EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000011523 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Minus strand
Length: 425 bases
Position: chrAVPZ01000667.1:28371758-28372182
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000010219	Sas10_Utp3	PF04000.15	1.4e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000013944	-	363	-	ENSCAPP00000010219	120 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000011523's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000011523's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000011523	-	100	72.340	ENSG00000197223	C1D	100	72.340	Homo_sapiens
ENSCAPG00000011523	-	94	61.062	ENSAPOG00000005466	c1d	76	61.062	Acanthochromis_polyacanthus
ENSCAPG00000011523	-	94	85.841	ENSAMEG00000004859	C1D	77	85.841	Ailuropoda_melanoleuca
ENSCAPG00000011523	-	94	61.947	ENSACIG00000012684	c1d	73	61.947	Amphilophus_citrinellus
ENSCAPG00000011523	-	91	60.550	ENSAOCG00000020354	c1d	74	60.550	Amphiprion_ocellaris
ENSCAPG00000011523	-	91	61.468	ENSAPEG00000001403	c1d	71	61.468	Amphiprion_percula
ENSCAPG00000011523	-	94	60.177	ENSATEG00000012922	c1d	73	60.177	Anabas_testudineus
ENSCAPG00000011523	-	88	70.755	ENSAPLG00000009320	C1D	73	70.755	Anas_platyrhynchos
ENSCAPG00000011523	-	78	72.043	ENSACAG00000001337	C1D	87	71.698	Anolis_carolinensis
ENSCAPG00000011523	-	100	71.631	ENSANAG00000035972	-	100	71.631	Aotus_nancymaae
ENSCAPG00000011523	-	100	70.213	ENSANAG00000005773	-	100	70.213	Aotus_nancymaae
ENSCAPG00000011523	-	93	59.821	ENSACLG00000026206	c1d	75	59.821	Astatotilapia_calliptera
ENSCAPG00000011523	-	94	60.177	ENSAMXG00000043212	c1d	77	60.177	Astyanax_mexicanus
ENSCAPG00000011523	-	100	73.050	ENSBTAG00000049002	C1D	100	73.050	Bos_taurus
ENSCAPG00000011523	-	93	80.357	ENSCJAG00000044668	-	87	80.357	Callithrix_jacchus
ENSCAPG00000011523	-	94	84.956	ENSCJAG00000006589	C1D	74	84.956	Callithrix_jacchus
ENSCAPG00000011523	-	100	73.050	ENSCAFG00000030099	C1D	100	73.050	Canis_familiaris
ENSCAPG00000011523	-	100	73.050	ENSCAFG00020026997	C1D	100	73.050	Canis_lupus_dingo
ENSCAPG00000011523	-	100	73.050	ENSCHIG00000025729	C1D	100	73.050	Capra_hircus
ENSCAPG00000011523	-	99	75.188	ENSTSYG00000026573	-	85	75.188	Carlito_syrichta
ENSCAPG00000011523	-	100	73.759	ENSTSYG00000035739	-	100	73.759	Carlito_syrichta
ENSCAPG00000011523	-	99	72.857	ENSCPOG00000037986	-	99	72.857	Cavia_porcellus
ENSCAPG00000011523	-	100	98.333	ENSCPOG00000020112	-	100	98.333	Cavia_porcellus
ENSCAPG00000011523	-	100	72.340	ENSCCAG00000030405	-	100	72.340	Cebus_capucinus
