EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000011473 (Gene tree)
Gene ID: -
Gene Symbol: SRRM1
Alias: MGC39488|POP101|SRM160
Full Name: serine and arginine repetitive matrix 1
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Minus strand
Length: 26362 bases
Position: chrAVPZ01000178.1:11122303-11148664
Accession: 16638
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000010197	PWI	PF01480.17	1.3e-17	1	1
ENSCAPP00000010196	PWI	PF01480.17	1.3e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000013921	SRRM1-201	2664	-	ENSCAPP00000010196	887 (aa)	-	-
ENSCAPT00000013922	SRRM1-202	2622	-	ENSCAPP00000010197	873 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000011473's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000011473's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000011473	SRRM1	100	94.649	ENSG00000133226	SRRM1	100	94.436	Homo_sapiens
ENSCAPG00000011473	SRRM1	100	93.963	ENSAMEG00000010075	SRRM1	99	93.963	Ailuropoda_melanoleuca
ENSCAPG00000011473	SRRM1	61	64.646	ENSAPLG00000002066	SRRM1	59	75.801	Anas_platyrhynchos
ENSCAPG00000011473	SRRM1	100	94.292	ENSANAG00000035606	SRRM1	99	94.292	Aotus_nancymaae
ENSCAPG00000011473	SRRM1	100	94.631	ENSBTAG00000013772	SRRM1	99	94.631	Bos_taurus
ENSCAPG00000011473	SRRM1	88	95.082	ENSCAFG00020020948	SRRM1	98	95.082	Canis_lupus_dingo
ENSCAPG00000011473	SRRM1	100	93.377	ENSCHIG00000014656	SRRM1	99	93.377	Capra_hircus
ENSCAPG00000011473	SRRM1	100	94.537	ENSTSYG00000006782	SRRM1	99	94.537	Carlito_syrichta
ENSCAPG00000011473	SRRM1	100	98.331	ENSCPOG00000015594	SRRM1	99	98.331	Cavia_porcellus
ENSCAPG00000011473	SRRM1	100	94.091	ENSCCAG00000029474	SRRM1	99	94.091	Cebus_capucinus
ENSCAPG00000011473	SRRM1	100	94.426	ENSCATG00000031303	SRRM1	99	94.426	Cercocebus_atys
ENSCAPG00000011473	SRRM1	100	95.705	ENSCLAG00000014592	SRRM1	99	95.705	Chinchilla_lanigera
ENSCAPG00000011473	SRRM1	73	90.833	ENSCHOG00000000027	SRRM1	71	90.833	Choloepus_hoffmanni
ENSCAPG00000011473	SRRM1	100	94.426	ENSCANG00000028271	SRRM1	99	94.426	Colobus_angolensis_palliatus
ENSCAPG00000011473	SRRM1	100	93.956	ENSEASG00005004270	SRRM1	99	93.956	Equus_asinus_asinus
ENSCAPG00000011473	SRRM1	100	94.085	ENSECAG00000026981	SRRM1	99	94.085	Equus_caballus
ENSCAPG00000011473	SRRM1	100	94.537	ENSFCAG00000000678	-	99	94.537	Felis_catus
ENSCAPG00000011473	SRRM1	100	95.705	ENSFDAG00000009903	SRRM1	99	95.705	Fukomys_damarensis
ENSCAPG00000011473	SRRM1	100	94.537	ENSGGOG00000005209	SRRM1	99	94.537	Gorilla_gorilla
ENSCAPG00000011473	SRRM1	100	95.705	ENSHGLG00000017105	SRRM1	99	95.705	Heterocephalus_glaber_female
ENSCAPG00000011473	SRRM1	100	95.414	ENSHGLG00100016772	SRRM1	99	95.414	Heterocephalus_glaber_male
