	58	98.168	Callithrix_jacchus
ENSCAPG00000011052	-	67	98.535	ENSCAFG00000020361	FUBP1	59	98.535	Canis_familiaris
ENSCAPG00000011052	-	67	98.168	ENSTSYG00000000148	FUBP1	62	98.168	Carlito_syrichta
ENSCAPG00000011052	-	67	98.901	ENSCPOG00000002757	FUBP1	57	98.901	Cavia_porcellus
ENSCAPG00000011052	-	67	98.168	ENSCATG00000042126	FUBP1	58	98.168	Cercocebus_atys
ENSCAPG00000011052	-	67	98.901	ENSCLAG00000005621	FUBP1	58	98.901	Chinchilla_lanigera
ENSCAPG00000011052	-	67	98.168	ENSCSAG00000001402	FUBP1	58	98.168	Chlorocebus_sabaeus
ENSCAPG00000011052	-	67	98.535	ENSCHOG00000008177	FUBP1	57	98.535	Choloepus_hoffmanni
ENSCAPG00000011052	-	67	98.535	ENSCGRG00001007103	Fubp1	59	98.535	Cricetulus_griseus_chok1gshd
ENSCAPG00000011052	-	67	98.535	ENSCGRG00000003372	Fubp1	61	98.535	Cricetulus_griseus_crigri
ENSCAPG00000011052	-	65	81.452	ENSCSEG00000021412	fubp1	54	81.452	Cynoglossus_semilaevis
ENSCAPG00000011052	-	65	84.677	ENSCVAG00000014487	fubp1	59	84.677	Cyprinodon_variegatus
ENSCAPG00000011052	-	64	80.469	ENSDARG00000029248	fubp1	56	80.469	Danio_rerio
ENSCAPG00000011052	-	58	62.562	ENSDNOG00000034565	-	51	62.562	Dasypus_novemcinctus
ENSCAPG00000011052	-	67	98.168	ENSDORG00000016534	Fubp1	57	98.168	Dipodomys_ordii
ENSCAPG00000011052	-	62	64.567	ENSEBUG00000016143	fubp1	55	64.567	Eptatretus_burgeri
ENSCAPG00000011052	-	67	75.824	ENSEEUG00000001287	FUBP1	57	75.824	Erinaceus_europaeus
ENSCAPG00000011052	-	67	75.357	ENSELUG00000007990	fubp1	59	75.000	Esox_lucius
ENSCAPG00000011052	-	67	98.168	ENSFALG00000005768	FUBP1	56	98.168	Ficedula_albicollis
ENSCAPG00000011052	-	67	98.901	ENSFDAG00000014210	FUBP1	57	98.901	Fukomys_damarensis
ENSCAPG00000011052	-	65	84.677	ENSFHEG00000005230	fubp1	65	81.893	Fundulus_heteroclitus
ENSCAPG00000011052	-	63	74.708	ENSGMOG00000003370	fubp1	52	74.708	Gadus_morhua
ENSCAPG00000011052	-	67	98.168	ENSGALG00000008939	FUBP1	68	98.168	Gallus_gallus
ENSCAPG00000011052	-	65	84.677	ENSGAFG00000020972	fubp1	64	76.573	Gambusia_affinis
ENSCAPG00000011052	-	67	76.557	ENSGACG00000016563	fubp1	54	82.329	Gasterosteus_aculeatus
ENSCAPG00000011052	-	65	84.677	ENSHBUG00000009835	fubp1	67	84.677	Haplochromis_burtoni
ENSCAPG00000011052	-	67	93.040	ENSHGLG00000002808	-	59	93.040	Heterocephalus_glaber_female
ENSCAPG00000011052	-	67	98.901	ENSHGLG00000008415	-	58	98.901	Heterocephalus_glaber_female
ENSCAPG00000011052	-	67	93.040	ENSHGLG00100001414	-	59	93.040	Heterocephalus_glaber_male
ENSCAPG00000011052	-	67	98.901	ENSHGLG00100003417	-	58	98.901	Heterocephalus_glaber_male
ENSCAPG00000011052	-	64	81.928	ENSHCOG00000000910	fubp1	54	81.928	Hippocampus_comes
ENSCAPG00000011052	-	63	83.600	ENSIPUG00000009896	fubp1	55	83.600	Ictalurus_punctatus
ENSCAPG00000011052	-	67	98.535	ENSSTOG00000014312	FUBP1	58	98.535	Ictidomys_tridecemlineatus
