EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAPG00000011521 (Gene tree)
Gene ID: -
Gene Symbol: HNRNPF
Alias: HNRPF
Full Name: heterogeneous nuclear ribonucleoprotein F
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Minus strand
Length: 1248 bases
Position: chrAVPZ01000589.1:1087586-1088833
Accession: 5039
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000010215	zf-RNPHF	PF08080.12	1.1e-22	1	1
ENSCAPP00000010215	RRM_1	PF00076.22	5e-29	1	2
ENSCAPP00000010215	RRM_1	PF00076.22	5e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000013940	HNRNPF-201	1248	-	ENSCAPP00000010215	415 (aa)	-	UPI000184D220

Gene Model

Click here to download ENSCAPG00000011521's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000011521's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAPG00000011521	HNRNPF	85	38.757	ENSCAPG00000000156	GRSF1	98	38.757
ENSCAPG00000011521	HNRNPF	92	67.277	ENSCAPG00000000003	-	96	65.942
ENSCAPG00000011521	HNRNPF	66	68.323	ENSCAPG00000010920	-	88	68.323
ENSCAPG00000011521	HNRNPF	92	70.157	ENSCAPG00000007268	-	96	68.599
ENSCAPG00000011521	HNRNPF	99	68.116	ENSCAPG00000006281	-	96	68.841
ENSCAPG00000011521	HNRNPF	69	71.901	ENSCAPG00000013030	HNRNPH3	92	46.646
ENSCAPG00000011521	HNRNPF	99	72.024	ENSCAPG00000007470	-	96	71.229

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000011521	HNRNPF	99	97.826	ENSG00000169813	HNRNPF	99	97.826	Homo_sapiens
ENSCAPG00000011521	HNRNPF	99	98.068	ENSAMEG00000018983	HNRNPF	99	98.068	Ailuropoda_melanoleuca
ENSCAPG00000011521	HNRNPF	99	94.686	ENSANAG00000033285	-	99	94.686	Aotus_nancymaae
ENSCAPG00000011521	HNRNPF	88	82.114	ENSANAG00000033452	-	89	82.114	Aotus_nancymaae
ENSCAPG00000011521	HNRNPF	99	97.585	ENSBTAG00000008853	HNRNPF	99	97.585	Bos_taurus
ENSCAPG00000011521	HNRNPF	99	80.383	ENSBTAG00000020513	-	99	80.383	Bos_taurus
ENSCAPG00000011521	HNRNPF	99	97.826	ENSCJAG00000008291	HNRNPF	99	97.826	Callithrix_jacchus
ENSCAPG00000011521	HNRNPF	99	98.068	ENSCAFG00000007044	HNRNPF	99	98.068	Canis_familiaris
ENSCAPG00000011521	HNRNPF	99	97.585	ENSCHIG00000006714	HNRNPF	99	97.585	Capra_hircus
ENSCAPG00000011521	HNRNPF	97	73.039	ENSCHIG00000022971	-	99	73.039	Capra_hircus
ENSCAPG00000011521	HNRNPF	99	97.343	ENSTSYG00000030439	-	99	97.343	Carlito_syrichta
ENSCAPG00000011521	HNRNPF	100	82.933	ENSTSYG00000002112	-	100	82.933	Carlito_syrichta
ENSCAPG00000011521	HNRNPF	100	100.000	ENSCPOG00000003678	HNRNPF	100	100.000	Cavia_porcellus
ENSCAPG00000011521	HNRNPF	99	97.585	ENSCCAG00000031457	-	99	97.585	Cebus_capucinus
ENSCAPG00000011521	HNRNPF	99	78.261	ENSCCAG00000028687	-	99	78.261	Cebus_capucinus
ENSCAPG00000011521	HNRNPF	100	100.000	ENSCLAG00000005161	HNRNPF	100	100.000	Chinchilla_lanigera
ENSCAPG00000011521	HNRNPF	99	96.377	ENSCANG00000003086	-	99	96.377	Colobus_angolensis_palliatus
ENSCAPG00000011521	HNRNPF	94	74.293	ENSCGRG00001016206	-	88	74.293	Cricetulus_griseus_chok1gshd
ENSCAPG00000011521	HNRNPF	99	98.792	ENSCGRG00001016276	Hnrnpf	99	98.792	Cricetulus_griseus_chok1gshd
ENSCAPG00000011521	HNRNPF	99	93.961	ENSDNOG00000030849	-	99	93.961	Dasypus_novemcinctus
