EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000011113 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 29103 bases
Position: chrAVPZ01000042.1:2351311-2380413
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000009737	PARP	PF00644.20	9.4e-62	1	1
ENSCAPP00000009733	PARP	PF00644.20	1.3e-61	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000013455	-	2541	-	ENSCAPP00000009737	846 (aa)	-	-
ENSCAPT00000013451	-	2832	-	ENSCAPP00000009733	943 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000011113's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000011113's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000011113	-	100	76.561	ENSG00000143799	PARP1	87	93.103	Homo_sapiens
ENSCAPG00000011113	-	99	58.804	ENSAPOG00000006414	parp1	96	58.943	Acanthochromis_polyacanthus
ENSCAPG00000011113	-	98	76.531	ENSAMEG00000014451	PARP1	99	76.531	Ailuropoda_melanoleuca
ENSCAPG00000011113	-	99	58.033	ENSACIG00000005651	parp1	99	58.469	Amphilophus_citrinellus
ENSCAPG00000011113	-	99	59.022	ENSAOCG00000021005	parp1	96	59.229	Amphiprion_ocellaris
ENSCAPG00000011113	-	99	59.022	ENSAPEG00000004784	parp1	96	59.229	Amphiprion_percula
ENSCAPG00000011113	-	99	58.279	ENSATEG00000010457	parp1	96	58.333	Anabas_testudineus
ENSCAPG00000011113	-	96	64.733	ENSAPLG00000014039	PARP1	100	64.619	Anas_platyrhynchos
ENSCAPG00000011113	-	99	61.963	ENSACAG00000006189	PARP1	99	62.398	Anolis_carolinensis
ENSCAPG00000011113	-	100	76.670	ENSANAG00000032699	PARP1	99	78.506	Aotus_nancymaae
ENSCAPG00000011113	-	99	59.430	ENSACLG00000015489	parp1	99	59.430	Astatotilapia_calliptera
ENSCAPG00000011113	-	99	57.592	ENSAMXG00000006465	parp1	99	57.895	Astyanax_mexicanus
ENSCAPG00000011113	-	100	72.917	ENSBTAG00000000837	PARP1	99	74.184	Bos_taurus
ENSCAPG00000011113	-	80	33.728	WBGene00004049	parp-1	96	39.542	Caenorhabditis_elegans
ENSCAPG00000011113	-	100	76.670	ENSCJAG00000012831	PARP1	99	78.506	Callithrix_jacchus
ENSCAPG00000011113	-	99	75.634	ENSCAFG00000016089	PARP1	100	77.160	Canis_familiaris
ENSCAPG00000011113	-	98	77.950	ENSCAFG00020001660	PARP1	99	78.054	Canis_lupus_dingo
ENSCAPG00000011113	-	100	72.697	ENSCHIG00000018072	PARP1	98	73.275	Capra_hircus
ENSCAPG00000011113	-	100	76.258	ENSTSYG00000003699	PARP1	100	76.823	Carlito_syrichta
ENSCAPG00000011113	-	100	83.297	ENSCPOG00000015643	-	99	83.297	Cavia_porcellus
ENSCAPG00000011113	-	100	77.437	ENSCCAG00000033484	PARP1	99	78.915	Cebus_capucinus
ENSCAPG00000011113	-	100	76.780	ENSCATG00000038981	PARP1	99	78.301	Cercocebus_atys
ENSCAPG00000011113	-	100	78.070	ENSCLAG00000006637	PARP1	99	78.257	Chinchilla_lanigera
ENSCAPG00000011113	-	65	82.031	ENSCHOG00000003539	PARP1	64	82.031	Choloepus_hoffmanni
ENSCAPG00000011113	-	99	65.642	ENSCPBG00000011958	PARP1	99	65.746	Chrysemys_picta_bellii
ENSCAPG00000011113	-	100	76.670	ENSCANG00000041340	PARP1	100	78.337	Colobus_angolensis_palliatus
ENSCAPG00000011113	-	98	77.277	ENSCGRG00001020559	Parp1	99	77.789	Cricetulus_griseus_chok1gshd
ENSCAPG00000011113	-	99	75.768	ENSCGRG00000004864	Parp1	100	77.926	Cricetulus_griseus_crigri
ENSCAPG00000011113	-	99	57.998	ENSCSEG00000020665	parp1	99	58.873	Cynoglossus_semilaevis