ENSCAPG00000011523	-	100	69.504	ENSCATG00000043348	-	100	69.504	Cercocebus_atys
ENSCAPG00000011523	-	100	72.340	ENSCATG00000045336	C1D	100	72.340	Cercocebus_atys
ENSCAPG00000011523	-	100	73.050	ENSCLAG00000011883	C1D	100	73.050	Chinchilla_lanigera
ENSCAPG00000011523	-	94	84.956	ENSCSAG00000014811	C1D	80	84.956	Chlorocebus_sabaeus
ENSCAPG00000011523	-	100	73.050	ENSCHOG00000006719	C1D	79	73.050	Choloepus_hoffmanni
ENSCAPG00000011523	-	94	71.053	ENSCPBG00000014451	C1D	77	71.053	Chrysemys_picta_bellii
ENSCAPG00000011523	-	90	37.963	ENSCING00000020906	-	57	37.963	Ciona_intestinalis
ENSCAPG00000011523	-	88	42.453	ENSCSAVG00000000150	-	61	42.453	Ciona_savignyi
ENSCAPG00000011523	-	100	71.631	ENSCANG00000035564	C1D	100	71.631	Colobus_angolensis_palliatus
ENSCAPG00000011523	-	89	80.374	ENSCANG00000036599	-	87	80.374	Colobus_angolensis_palliatus
ENSCAPG00000011523	-	100	69.504	ENSCGRG00001023376	C1d	100	69.504	Cricetulus_griseus_chok1gshd
ENSCAPG00000011523	-	100	69.504	ENSCGRG00000010245	C1d	100	69.504	Cricetulus_griseus_crigri
ENSCAPG00000011523	-	94	56.637	ENSCSEG00000000587	c1d	79	56.637	Cynoglossus_semilaevis
ENSCAPG00000011523	-	94	57.522	ENSCVAG00000004603	c1d	72	59.259	Cyprinodon_variegatus
ENSCAPG00000011523	-	94	58.407	ENSDARG00000021112	c1d	76	58.407	Danio_rerio
ENSCAPG00000011523	-	100	68.085	ENSDNOG00000046068	-	100	68.085	Dasypus_novemcinctus
ENSCAPG00000011523	-	100	70.922	ENSDORG00000003300	C1d	100	70.922	Dipodomys_ordii
ENSCAPG00000011523	-	56	83.582	ENSETEG00000014857	C1D	71	83.582	Echinops_telfairi
ENSCAPG00000011523	-	81	47.423	ENSEBUG00000006874	c1d	70	47.321	Eptatretus_burgeri
ENSCAPG00000011523	-	100	73.759	ENSEASG00005007307	C1D	92	73.759	Equus_asinus_asinus
ENSCAPG00000011523	-	100	82.500	ENSECAG00000002187	C1D	86	82.500	Equus_caballus
ENSCAPG00000011523	-	94	60.177	ENSELUG00000014823	c1d	77	60.177	Esox_lucius
ENSCAPG00000011523	-	100	73.759	ENSFCAG00000028933	C1D	100	73.759	Felis_catus
ENSCAPG00000011523	-	98	69.492	ENSFALG00000013640	C1D	72	69.492	Ficedula_albicollis
ENSCAPG00000011523	-	100	73.759	ENSFDAG00000010462	-	100	73.759	Fukomys_damarensis
ENSCAPG00000011523	-	100	56.338	ENSFDAG00000014175	-	100	56.338	Fukomys_damarensis
ENSCAPG00000011523	-	94	61.062	ENSFHEG00000010545	c1d	78	61.062	Fundulus_heteroclitus
ENSCAPG00000011523	-	89	57.944	ENSGMOG00000013911	-	85	57.944	Gadus_morhua
ENSCAPG00000011523	-	94	69.912	ENSGALG00000008765	C1D	78	69.912	Gallus_gallus
ENSCAPG00000011523	-	89	61.682	ENSGAFG00000012578	c1d	69	61.682	Gambusia_affinis