ENSCAPG00000011521	HNRNPF	99	94.686	ENSDORG00000024936	-	99	94.686	Dipodomys_ordii
ENSCAPG00000011521	HNRNPF	99	90.580	ENSDORG00000008260	-	99	90.580	Dipodomys_ordii
ENSCAPG00000011521	HNRNPF	99	88.889	ENSDORG00000005431	-	99	88.889	Dipodomys_ordii
ENSCAPG00000011521	HNRNPF	99	97.343	ENSDORG00000024298	-	99	97.343	Dipodomys_ordii
ENSCAPG00000011521	HNRNPF	99	98.309	ENSEASG00005006903	HNRNPF	99	98.309	Equus_asinus_asinus
ENSCAPG00000011521	HNRNPF	99	94.444	ENSECAG00000003229	HNRNPF	99	94.444	Equus_caballus
ENSCAPG00000011521	HNRNPF	99	98.068	ENSFCAG00000028219	-	99	98.068	Felis_catus
ENSCAPG00000011521	HNRNPF	99	90.585	ENSFDAG00000007858	-	98	90.585	Fukomys_damarensis
ENSCAPG00000011521	HNRNPF	100	100.000	ENSFDAG00000011431	-	100	100.000	Fukomys_damarensis
ENSCAPG00000011521	HNRNPF	100	81.928	ENSFDAG00000015308	-	99	81.928	Fukomys_damarensis
ENSCAPG00000011521	HNRNPF	90	97.594	ENSGGOG00000010867	HNRNPF	93	97.594	Gorilla_gorilla
ENSCAPG00000011521	HNRNPF	98	95.213	ENSHGLG00000014139	-	97	95.213	Heterocephalus_glaber_female
ENSCAPG00000011521	HNRNPF	99	95.411	ENSHGLG00000010276	-	99	95.411	Heterocephalus_glaber_female
ENSCAPG00000011521	HNRNPF	99	88.889	ENSHGLG00000017607	-	100	88.889	Heterocephalus_glaber_female
ENSCAPG00000011521	HNRNPF	100	99.759	ENSHGLG00000000147	-	100	99.759	Heterocephalus_glaber_female
ENSCAPG00000011521	HNRNPF	99	95.169	ENSHGLG00100019558	-	100	95.169	Heterocephalus_glaber_male
ENSCAPG00000011521	HNRNPF	99	98.762	ENSHGLG00100020825	-	100	98.762	Heterocephalus_glaber_male
ENSCAPG00000011521	HNRNPF	100	95.663	ENSHGLG00100019572	-	100	95.663	Heterocephalus_glaber_male
ENSCAPG00000011521	HNRNPF	91	88.032	ENSHGLG00100010905	-	97	88.032	Heterocephalus_glaber_male
ENSCAPG00000011521	HNRNPF	99	91.162	ENSHGLG00100019910	-	100	91.162	Heterocephalus_glaber_male
ENSCAPG00000011521	HNRNPF	100	83.933	ENSSTOG00000023820	-	100	83.933	Ictidomys_tridecemlineatus
ENSCAPG00000011521	HNRNPF	99	99.517	ENSSTOG00000025560	-	99	99.517	Ictidomys_tridecemlineatus
ENSCAPG00000011521	HNRNPF	99	88.675	ENSSTOG00000022853	-	99	88.675	Ictidomys_tridecemlineatus
ENSCAPG00000011521	HNRNPF	99	81.884	ENSJJAG00000022288	-	99	81.884	Jaculus_jaculus
ENSCAPG00000011521	HNRNPF	99	73.141	ENSJJAG00000000554	-	99	73.141	Jaculus_jaculus
ENSCAPG00000011521	HNRNPF	98	94.355	ENSJJAG00000014334	-	99	94.355	Jaculus_jaculus
ENSCAPG00000011521	HNRNPF	99	64.493	ENSJJAG00000014424	-	99	64.493	Jaculus_jaculus
ENSCAPG00000011521	HNRNPF	99	87.923	ENSJJAG00000017385	-	99	87.923	Jaculus_jaculus
ENSCAPG00000011521	HNRNPF	100	95.673	ENSLAFG00000000424	HNRNPF	100	95.673	Loxodonta_africana
ENSCAPG00000011521	HNRNPF	99	97.826	ENSMFAG00000021184	HNRNPF	99	97.826	Macaca_fascicularis
ENSCAPG00000011521	HNRNPF	99	97.826	ENSMMUG00000020982	HNRNPF	99	97.826	Macaca_mulatta
ENSCAPG00000011521	HNRNPF	99	97.826	ENSMLEG00000023515	HNRNPF	99	97.826	Mandrillus_leucophaeus
ENSCAPG00000011521	HNRNPF	99	98.792	ENSMAUG00000007892	Hnrnpf	99	98.792	Mesocricetus_auratus
ENSCAPG00000011521	HNRNPF	99	79.903	ENSMICG00000043739	-	99	79.903	Microcebus_murinus