ENSCAPG00000011113	-	99	58.488	ENSCVAG00000021372	parp1	99	58.698	Cyprinodon_variegatus
ENSCAPG00000011113	-	99	58.096	ENSDARG00000019529	parp1	96	58.189	Danio_rerio
ENSCAPG00000011113	-	99	73.875	ENSDNOG00000012059	PARP1	100	75.592	Dasypus_novemcinctus
ENSCAPG00000011113	-	99	74.204	ENSDORG00000005234	Parp1	100	75.975	Dipodomys_ordii
ENSCAPG00000011113	-	98	36.773	FBgn0010247	Parp	96	36.089	Drosophila_melanogaster
ENSCAPG00000011113	-	73	95.714	ENSETEG00000013254	PARP1	72	95.714	Echinops_telfairi
ENSCAPG00000011113	-	99	48.283	ENSEBUG00000005820	parp1	100	49.043	Eptatretus_burgeri
ENSCAPG00000011113	-	96	77.059	ENSEASG00005013275	PARP1	98	77.083	Equus_asinus_asinus
ENSCAPG00000011113	-	99	76.358	ENSECAG00000019207	PARP1	99	77.789	Equus_caballus
ENSCAPG00000011113	-	99	72.687	ENSEEUG00000012253	PARP1	99	72.245	Erinaceus_europaeus
ENSCAPG00000011113	-	99	59.231	ENSELUG00000017336	parp1	99	58.856	Esox_lucius
ENSCAPG00000011113	-	88	88.494	ENSFCAG00000005777	PARP1	99	77.459	Felis_catus
ENSCAPG00000011113	-	99	65.088	ENSFALG00000011578	PARP1	100	65.231	Ficedula_albicollis
ENSCAPG00000011113	-	100	77.303	ENSFDAG00000017662	PARP1	100	78.931	Fukomys_damarensis
ENSCAPG00000011113	-	99	58.478	ENSFHEG00000001117	parp1	99	58.561	Fundulus_heteroclitus
ENSCAPG00000011113	-	99	57.987	ENSGMOG00000014929	parp1	99	58.367	Gadus_morhua
ENSCAPG00000011113	-	99	65.677	ENSGALG00000009228	PARP1	99	65.781	Gallus_gallus
ENSCAPG00000011113	-	99	58.079	ENSGAFG00000010450	parp1	99	58.079	Gambusia_affinis
ENSCAPG00000011113	-	99	56.771	ENSGACG00000011280	parp1	96	57.157	Gasterosteus_aculeatus
ENSCAPG00000011113	-	99	65.423	ENSGAGG00000010066	PARP1	99	64.995	Gopherus_agassizii
ENSCAPG00000011113	-	100	76.232	ENSGGOG00000006308	PARP1	99	77.789	Gorilla_gorilla
ENSCAPG00000011113	-	99	58.932	ENSHBUG00000010490	parp1	99	58.932	Haplochromis_burtoni
ENSCAPG00000011113	-	100	77.108	ENSHGLG00000003992	PARP1	96	77.108	Heterocephalus_glaber_female
ENSCAPG00000011113	-	100	77.209	ENSHGLG00100016965	PARP1	96	77.209	Heterocephalus_glaber_male
ENSCAPG00000011113	-	99	57.923	ENSHCOG00000011619	parp1	99	58.182	Hippocampus_comes
ENSCAPG00000011113	-	99	56.926	ENSIPUG00000020250	parp1	99	57.215	Ictalurus_punctatus
ENSCAPG00000011113	-	100	77.218	ENSSTOG00000016000	PARP1	99	78.608	Ictidomys_tridecemlineatus
ENSCAPG00000011113	-	98	76.380	ENSJJAG00000023497	Parp1	99	77.301	Jaculus_jaculus
ENSCAPG00000011113	-	99	58.932	ENSKMAG00000011627	parp1	99	58.985	Kryptolebias_marmoratus
ENSCAPG00000011113	-	99	58.261	ENSLBEG00000013376	parp1	99	58.451	Labrus_bergylta
ENSCAPG00000011113	-	98	46.951	ENSLACG00000002735	PARP1	99	47.321	Latimeria_chalumnae
ENSCAPG00000011113	-	99	61.038	ENSLOCG00000015798	parp1	96	61.389	Lepisosteus_oculatus
ENSCAPG00000011113	-	99	73.436	ENSLAFG00000007830	PARP1	100	75.051	Loxodonta_africana
ENSCAPG00000011113	-	100	76.780	ENSMFAG00000002526	PARP1	99	78.199	Macaca_fascicularis
ENSCAPG00000011113	-	100	77.033	ENSMMUG00000021820	PARP1	99	78.439	Macaca_mulatta
ENSCAPG00000011113	-	100	76.780	ENSMNEG00000034074	PARP1	99	78.301	Macaca_nemestrina