ENSCAPG00000011523	-	94	58.407	ENSGACG00000011981	c1d	88	58.407	Gasterosteus_aculeatus
ENSCAPG00000011523	-	94	69.298	ENSGAGG00000013383	C1D	77	69.298	Gopherus_agassizii
ENSCAPG00000011523	-	94	77.876	ENSGGOG00000025808	-	64	77.876	Gorilla_gorilla
ENSCAPG00000011523	-	100	70.922	ENSGGOG00000022296	-	100	70.922	Gorilla_gorilla
ENSCAPG00000011523	-	100	73.050	ENSGGOG00000025982	-	78	73.050	Gorilla_gorilla
ENSCAPG00000011523	-	88	60.377	ENSHBUG00000018531	c1d	64	59.813	Haplochromis_burtoni
ENSCAPG00000011523	-	92	76.364	ENSHGLG00000021219	-	78	76.364	Heterocephalus_glaber_female
ENSCAPG00000011523	-	100	80.833	ENSHGLG00000012332	-	80	84.071	Heterocephalus_glaber_female
ENSCAPG00000011523	-	94	82.301	ENSHGLG00100000221	-	80	82.301	Heterocephalus_glaber_male
ENSCAPG00000011523	-	92	77.273	ENSHGLG00100019951	-	78	77.273	Heterocephalus_glaber_male
ENSCAPG00000011523	-	95	57.018	ENSHCOG00000014568	C1D	74	58.716	Hippocampus_comes
ENSCAPG00000011523	-	95	57.018	ENSHCOG00000014589	c1d	74	58.716	Hippocampus_comes
ENSCAPG00000011523	-	94	57.522	ENSIPUG00000018661	c1d	78	57.522	Ictalurus_punctatus
ENSCAPG00000011523	-	100	73.050	ENSSTOG00000012346	C1D	100	73.050	Ictidomys_tridecemlineatus
ENSCAPG00000011523	-	94	77.876	ENSJJAG00000023186	-	86	77.876	Jaculus_jaculus
ENSCAPG00000011523	-	94	75.221	ENSJJAG00000009540	-	82	75.221	Jaculus_jaculus
ENSCAPG00000011523	-	100	64.167	ENSJJAG00000016086	-	85	64.167	Jaculus_jaculus
ENSCAPG00000011523	-	100	68.333	ENSJJAG00000005044	-	87	68.333	Jaculus_jaculus
ENSCAPG00000011523	-	94	61.062	ENSKMAG00000015077	c1d	73	61.062	Kryptolebias_marmoratus
ENSCAPG00000011523	-	94	58.407	ENSLBEG00000008351	c1d	73	58.407	Labrus_bergylta
ENSCAPG00000011523	-	84	65.686	ENSLACG00000007516	C1D	77	66.667	Latimeria_chalumnae
ENSCAPG00000011523	-	94	62.281	ENSLOCG00000016024	c1d	78	62.281	Lepisosteus_oculatus
ENSCAPG00000011523	-	100	72.340	ENSLAFG00000002083	C1D	100	72.340	Loxodonta_africana
ENSCAPG00000011523	-	100	72.340	ENSMFAG00000034261	C1D	100	72.340	Macaca_fascicularis
ENSCAPG00000011523	-	100	69.504	ENSMFAG00000034034	-	100	69.504	Macaca_fascicularis
ENSCAPG00000011523	-	100	70.922	ENSMFAG00000028681	-	100	70.922	Macaca_fascicularis
ENSCAPG00000011523	-	100	68.794	ENSMMUG00000043184	-	100	68.794	Macaca_mulatta
ENSCAPG00000011523	-	100	70.922	ENSMMUG00000017209	-	100	70.922	Macaca_mulatta
ENSCAPG00000011523	-	100	81.667	ENSMMUG00000041557	C1D	86	81.667	Macaca_mulatta
