EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000011313 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 6055 bases
Position: chrAVPZ01000744.1:5116181-5122235
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000009962	Endonuclease_5	PF04493.14	3.6e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000013685	-	666	-	ENSCAPP00000009962	222 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000011313's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000011313's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000011313	-	86	70.256	ENSG00000173818	ENDOV	100	80.000	Homo_sapiens
ENSCAPG00000011313	-	73	56.627	ENSAPOG00000007037	ENDOV	66	56.627	Acanthochromis_polyacanthus
ENSCAPG00000011313	-	84	76.042	ENSAMEG00000015304	ENDOV	71	75.248	Ailuropoda_melanoleuca
ENSCAPG00000011313	-	52	54.783	ENSACIG00000020171	ENDOV	81	63.855	Amphilophus_citrinellus
ENSCAPG00000011313	-	73	56.627	ENSAOCG00000018770	ENDOV	66	56.627	Amphiprion_ocellaris
ENSCAPG00000011313	-	73	55.952	ENSATEG00000023498	ENDOV	66	55.952	Anabas_testudineus
ENSCAPG00000011313	-	74	65.089	ENSAPLG00000003471	ENDOV	67	65.089	Anas_platyrhynchos
ENSCAPG00000011313	-	68	64.516	ENSACAG00000015645	ENDOV	64	64.516	Anolis_carolinensis
ENSCAPG00000011313	-	93	69.194	ENSANAG00000029466	ENDOV	99	73.333	Aotus_nancymaae
ENSCAPG00000011313	-	72	57.576	ENSACLG00000010335	ENDOV	65	57.576	Astatotilapia_calliptera
ENSCAPG00000011313	-	68	45.098	ENSAMXG00000015972	ENDOV	93	44.516	Astyanax_mexicanus
ENSCAPG00000011313	-	91	67.308	ENSBTAG00000015339	ENDOV	97	67.308	Bos_taurus
ENSCAPG00000011313	-	86	68.718	ENSCJAG00000003329	ENDOV	99	71.429	Callithrix_jacchus
ENSCAPG00000011313	-	89	70.792	ENSCAFG00000005684	ENDOV	70	70.792	Canis_familiaris
ENSCAPG00000011313	-	89	70.792	ENSCAFG00020008671	ENDOV	69	70.792	Canis_lupus_dingo
ENSCAPG00000011313	-	90	68.293	ENSCHIG00000021238	ENDOV	95	68.293	Capra_hircus
ENSCAPG00000011313	-	86	75.385	ENSTSYG00000005646	ENDOV	87	85.556	Carlito_syrichta
ENSCAPG00000011313	-	79	82.320	ENSCPOG00000005529	ENDOV	68	82.320	Cavia_porcellus
ENSCAPG00000011313	-	88	67.000	ENSCCAG00000035297	ENDOV	99	75.238	Cebus_capucinus
ENSCAPG00000011313	-	73	75.000	ENSCATG00000042834	ENDOV	86	81.111	Cercocebus_atys
ENSCAPG00000011313	-	78	81.006	ENSCLAG00000006305	ENDOV	100	81.006	Chinchilla_lanigera
ENSCAPG00000011313	-	92	63.850	ENSCSAG00000002315	ENDOV	67	66.029	Chlorocebus_sabaeus
ENSCAPG00000011313	-	80	62.500	ENSCPBG00000010525	ENDOV	97	62.500	Chrysemys_picta_bellii
ENSCAPG00000011313	-	73	37.126	ENSCSAVG00000010293	-	88	37.126	Ciona_savignyi
ENSCAPG00000011313	-	75	64.535	ENSCANG00000020058	ENDOV	79	79.545	Colobus_angolensis_palliatus