ENSCAPG00000011113	-	100	76.419	ENSMLEG00000012344	PARP1	99	77.959	Mandrillus_leucophaeus
ENSCAPG00000011113	-	99	59.539	ENSMAMG00000020652	parp1	99	59.539	Mastacembelus_armatus
ENSCAPG00000011113	-	99	59.150	ENSMZEG00005016907	parp1	99	59.150	Maylandia_zebra
ENSCAPG00000011113	-	99	65.457	ENSMGAG00000007760	PARP1	100	65.676	Meleagris_gallopavo
ENSCAPG00000011113	-	98	77.277	ENSMAUG00000008306	Parp1	99	77.687	Mesocricetus_auratus
ENSCAPG00000011113	-	98	76.971	ENSMICG00000017076	PARP1	99	76.971	Microcebus_murinus
ENSCAPG00000011113	-	98	76.561	ENSMOCG00000014315	Parp1	99	76.970	Microtus_ochrogaster
ENSCAPG00000011113	-	99	58.224	ENSMMOG00000015966	parp1	99	58.342	Mola_mola
ENSCAPG00000011113	-	99	68.543	ENSMODG00000006076	PARP1	96	69.356	Monodelphis_domestica
ENSCAPG00000011113	-	99	57.361	ENSMALG00000004057	parp1	96	57.215	Monopterus_albus
ENSCAPG00000011113	-	99	75.904	MGP_CAROLIEiJ_G0014978	Parp1	100	78.571	Mus_caroli
ENSCAPG00000011113	-	99	75.794	ENSMUSG00000026496	Parp1	99	78.571	Mus_musculus
ENSCAPG00000011113	-	99	75.794	MGP_SPRETEiJ_G0015777	Parp1	100	78.571	Mus_spretus
ENSCAPG00000011113	-	98	75.615	ENSMPUG00000004585	PARP1	99	75.615	Mustela_putorius_furo
ENSCAPG00000011113	-	90	60.603	ENSMLUG00000012285	PARP1	98	60.156	Myotis_lucifugus
ENSCAPG00000011113	-	100	75.027	ENSNGAG00000003885	Parp1	99	75.356	Nannospalax_galili
ENSCAPG00000011113	-	99	59.320	ENSNBRG00000017434	parp1	99	59.320	Neolamprologus_brichardi
ENSCAPG00000011113	-	100	78.881	ENSNLEG00000013905	PARP1	99	80.319	Nomascus_leucogenys
ENSCAPG00000011113	-	75	78.466	ENSMEUG00000007720	PARP1	86	78.466	Notamacropus_eugenii
ENSCAPG00000011113	-	100	75.246	ENSOPRG00000011722	PARP1	99	77.073	Ochotona_princeps
ENSCAPG00000011113	-	100	76.316	ENSODEG00000007424	PARP1	99	76.316	Octodon_degus
ENSCAPG00000011113	-	99	59.477	ENSONIG00000013486	parp1	99	59.477	Oreochromis_niloticus
ENSCAPG00000011113	-	99	69.087	ENSOANG00000001488	PARP1	100	69.262	Ornithorhynchus_anatinus
ENSCAPG00000011113	-	98	76.970	ENSOCUG00000017820	PARP1	99	77.482	Oryctolagus_cuniculus
ENSCAPG00000011113	-	99	58.061	ENSORLG00000013691	parp1	99	58.579	Oryzias_latipes
ENSCAPG00000011113	-	99	58.308	ENSORLG00020001074	parp1	99	58.308	Oryzias_latipes_hni
ENSCAPG00000011113	-	99	58.279	ENSORLG00015007090	parp1	99	58.782	Oryzias_latipes_hsok
ENSCAPG00000011113	-	98	76.356	ENSOGAG00000016206	PARP1	99	76.356	Otolemur_garnettii
ENSCAPG00000011113	-	100	73.026	ENSOARG00000000811	PARP1	98	73.604	Ovis_aries
ENSCAPG00000011113	-	100	76.013	ENSPPAG00000040862	PARP1	99	77.584	Pan_paniscus
ENSCAPG00000011113	-	99	75.412	ENSPPRG00000003528	PARP1	100	77.390	Panthera_pardus
ENSCAPG00000011113	-	97	65.704	ENSPTIG00000009102	PARP1	98	67.884	Panthera_tigris_altaica
ENSCAPG00000011113	-	100	76.013	ENSPTRG00000002049	PARP1	99	77.584	Pan_troglodytes
ENSCAPG00000011113	-	100	76.915	ENSPANG00000011198	PARP1	99	78.425	Papio_anubis
ENSCAPG00000011113	-	99	57.503	ENSPKIG00000006039	parp1	100	58.111	Paramormyrops_kingsleyae
ENSCAPG00000011113	-	99	64.693	ENSPSIG00000016374	PARP1	100	65.036	Pelodiscus_sinensis
ENSCAPG00000011113	-	99	56.114	ENSPMGG00000008936	parp1	99	56.371	Periophthalmus_magnuspinnatus