ENSCAPG00000011523	-	100	68.794	ENSMNEG00000020626	-	100	68.794	Macaca_nemestrina
ENSCAPG00000011523	-	100	72.340	ENSMNEG00000040612	C1D	100	72.340	Macaca_nemestrina
ENSCAPG00000011523	-	100	72.340	ENSMLEG00000027619	C1D	100	72.340	Mandrillus_leucophaeus
ENSCAPG00000011523	-	100	69.504	ENSMLEG00000028412	-	100	69.504	Mandrillus_leucophaeus
ENSCAPG00000011523	-	94	61.062	ENSMAMG00000022156	c1d	73	61.062	Mastacembelus_armatus
ENSCAPG00000011523	-	88	60.377	ENSMZEG00005027343	c1d	73	60.377	Maylandia_zebra
ENSCAPG00000011523	-	94	70.796	ENSMGAG00000004517	C1D	80	70.796	Meleagris_gallopavo
ENSCAPG00000011523	-	94	81.416	ENSMAUG00000008974	C1d	80	81.416	Mesocricetus_auratus
ENSCAPG00000011523	-	100	73.050	ENSMICG00000032141	C1D	100	73.050	Microcebus_murinus
ENSCAPG00000011523	-	100	69.504	ENSMOCG00000010860	C1d	100	69.504	Microtus_ochrogaster
ENSCAPG00000011523	-	94	60.177	ENSMMOG00000007332	c1d	73	60.177	Mola_mola
ENSCAPG00000011523	-	94	73.684	ENSMODG00000003561	C1D	80	73.684	Monodelphis_domestica
ENSCAPG00000011523	-	94	60.177	ENSMALG00000020864	c1d	87	60.177	Monopterus_albus
ENSCAPG00000011523	-	94	79.646	MGP_CAROLIEiJ_G0016110	C1d	96	79.646	Mus_caroli
ENSCAPG00000011523	-	94	79.646	ENSMUSG00000000581	C1d	96	79.646	Mus_musculus
ENSCAPG00000011523	-	100	77.500	MGP_PahariEiJ_G0016781	C1d	96	80.531	Mus_pahari
ENSCAPG00000011523	-	94	79.646	MGP_SPRETEiJ_G0016952	C1d	96	79.646	Mus_spretus
ENSCAPG00000011523	-	100	73.050	ENSMPUG00000006224	C1D	100	73.050	Mustela_putorius_furo
ENSCAPG00000011523	-	94	78.761	ENSMLUG00000024947	-	80	78.761	Myotis_lucifugus
ENSCAPG00000011523	-	84	82.178	ENSMLUG00000010791	-	80	81.416	Myotis_lucifugus
ENSCAPG00000011523	-	100	75.833	ENSMLUG00000029990	-	85	75.833	Myotis_lucifugus
ENSCAPG00000011523	-	100	72.500	ENSNGAG00000016675	-	85	72.500	Nannospalax_galili
ENSCAPG00000011523	-	88	72.381	ENSNGAG00000012482	-	83	72.381	Nannospalax_galili
ENSCAPG00000011523	-	100	68.085	ENSNGAG00000011872	-	100	68.085	Nannospalax_galili
ENSCAPG00000011523	-	88	59.434	ENSNBRG00000010704	c1d	73	59.434	Neolamprologus_brichardi
ENSCAPG00000011523	-	94	84.071	ENSNLEG00000032919	-	63	84.071	Nomascus_leucogenys
ENSCAPG00000011523	-	94	84.071	ENSOPRG00000009586	C1D	80	84.071	Ochotona_princeps
ENSCAPG00000011523	-	100	75.000	ENSODEG00000018525	-	85	75.000	Octodon_degus
ENSCAPG00000011523	-	100	81.667	ENSODEG00000018885	-	86	81.667	Octodon_degus
ENSCAPG00000011523	-	100	82.500	ENSODEG00000011242	-	85	82.500	Octodon_degus
ENSCAPG00000011523	-	94	60.177	ENSONIG00000001233	c1d	75	60.177	Oreochromis_niloticus