ENSCAPG00000011313	-	93	71.090	ENSCGRG00001000788	Endov	91	70.286	Cricetulus_griseus_chok1gshd
ENSCAPG00000011313	-	93	71.090	ENSCGRG00000016362	Endov	91	70.286	Cricetulus_griseus_crigri
ENSCAPG00000011313	-	72	60.000	ENSCSEG00000015214	ENDOV	64	60.000	Cynoglossus_semilaevis
ENSCAPG00000011313	-	72	60.000	ENSCVAG00000007166	ENDOV	65	60.000	Cyprinodon_variegatus
ENSCAPG00000011313	-	87	66.000	ENSETEG00000014048	ENDOV	71	66.000	Echinops_telfairi
ENSCAPG00000011313	-	55	53.543	ENSEBUG00000011943	ENDOV	50	53.543	Eptatretus_burgeri
ENSCAPG00000011313	-	91	75.728	ENSEASG00005005482	ENDOV	56	75.728	Equus_asinus_asinus
ENSCAPG00000011313	-	91	75.243	ENSECAG00000012208	ENDOV	56	75.243	Equus_caballus
ENSCAPG00000011313	-	77	52.000	ENSELUG00000008464	ENDOV	65	56.970	Esox_lucius
ENSCAPG00000011313	-	86	72.308	ENSFCAG00000031769	ENDOV	91	83.516	Felis_catus
ENSCAPG00000011313	-	74	59.172	ENSFALG00000012475	ENDOV	61	59.172	Ficedula_albicollis
ENSCAPG00000011313	-	91	67.290	ENSFDAG00000013275	ENDOV	76	67.290	Fukomys_damarensis
ENSCAPG00000011313	-	72	53.614	ENSGMOG00000017580	ENDOV	71	53.614	Gadus_morhua
ENSCAPG00000011313	-	91	53.555	ENSGALG00000006963	ENDOV	99	53.555	Gallus_gallus
ENSCAPG00000011313	-	69	56.329	ENSGAFG00000007756	ENDOV	64	56.329	Gambusia_affinis
ENSCAPG00000011313	-	76	54.913	ENSGACG00000018198	ENDOV	71	54.913	Gasterosteus_aculeatus
ENSCAPG00000011313	-	68	62.420	ENSGAGG00000022130	ENDOV	58	62.420	Gopherus_agassizii
ENSCAPG00000011313	-	92	68.421	ENSGGOG00000010209	ENDOV	88	66.351	Gorilla_gorilla
ENSCAPG00000011313	-	72	57.576	ENSHBUG00000001543	ENDOV	65	57.576	Haplochromis_burtoni
ENSCAPG00000011313	-	78	78.771	ENSHGLG00000004976	ENDOV	100	78.771	Heterocephalus_glaber_female
ENSCAPG00000011313	-	71	51.515	ENSHCOG00000013813	ENDOV	61	51.515	Hippocampus_comes
ENSCAPG00000011313	-	72	57.576	ENSIPUG00000022104	endov	66	57.576	Ictalurus_punctatus
ENSCAPG00000011313	-	87	72.864	ENSSTOG00000027436	ENDOV	97	72.864	Ictidomys_tridecemlineatus
ENSCAPG00000011313	-	77	75.141	ENSJJAG00000014912	-	99	75.141	Jaculus_jaculus
ENSCAPG00000011313	-	68	56.774	ENSKMAG00000011618	ENDOV	54	56.774	Kryptolebias_marmoratus
ENSCAPG00000011313	-	72	55.758	ENSLBEG00000013183	ENDOV	65	55.758	Labrus_bergylta
ENSCAPG00000011313	-	73	60.714	ENSLACG00000016911	ENDOV	66	60.714	Latimeria_chalumnae
ENSCAPG00000011313	-	68	57.051	ENSLOCG00000013414	ENDOV	55	57.051	Lepisosteus_oculatus
ENSCAPG00000011313	-	92	69.378	ENSLAFG00000026661	ENDOV	95	69.378	Loxodonta_africana
ENSCAPG00000011313	-	73	75.000	ENSMFAG00000044601	ENDOV	86	81.111	Macaca_fascicularis
ENSCAPG00000011313	-	92	66.351	ENSMMUG00000001285	ENDOV	86	81.111	Macaca_mulatta