ENSCAPG00000011052	-	67	98.168	ENSJJAG00000020069	Fubp1	57	98.168	Jaculus_jaculus
ENSCAPG00000011052	-	65	84.739	ENSKMAG00000018897	fubp1	55	84.739	Kryptolebias_marmoratus
ENSCAPG00000011052	-	67	75.357	ENSLBEG00000012700	fubp1	56	80.769	Labrus_bergylta
ENSCAPG00000011052	-	64	84.585	ENSLOCG00000003745	fubp1	51	84.585	Lepisosteus_oculatus
ENSCAPG00000011052	-	67	98.535	ENSLAFG00000003273	FUBP1	63	97.638	Loxodonta_africana
ENSCAPG00000011052	-	67	98.168	ENSMFAG00000031825	FUBP1	58	97.802	Macaca_fascicularis
ENSCAPG00000011052	-	67	98.168	ENSMMUG00000002899	FUBP1	59	98.168	Macaca_mulatta
ENSCAPG00000011052	-	67	98.168	ENSMNEG00000045212	FUBP1	58	98.168	Macaca_nemestrina
ENSCAPG00000011052	-	65	84.677	ENSMAMG00000007489	fubp1	52	84.677	Mastacembelus_armatus
ENSCAPG00000011052	-	65	84.677	ENSMZEG00005024298	fubp1	55	84.677	Maylandia_zebra
ENSCAPG00000011052	-	67	97.436	ENSMGAG00000009424	FUBP1	61	97.436	Meleagris_gallopavo
ENSCAPG00000011052	-	67	98.535	ENSMAUG00000016428	Fubp1	57	98.851	Mesocricetus_auratus
ENSCAPG00000011052	-	67	98.535	ENSMOCG00000014751	Fubp1	57	98.535	Microtus_ochrogaster
ENSCAPG00000011052	-	65	82.800	ENSMMOG00000019463	fubp1	63	82.800	Mola_mola
ENSCAPG00000011052	-	67	87.179	ENSMODG00000020804	FUBP1	60	87.179	Monodelphis_domestica
ENSCAPG00000011052	-	65	81.452	ENSMALG00000015173	fubp1	55	81.452	Monopterus_albus
ENSCAPG00000011052	-	67	98.168	MGP_CAROLIEiJ_G0025740	Fubp1	71	97.802	Mus_caroli
ENSCAPG00000011052	-	67	98.168	ENSMUSG00000028034	Fubp1	71	97.802	Mus_musculus
ENSCAPG00000011052	-	67	98.168	MGP_PahariEiJ_G0027191	Fubp1	71	97.802	Mus_pahari
ENSCAPG00000011052	-	67	98.168	MGP_SPRETEiJ_G0026693	Fubp1	71	97.802	Mus_spretus
ENSCAPG00000011052	-	67	98.535	ENSMLUG00000014802	FUBP1	59	98.535	Myotis_lucifugus
ENSCAPG00000011052	-	67	98.535	ENSNGAG00000014302	Fubp1	60	98.535	Nannospalax_galili
ENSCAPG00000011052	-	65	84.677	ENSNBRG00000015099	fubp1	57	84.677	Neolamprologus_brichardi
ENSCAPG00000011052	-	67	89.091	ENSNLEG00000009772	FUBP1	57	89.091	Nomascus_leucogenys
ENSCAPG00000011052	-	67	98.901	ENSODEG00000002600	-	57	98.901	Octodon_degus
ENSCAPG00000011052	-	65	84.677	ENSONIG00000018381	fubp1	55	84.677	Oreochromis_niloticus
ENSCAPG00000011052	-	67	96.703	ENSOANG00000009777	FUBP1	61	96.703	Ornithorhynchus_anatinus
ENSCAPG00000011052	-	65	82.213	ENSORLG00000003540	fubp1	57	82.213	Oryzias_latipes
ENSCAPG00000011052	-	65	83.004	ENSORLG00020005908	fubp1	63	76.408	Oryzias_latipes_hni
ENSCAPG00000011052	-	65	83.004	ENSORLG00015008779	fubp1	62	76.408	Oryzias_latipes_hsok
ENSCAPG00000011052	-	65	83.065	ENSOMEG00000021943	fubp1	56	83.065	Oryzias_melastigma
ENSCAPG00000011052	-	67	97.818	ENSOGAG00000014233	FUBP1	59	97.818	Otolemur_garnettii
ENSCAPG00000011052	-	67	98.535	ENSOARG00000013259	FUBP1	59	98.535	Ovis_aries
ENSCAPG00000011052	-	67	98.535	ENSPPRG00000000413	FUBP1	58	98.535	Panthera_pardus