ENSCAPG00000011523	-	69	81.928	ENSOANG00000008385	C1D	75	81.928	Ornithorhynchus_anatinus
ENSCAPG00000011523	-	94	82.301	ENSOCUG00000009771	-	80	82.301	Oryctolagus_cuniculus
ENSCAPG00000011523	-	94	82.301	ENSOCUG00000025587	-	80	82.301	Oryctolagus_cuniculus
ENSCAPG00000011523	-	88	63.208	ENSORLG00000021968	c1d	68	63.208	Oryzias_latipes
ENSCAPG00000011523	-	88	63.208	ENSORLG00020000507	c1d	69	63.208	Oryzias_latipes_hni
ENSCAPG00000011523	-	88	63.208	ENSORLG00015004594	c1d	68	63.208	Oryzias_latipes_hsok
ENSCAPG00000011523	-	94	62.832	ENSOMEG00000004672	c1d	72	62.832	Oryzias_melastigma
ENSCAPG00000011523	-	100	71.631	ENSOGAG00000027934	-	100	71.631	Otolemur_garnettii
ENSCAPG00000011523	-	100	73.050	ENSOARG00000019931	C1D	99	73.050	Ovis_aries
ENSCAPG00000011523	-	100	72.340	ENSPPAG00000037847	-	100	72.340	Pan_paniscus
ENSCAPG00000011523	-	94	77.876	ENSPPAG00000040091	-	64	77.876	Pan_paniscus
ENSCAPG00000011523	-	100	73.050	ENSPPRG00000017045	-	100	73.050	Panthera_pardus
ENSCAPG00000011523	-	100	46.099	ENSPPRG00000022830	-	100	46.099	Panthera_pardus
ENSCAPG00000011523	-	100	73.759	ENSPTIG00000009414	C1D	100	73.759	Panthera_tigris_altaica
ENSCAPG00000011523	-	100	72.340	ENSPTRG00000023558	C1D	100	72.340	Pan_troglodytes
ENSCAPG00000011523	-	100	68.794	ENSPANG00000000501	-	100	68.794	Papio_anubis
ENSCAPG00000011523	-	100	72.340	ENSPANG00000002886	C1D	78	72.340	Papio_anubis
ENSCAPG00000011523	-	94	57.895	ENSPKIG00000004877	c1d	77	57.895	Paramormyrops_kingsleyae
ENSCAPG00000011523	-	88	76.415	ENSPSIG00000010015	C1D	73	76.415	Pelodiscus_sinensis
ENSCAPG00000011523	-	94	57.522	ENSPMGG00000009326	c1d	73	57.522	Periophthalmus_magnuspinnatus
ENSCAPG00000011523	-	94	75.439	ENSPCIG00000018629	-	80	75.439	Phascolarctos_cinereus
ENSCAPG00000011523	-	94	69.912	ENSPCIG00000006831	-	78	69.912	Phascolarctos_cinereus
ENSCAPG00000011523	-	94	61.947	ENSPFOG00000003686	c1d	73	61.947	Poecilia_formosa
ENSCAPG00000011523	-	94	61.947	ENSPLAG00000000228	c1d	80	61.947	Poecilia_latipinna
ENSCAPG00000011523	-	94	61.947	ENSPMEG00000023213	c1d	73	61.947	Poecilia_mexicana
ENSCAPG00000011523	-	94	62.832	ENSPREG00000000742	c1d	80	62.832	Poecilia_reticulata
ENSCAPG00000011523	-	100	72.340	ENSPPYG00000012354	C1D	77	72.340	Pongo_abelii
ENSCAPG00000011523	-	94	77.876	ENSPPYG00000002294	-	80	77.876	Pongo_abelii
ENSCAPG00000011523	-	100	64.539	ENSPCAG00000010088	C1D	79	64.539	Procavia_capensis
ENSCAPG00000011523	-	100	73.050	ENSPCOG00000016112	C1D	100	73.050	Propithecus_coquereli