ENSCAPG00000011313	-	73	75.000	ENSMNEG00000020009	ENDOV	86	81.111	Macaca_nemestrina
ENSCAPG00000011313	-	73	50.562	ENSMLEG00000032858	ENDOV	79	84.091	Mandrillus_leucophaeus
ENSCAPG00000011313	-	75	55.233	ENSMAMG00000005788	ENDOV	67	55.233	Mastacembelus_armatus
ENSCAPG00000011313	-	95	67.281	ENSMAUG00000021480	Endov	86	67.281	Mesocricetus_auratus
ENSCAPG00000011313	-	68	75.641	ENSMICG00000037907	ENDOV	86	84.444	Microcebus_murinus
ENSCAPG00000011313	-	92	68.095	ENSMOCG00000019008	Endov	99	70.166	Microtus_ochrogaster
ENSCAPG00000011313	-	68	57.595	ENSMMOG00000006981	ENDOV	66	57.595	Mola_mola
ENSCAPG00000011313	-	76	64.740	ENSMODG00000002372	ENDOV	67	64.740	Monodelphis_domestica
ENSCAPG00000011313	-	61	57.447	ENSMALG00000006274	ENDOV	53	57.447	Monopterus_albus
ENSCAPG00000011313	-	93	67.453	MGP_CAROLIEiJ_G0017500	Endov	84	74.405	Mus_caroli
ENSCAPG00000011313	-	95	65.596	ENSMUSG00000039850	Endov	84	74.405	Mus_musculus
ENSCAPG00000011313	-	93	67.453	MGP_PahariEiJ_G0018627	Endov	84	75.000	Mus_pahari
ENSCAPG00000011313	-	93	66.981	MGP_SPRETEiJ_G0018344	Endov	83	66.981	Mus_spretus
ENSCAPG00000011313	-	89	72.906	ENSMPUG00000012082	ENDOV	72	72.906	Mustela_putorius_furo
ENSCAPG00000011313	-	77	76.000	ENSNGAG00000021532	-	98	76.000	Nannospalax_galili
ENSCAPG00000011313	-	92	67.464	ENSNLEG00000015754	ENDOV	86	81.111	Nomascus_leucogenys
ENSCAPG00000011313	-	68	72.903	ENSMEUG00000010606	ENDOV	71	72.903	Notamacropus_eugenii
ENSCAPG00000011313	-	77	74.011	ENSOPRG00000013691	ENDOV	73	74.011	Ochotona_princeps
ENSCAPG00000011313	-	78	81.006	ENSODEG00000009857	-	100	81.006	Octodon_degus
ENSCAPG00000011313	-	71	53.988	ENSONIG00000003328	ENDOV	66	53.988	Oreochromis_niloticus
ENSCAPG00000011313	-	77	68.182	ENSOCUG00000024779	ENDOV	68	68.182	Oryctolagus_cuniculus
ENSCAPG00000011313	-	73	57.831	ENSORLG00015014346	ENDOV	96	57.831	Oryzias_latipes_hsok
ENSCAPG00000011313	-	73	59.036	ENSOMEG00000006436	ENDOV	66	59.036	Oryzias_melastigma
ENSCAPG00000011313	-	89	71.782	ENSOGAG00000027594	ENDOV	71	71.782	Otolemur_garnettii
ENSCAPG00000011313	-	88	69.000	ENSOARG00000000766	ENDOV	66	69.000	Ovis_aries
ENSCAPG00000011313	-	92	66.986	ENSPPAG00000034689	ENDOV	87	81.111	Pan_paniscus
ENSCAPG00000011313	-	86	72.308	ENSPPRG00000011602	ENDOV	68	72.308	Panthera_pardus
ENSCAPG00000011313	-	96	63.470	ENSPTRG00000009745	ENDOV	87	81.111	Pan_troglodytes
ENSCAPG00000011313	-	73	74.405	ENSPANG00000019621	ENDOV	86	81.111	Papio_anubis
ENSCAPG00000011313	-	72	55.758	ENSPKIG00000006685	ENDOV	65	55.758	Paramormyrops_kingsleyae
ENSCAPG00000011313	-	80	60.317	ENSPSIG00000007239	ENDOV	65	60.317	Pelodiscus_sinensis