ENSCAPG00000011473	SRRM1	100	95.170	ENSSTOG00000014640	SRRM1	99	95.170	Ictidomys_tridecemlineatus
ENSCAPG00000011473	SRRM1	100	91.542	ENSLAFG00000013830	SRRM1	99	91.542	Loxodonta_africana
ENSCAPG00000011473	SRRM1	100	94.621	ENSMFAG00000025726	SRRM1	100	94.132	Macaca_fascicularis
ENSCAPG00000011473	SRRM1	61	76.679	ENSMFAG00000038841	-	61	75.403	Macaca_fascicularis
ENSCAPG00000011473	SRRM1	100	94.512	ENSMMUG00000006645	SRRM1	99	94.512	Macaca_mulatta
ENSCAPG00000011473	SRRM1	56	77.621	ENSMMUG00000039269	-	59	75.202	Macaca_mulatta
ENSCAPG00000011473	SRRM1	100	94.537	ENSMNEG00000039415	SRRM1	99	94.537	Macaca_nemestrina
ENSCAPG00000011473	SRRM1	72	93.220	ENSMLEG00000038030	-	90	93.522	Mandrillus_leucophaeus
ENSCAPG00000011473	SRRM1	61	68.598	ENSMLEG00000032221	-	58	70.707	Mandrillus_leucophaeus
ENSCAPG00000011473	SRRM1	100	94.621	ENSMICG00000006553	SRRM1	99	94.621	Microcebus_murinus
ENSCAPG00000011473	SRRM1	100	94.649	ENSNLEG00000008966	SRRM1	99	94.649	Nomascus_leucogenys
ENSCAPG00000011473	SRRM1	75	81.445	ENSMEUG00000014704	SRRM1	61	82.275	Notamacropus_eugenii
ENSCAPG00000011473	SRRM1	100	93.969	ENSOCUG00000008438	SRRM1	99	93.969	Oryctolagus_cuniculus
ENSCAPG00000011473	SRRM1	100	94.402	ENSOGAG00000010210	SRRM1	99	94.402	Otolemur_garnettii
ENSCAPG00000011473	SRRM1	92	94.869	ENSOARG00000006453	SRRM1	98	94.869	Ovis_aries
ENSCAPG00000011473	SRRM1	100	94.537	ENSPPAG00000043918	SRRM1	99	94.537	Pan_paniscus
ENSCAPG00000011473	SRRM1	100	94.537	ENSPPRG00000002509	SRRM1	99	94.537	Panthera_pardus
ENSCAPG00000011473	SRRM1	100	94.731	ENSPTRG00000000349	SRRM1	100	94.251	Pan_troglodytes
ENSCAPG00000011473	SRRM1	56	76.566	ENSPANG00000035568	-	59	71.313	Papio_anubis
ENSCAPG00000011473	SRRM1	100	93.798	ENSPANG00000010194	SRRM1	99	93.798	Papio_anubis
ENSCAPG00000011473	SRRM1	100	94.072	ENSPPYG00000001716	SRRM1	99	94.072	Pongo_abelii
ENSCAPG00000011473	SRRM1	100	93.969	ENSPCOG00000021311	SRRM1	99	93.969	Propithecus_coquereli
ENSCAPG00000011473	SRRM1	100	93.963	ENSPVAG00000005836	SRRM1	99	93.963	Pteropus_vampyrus
ENSCAPG00000011473	SRRM1	100	94.314	ENSRROG00000035151	SRRM1	99	94.314	Rhinopithecus_roxellana
ENSCAPG00000011473	SRRM1	88	94.796	ENSSBOG00000019884	SRRM1	98	94.796	Saimiri_boliviensis_boliviensis
ENSCAPG00000011473	SRRM1	59	91.475	ENSSARG00000013718	SRRM1	58	90.164	Sorex_araneus
ENSCAPG00000011473	SRRM1	100	94.072	ENSSSCG00000032947	SRRM1	100	93.857	Sus_scrofa
ENSCAPG00000011473	SRRM1	100	94.279	ENSTBEG00000000100	SRRM1	99	94.279	Tupaia_belangeri
ENSCAPG00000011473	SRRM1	100	93.304	ENSTTRG00000009365	SRRM1	100	93.304	Tursiops_truncatus
ENSCAPG00000011473	SRRM1	100	87.583	ENSVVUG00000026966	SRRM1	99	87.583	Vulpes_vulpes