ENSCAPG00000011523	-	100	73.050	ENSPVAG00000012692	C1D	79	73.050	Pteropus_vampyrus
ENSCAPG00000011523	-	94	57.391	ENSPNYG00000008789	c1d	76	57.391	Pundamilia_nyererei
ENSCAPG00000011523	-	94	62.832	ENSPNAG00000004219	c1d	77	62.832	Pygocentrus_nattereri
ENSCAPG00000011523	-	100	68.085	ENSRNOG00000005982	C1d	100	68.085	Rattus_norvegicus
ENSCAPG00000011523	-	94	80.531	ENSRBIG00000026211	-	80	80.531	Rhinopithecus_bieti
ENSCAPG00000011523	-	100	72.340	ENSRROG00000029013	C1D	100	72.340	Rhinopithecus_roxellana
ENSCAPG00000011523	-	94	81.416	ENSRROG00000005944	-	80	81.416	Rhinopithecus_roxellana
ENSCAPG00000011523	-	100	72.340	ENSSBOG00000025275	C1D	100	72.340	Saimiri_boliviensis_boliviensis
ENSCAPG00000011523	-	94	75.439	ENSSHAG00000008352	C1D	55	75.439	Sarcophilus_harrisii
ENSCAPG00000011523	-	94	62.281	ENSSFOG00015010861	c1d	81	62.281	Scleropages_formosus
ENSCAPG00000011523	-	89	59.813	ENSSMAG00000019230	c1d	69	59.813	Scophthalmus_maximus
ENSCAPG00000011523	-	94	61.947	ENSSDUG00000020213	c1d	73	61.947	Seriola_dumerili
ENSCAPG00000011523	-	94	61.947	ENSSLDG00000017371	c1d	73	61.947	Seriola_lalandi_dorsalis
ENSCAPG00000011523	-	94	69.298	ENSSPUG00000006525	C1D	78	69.298	Sphenodon_punctatus
ENSCAPG00000011523	-	94	63.717	ENSSPAG00000008574	c1d	73	63.717	Stegastes_partitus
ENSCAPG00000011523	-	100	73.759	ENSSSCG00000039331	-	100	73.759	Sus_scrofa
ENSCAPG00000011523	-	100	70.833	ENSSSCG00000035701	-	100	70.833	Sus_scrofa
ENSCAPG00000011523	-	93	71.171	ENSTGUG00000002367	C1D	77	71.171	Taeniopygia_guttata
ENSCAPG00000011523	-	88	59.434	ENSTRUG00000012245	c1d	64	59.434	Takifugu_rubripes
ENSCAPG00000011523	-	94	58.407	ENSTNIG00000009827	c1d	76	58.407	Tetraodon_nigroviridis
ENSCAPG00000011523	-	94	85.841	ENSTBEG00000009797	C1D	80	85.841	Tupaia_belangeri
ENSCAPG00000011523	-	94	85.841	ENSTTRG00000013982	C1D	65	85.841	Tursiops_truncatus
ENSCAPG00000011523	-	100	62.500	ENSUAMG00000025246	C1D	100	62.500	Ursus_americanus
ENSCAPG00000011523	-	100	73.759	ENSUMAG00000021118	-	100	73.759	Ursus_maritimus
ENSCAPG00000011523	-	84	64.423	ENSUMAG00000006451	-	93	63.793	Ursus_maritimus
ENSCAPG00000011523	-	100	71.631	ENSVPAG00000012080	C1D	79	71.631	Vicugna_pacos
ENSCAPG00000011523	-	100	72.340	ENSVVUG00000027629	C1D	88	72.340	Vulpes_vulpes
ENSCAPG00000011523	-	94	66.667	ENSXETG00000025934	c1d	79	66.667	Xenopus_tropicalis
ENSCAPG00000011523	-	94	61.062	ENSXCOG00000013813	c1d	73	61.062	Xiphophorus_couchianus
ENSCAPG00000011523	-	94	61.062	ENSXMAG00000022273	c1d	73	61.062	Xiphophorus_maculatus