ENSCAPG00000011113	-	98	77.687	ENSPEMG00000020230	Parp1	99	77.687	Peromyscus_maniculatus_bairdii
ENSCAPG00000011113	-	99	68.137	ENSPCIG00000006436	PARP1	96	69.388	Phascolarctos_cinereus
ENSCAPG00000011113	-	99	58.188	ENSPFOG00000002342	parp1	99	58.291	Poecilia_formosa
ENSCAPG00000011113	-	99	58.734	ENSPLAG00000000909	parp1	99	58.698	Poecilia_latipinna
ENSCAPG00000011113	-	99	58.734	ENSPMEG00000013979	parp1	99	58.800	Poecilia_mexicana
ENSCAPG00000011113	-	99	58.297	ENSPREG00000001114	parp1	99	58.494	Poecilia_reticulata
ENSCAPG00000011113	-	100	76.780	ENSPPYG00000000164	PARP1	100	78.395	Pongo_abelii
ENSCAPG00000011113	-	70	79.012	ENSPCAG00000005558	-	62	80.247	Procavia_capensis
ENSCAPG00000011113	-	98	77.482	ENSPCOG00000016918	PARP1	99	77.687	Propithecus_coquereli
ENSCAPG00000011113	-	83	96.429	ENSPVAG00000005543	PARP1	71	96.429	Pteropus_vampyrus
ENSCAPG00000011113	-	99	59.430	ENSPNYG00000009702	parp1	99	59.430	Pundamilia_nyererei
ENSCAPG00000011113	-	99	59.441	ENSPNAG00000002787	parp1	99	59.834	Pygocentrus_nattereri
ENSCAPG00000011113	-	99	74.725	ENSRNOG00000003084	Parp1	99	76.176	Rattus_norvegicus
ENSCAPG00000011113	-	100	76.561	ENSRBIG00000044893	PARP1	99	78.096	Rhinopithecus_bieti
ENSCAPG00000011113	-	100	55.630	ENSRROG00000040615	-	96	56.844	Rhinopithecus_roxellana
ENSCAPG00000011113	-	100	76.561	ENSRROG00000029280	PARP1	99	78.096	Rhinopithecus_roxellana
ENSCAPG00000011113	-	100	76.780	ENSSBOG00000010144	PARP1	99	78.506	Saimiri_boliviensis_boliviensis
ENSCAPG00000011113	-	99	68.619	ENSSHAG00000001991	PARP1	100	69.846	Sarcophilus_harrisii
ENSCAPG00000011113	-	99	58.983	ENSSFOG00015020017	parp1	99	59.293	Scleropages_formosus
ENSCAPG00000011113	-	99	59.511	ENSSMAG00000013799	parp1	99	59.585	Scophthalmus_maximus
ENSCAPG00000011113	-	99	58.061	ENSSDUG00000016626	parp1	99	58.130	Seriola_dumerili
ENSCAPG00000011113	-	99	58.061	ENSSLDG00000006384	parp1	99	58.130	Seriola_lalandi_dorsalis
ENSCAPG00000011113	-	99	63.737	ENSSPUG00000007790	PARP1	99	64.040	Sphenodon_punctatus
ENSCAPG00000011113	-	99	59.427	ENSSPAG00000019074	parp1	99	59.784	Stegastes_partitus
ENSCAPG00000011113	-	100	77.051	ENSSSCG00000023660	PARP1	99	78.778	Sus_scrofa
ENSCAPG00000011113	-	98	64.294	ENSTGUG00000004260	-	100	64.961	Taeniopygia_guttata
ENSCAPG00000011113	-	99	57.596	ENSTRUG00000014490	parp1	99	57.900	Takifugu_rubripes
ENSCAPG00000011113	-	99	57.065	ENSTNIG00000016384	parp1	99	57.404	Tetraodon_nigroviridis
ENSCAPG00000011113	-	82	95.745	ENSTBEG00000002364	PARP1	92	95.745	Tupaia_belangeri
ENSCAPG00000011113	-	85	85.425	ENSTTRG00000000188	PARP1	84	86.263	Tursiops_truncatus
ENSCAPG00000011113	-	99	75.604	ENSUAMG00000014388	PARP1	100	76.923	Ursus_americanus
ENSCAPG00000011113	-	99	65.590	ENSUMAG00000014555	PARP1	99	67.179	Ursus_maritimus
ENSCAPG00000011113	-	69	85.308	ENSVPAG00000011411	PARP1	69	86.525	Vicugna_pacos
ENSCAPG00000011113	-	99	75.524	ENSVVUG00000001655	PARP1	100	77.058	Vulpes_vulpes
ENSCAPG00000011113	-	99	61.462	ENSXETG00000022610	parp1	97	61.895	Xenopus_tropicalis
ENSCAPG00000011113	-	99	57.751	ENSXMAG00000003632	parp1	99	57.751	Xiphophorus_maculatus