ENSCAPG00000011313	-	68	50.296	ENSPMGG00000010309	ENDOV	97	55.340	Periophthalmus_magnuspinnatus
ENSCAPG00000011313	-	93	67.299	ENSPEMG00000009075	Endov	94	71.429	Peromyscus_maniculatus_bairdii
ENSCAPG00000011313	-	79	68.889	ENSPCIG00000029110	ENDOV	71	61.972	Phascolarctos_cinereus
ENSCAPG00000011313	-	72	59.394	ENSPFOG00000016616	ENDOV	65	59.394	Poecilia_formosa
ENSCAPG00000011313	-	72	59.394	ENSPMEG00000002323	ENDOV	65	59.394	Poecilia_mexicana
ENSCAPG00000011313	-	68	54.321	ENSPREG00000002988	ENDOV	74	65.823	Poecilia_reticulata
ENSCAPG00000011313	-	92	66.507	ENSPPYG00000008721	ENDOV	67	66.507	Pongo_abelii
ENSCAPG00000011313	-	87	66.162	ENSPCAG00000011432	ENDOV	70	66.162	Procavia_capensis
ENSCAPG00000011313	-	87	75.253	ENSPCOG00000027446	ENDOV	70	75.253	Propithecus_coquereli
ENSCAPG00000011313	-	87	72.727	ENSPVAG00000014077	ENDOV	70	72.727	Pteropus_vampyrus
ENSCAPG00000011313	-	72	56.970	ENSPNAG00000028276	ENDOV	65	56.970	Pygocentrus_nattereri
ENSCAPG00000011313	-	91	69.082	ENSRNOG00000003699	Endov	98	75.000	Rattus_norvegicus
ENSCAPG00000011313	-	89	62.441	ENSRBIG00000042566	ENDOV	86	81.111	Rhinopithecus_bieti
ENSCAPG00000011313	-	89	63.850	ENSRROG00000037314	ENDOV	86	81.111	Rhinopithecus_roxellana
ENSCAPG00000011313	-	88	67.500	ENSSBOG00000020840	ENDOV	99	73.333	Saimiri_boliviensis_boliviensis
ENSCAPG00000011313	-	73	65.269	ENSSHAG00000008416	ENDOV	100	65.269	Sarcophilus_harrisii
ENSCAPG00000011313	-	74	55.882	ENSSFOG00015004419	endov	67	55.882	Scleropages_formosus
ENSCAPG00000011313	-	70	56.250	ENSSMAG00000011539	ENDOV	80	56.250	Scophthalmus_maximus
ENSCAPG00000011313	-	72	58.182	ENSSDUG00000003581	ENDOV	64	58.182	Seriola_dumerili
ENSCAPG00000011313	-	68	55.769	ENSSLDG00000001821	ENDOV	62	55.769	Seriola_lalandi_dorsalis
ENSCAPG00000011313	-	73	59.639	ENSSPAG00000014755	ENDOV	66	59.639	Stegastes_partitus
ENSCAPG00000011313	-	88	72.139	ENSSSCG00000030277	ENDOV	96	72.139	Sus_scrofa
ENSCAPG00000011313	-	73	58.721	ENSTGUG00000003057	ENDOV	72	59.880	Taeniopygia_guttata
ENSCAPG00000011313	-	68	45.695	ENSTRUG00000004474	ENDOV	57	45.695	Takifugu_rubripes
ENSCAPG00000011313	-	68	55.484	ENSTNIG00000006611	-	65	55.484	Tetraodon_nigroviridis
ENSCAPG00000011313	-	87	63.819	ENSTTRG00000000545	ENDOV	70	63.819	Tursiops_truncatus
ENSCAPG00000011313	-	84	75.521	ENSUAMG00000027555	ENDOV	99	74.272	Ursus_americanus
ENSCAPG00000011313	-	91	71.981	ENSUMAG00000015201	ENDOV	69	77.222	Ursus_maritimus
ENSCAPG00000011313	-	79	71.667	ENSVVUG00000018497	-	100	71.667	Vulpes_vulpes
ENSCAPG00000011313	-	69	57.862	ENSXCOG00000011592	ENDOV	79	57.862	Xiphophorus_couchianus
ENSCAPG00000011313	-	72	59.394	ENSXMAG00000017948	ENDOV	94	61.798	Xiphophorus_maculatus