ENSCAPG00000011052	-	67	98.535	ENSPTIG00000019450	FUBP1	58	98.535	Panthera_tigris_altaica
ENSCAPG00000011052	-	67	97.436	ENSPSIG00000012965	FUBP1	63	97.436	Pelodiscus_sinensis
ENSCAPG00000011052	-	65	81.641	ENSPMGG00000009060	fubp1	58	82.031	Periophthalmus_magnuspinnatus
ENSCAPG00000011052	-	67	98.535	ENSPEMG00000021802	Fubp1	57	98.535	Peromyscus_maniculatus_bairdii
ENSCAPG00000011052	-	66	66.860	ENSPMAG00000001644	-	74	66.860	Petromyzon_marinus
ENSCAPG00000011052	-	65	84.677	ENSPFOG00000000238	fubp1	53	84.677	Poecilia_formosa
ENSCAPG00000011052	-	65	84.677	ENSPLAG00000021170	fubp1	57	84.677	Poecilia_latipinna
ENSCAPG00000011052	-	65	84.677	ENSPMEG00000004747	fubp1	58	84.677	Poecilia_mexicana
ENSCAPG00000011052	-	65	84.681	ENSPREG00000017911	fubp1	62	84.681	Poecilia_reticulata
ENSCAPG00000011052	-	67	97.802	ENSPPYG00000001219	-	56	97.802	Pongo_abelii
ENSCAPG00000011052	-	67	98.535	ENSPCAG00000012617	FUBP1	57	98.535	Procavia_capensis
ENSCAPG00000011052	-	67	98.535	ENSPCOG00000024974	FUBP1	58	98.535	Propithecus_coquereli
ENSCAPG00000011052	-	65	84.677	ENSPNYG00000004552	fubp1	57	84.677	Pundamilia_nyererei
ENSCAPG00000011052	-	65	84.677	ENSPNAG00000016207	fubp1	68	84.677	Pygocentrus_nattereri
ENSCAPG00000011052	-	67	97.802	ENSRNOG00000043370	Fubp1	58	97.802	Rattus_norvegicus
ENSCAPG00000011052	-	67	98.168	ENSRBIG00000042950	FUBP1	58	98.168	Rhinopithecus_bieti
ENSCAPG00000011052	-	67	98.168	ENSRROG00000043534	FUBP1	58	98.168	Rhinopithecus_roxellana
ENSCAPG00000011052	-	67	98.535	ENSSBOG00000027299	FUBP1	61	98.298	Saimiri_boliviensis_boliviensis
ENSCAPG00000011052	-	67	96.739	ENSSHAG00000005367	FUBP1	64	98.450	Sarcophilus_harrisii
ENSCAPG00000011052	-	67	79.853	ENSSFOG00015010213	fubp1	58	79.853	Scleropages_formosus
ENSCAPG00000011052	-	66	77.737	ENSSMAG00000012029	fubp1	54	77.778	Scophthalmus_maximus
ENSCAPG00000011052	-	65	84.274	ENSSDUG00000007383	fubp1	53	84.274	Seriola_dumerili
ENSCAPG00000011052	-	65	84.274	ENSSLDG00000022863	fubp1	57	84.274	Seriola_lalandi_dorsalis
ENSCAPG00000011052	-	67	97.436	ENSSPUG00000008389	FUBP1	53	97.436	Sphenodon_punctatus
ENSCAPG00000011052	-	65	84.274	ENSSPAG00000010161	fubp1	55	84.274	Stegastes_partitus
ENSCAPG00000011052	-	67	98.168	ENSTGUG00000006841	FUBP1	62	98.168	Taeniopygia_guttata
ENSCAPG00000011052	-	65	82.540	ENSTRUG00000004615	fubp1	51	82.540	Takifugu_rubripes
ENSCAPG00000011052	-	61	84.459	ENSTNIG00000019815	-	88	84.459	Tetraodon_nigroviridis
ENSCAPG00000011052	-	67	98.535	ENSTTRG00000000096	FUBP1	57	98.535	Tursiops_truncatus
ENSCAPG00000011052	-	67	98.535	ENSVPAG00000004709	FUBP1	57	98.535	Vicugna_pacos
ENSCAPG00000011052	-	65	84.190	ENSXCOG00000019354	fubp1	57	84.190	Xiphophorus_couchianus
ENSCAPG00000011052	-	65	84.681	ENSXMAG00000007168	fubp1	63	84.681	Xiphophorus_maculatus