ENSCAPG00000011521	HNRNPF	99	80.238	ENSMICG00000044171	-	99	80.238	Microcebus_murinus
ENSCAPG00000011521	HNRNPF	99	97.585	ENSMOCG00000014915	Hnrnpf	99	97.585	Microtus_ochrogaster
ENSCAPG00000011521	HNRNPF	99	98.792	ENSMUSG00000042079	Hnrnpf	99	98.792	Mus_musculus
ENSCAPG00000011521	HNRNPF	99	97.585	MGP_PahariEiJ_G0026903	-	99	97.585	Mus_pahari
ENSCAPG00000011521	HNRNPF	99	98.241	ENSMPUG00000017283	HNRNPF	98	98.241	Mustela_putorius_furo
ENSCAPG00000011521	HNRNPF	99	95.663	ENSMLUG00000007261	HNRNPF	99	95.663	Myotis_lucifugus
ENSCAPG00000011521	HNRNPF	99	80.193	ENSNGAG00000014079	-	99	80.193	Nannospalax_galili
ENSCAPG00000011521	HNRNPF	99	70.531	ENSNGAG00000009482	-	99	70.531	Nannospalax_galili
ENSCAPG00000011521	HNRNPF	99	98.309	ENSNGAG00000010409	-	99	98.309	Nannospalax_galili
ENSCAPG00000011521	HNRNPF	99	97.826	ENSNLEG00000019098	HNRNPF	99	97.826	Nomascus_leucogenys
ENSCAPG00000011521	HNRNPF	100	100.000	ENSODEG00000019266	-	100	100.000	Octodon_degus
ENSCAPG00000011521	HNRNPF	99	92.961	ENSODEG00000002359	-	99	92.961	Octodon_degus
ENSCAPG00000011521	HNRNPF	99	92.995	ENSOCUG00000024604	-	99	92.995	Oryctolagus_cuniculus
ENSCAPG00000011521	HNRNPF	99	98.551	ENSOCUG00000024719	-	99	98.551	Oryctolagus_cuniculus
ENSCAPG00000011521	HNRNPF	100	91.106	ENSOGAG00000013734	-	100	91.106	Otolemur_garnettii
ENSCAPG00000011521	HNRNPF	99	93.720	ENSOGAG00000030480	-	99	93.720	Otolemur_garnettii
ENSCAPG00000011521	HNRNPF	99	98.634	ENSOARG00000003995	HNRNPF	91	98.634	Ovis_aries
ENSCAPG00000011521	HNRNPF	99	80.193	ENSOARG00000016658	-	99	80.193	Ovis_aries
ENSCAPG00000011521	HNRNPF	99	98.068	ENSPPRG00000021222	HNRNPF	99	98.068	Panthera_pardus
ENSCAPG00000011521	HNRNPF	99	98.068	ENSPTIG00000009644	HNRNPF	99	98.068	Panthera_tigris_altaica
ENSCAPG00000011521	HNRNPF	99	97.826	ENSPTRG00000002446	HNRNPF	99	97.826	Pan_troglodytes
ENSCAPG00000011521	HNRNPF	99	97.585	ENSPANG00000002212	HNRNPF	99	97.585	Papio_anubis
ENSCAPG00000011521	HNRNPF	99	97.826	ENSPPYG00000002212	HNRNPF	99	97.826	Pongo_abelii
ENSCAPG00000011521	HNRNPF	99	95.422	ENSPCAG00000013169	HNRNPF	99	95.422	Procavia_capensis
ENSCAPG00000011521	HNRNPF	99	96.860	ENSPVAG00000011646	HNRNPF	99	96.860	Pteropus_vampyrus
ENSCAPG00000011521	HNRNPF	99	98.792	ENSRNOG00000014562	Hnrnpf	99	98.792	Rattus_norvegicus
ENSCAPG00000011521	HNRNPF	99	97.826	ENSRROG00000001235	HNRNPF	99	97.826	Rhinopithecus_roxellana
ENSCAPG00000011521	HNRNPF	99	97.826	ENSSBOG00000018361	HNRNPF	99	97.826	Saimiri_boliviensis_boliviensis
ENSCAPG00000011521	HNRNPF	99	97.826	ENSSARG00000010059	HNRNPF	99	97.826	Sorex_araneus
ENSCAPG00000011521	HNRNPF	99	98.148	ENSSSCG00000010203	-	99	98.148	Sus_scrofa
ENSCAPG00000011521	HNRNPF	99	58.072	ENSSSCG00000024956	-	96	58.072	Sus_scrofa
ENSCAPG00000011521	HNRNPF	97	71.287	ENSTBEG00000016094	HNRNPF	99	71.287	Tupaia_belangeri
ENSCAPG00000011521	HNRNPF	99	98.068	ENSUAMG00000000455	HNRNPF	99	98.068	Ursus_americanus
ENSCAPG00000011521	HNRNPF	99	98.068	ENSUMAG00000016485	HNRNPF	99	98.068	Ursus_maritimus
ENSCAPG00000011521	HNRNPF	99	98.068	ENSVVUG00000021261	HNRNPF	99	98.068	Vulpes_vulpes