EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000011563 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 88571 bases
Position: chrAVPZ01000389.1:874073-962643
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000010304	TUDOR	PF00567.24	4.8e-17	1	1
ENSCAPP00000010308	TUDOR	PF00567.24	5e-17	1	1
ENSCAPP00000010299	TUDOR	PF00567.24	5.3e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000014033	-	2010	-	ENSCAPP00000010304	670 (aa)	-	-
ENSCAPT00000014037	-	1956	-	ENSCAPP00000010308	652 (aa)	-	-
ENSCAPT00000014027	-	2025	-	ENSCAPP00000010299	675 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000011563's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000011563's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000011563	-	95	70.149	ENSG00000196335	STK31	81	82.456	Homo_sapiens
ENSCAPG00000011563	-	95	75.188	ENSAMEG00000009006	STK31	72	75.188	Ailuropoda_melanoleuca
ENSCAPG00000011563	-	88	57.252	ENSAPLG00000014105	STK31	67	57.252	Anas_platyrhynchos
ENSCAPG00000011563	-	86	53.147	ENSACAG00000013399	STK31	64	53.147	Anolis_carolinensis
ENSCAPG00000011563	-	94	74.046	ENSANAG00000029927	STK31	73	74.046	Aotus_nancymaae
ENSCAPG00000011563	-	84	42.748	ENSAMXG00000000509	stk31	64	42.748	Astyanax_mexicanus
ENSCAPG00000011563	-	95	75.573	ENSBTAG00000010609	STK31	71	75.573	Bos_taurus
ENSCAPG00000011563	-	91	74.436	ENSCJAG00000007625	STK31	67	74.436	Callithrix_jacchus
ENSCAPG00000011563	-	95	75.940	ENSCAFG00000002795	STK31	71	75.940	Canis_familiaris
ENSCAPG00000011563	-	92	93.258	ENSCAFG00020002807	STK31	70	93.258	Canis_lupus_dingo
ENSCAPG00000011563	-	95	76.336	ENSCHIG00000018707	STK31	79	76.336	Capra_hircus
ENSCAPG00000011563	-	92	71.429	ENSTSYG00000005000	STK31	73	71.429	Carlito_syrichta
ENSCAPG00000011563	-	94	97.500	ENSCPOG00000032654	STK31	75	97.500	Cavia_porcellus
ENSCAPG00000011563	-	95	72.932	ENSCCAG00000027635	STK31	74	72.932	Cebus_capucinus
ENSCAPG00000011563	-	95	72.388	ENSCATG00000021541	STK31	71	72.388	Cercocebus_atys
ENSCAPG00000011563	-	95	91.892	ENSCLAG00000006727	STK31	70	91.892	Chinchilla_lanigera
ENSCAPG00000011563	-	74	88.889	ENSCHOG00000001647	STK31	59	85.437	Choloepus_hoffmanni
ENSCAPG00000011563	-	84	60.769	ENSCPBG00000022469	STK31	62	60.769	Chrysemys_picta_bellii
ENSCAPG00000011563	-	88	83.051	ENSCANG00000031972	-	66	83.051	Colobus_angolensis_palliatus
ENSCAPG00000011563	-	95	73.684	ENSCGRG00001021953	Stk31	77	73.684	Cricetulus_griseus_chok1gshd
ENSCAPG00000011563	-	91	76.336	ENSDORG00000016315	Stk31	71	76.336	Dipodomys_ordii
ENSCAPG00000011563	-	96	65.000	ENSETEG00000000255	STK31	80	60.690	Echinops_telfairi
ENSCAPG00000011563	-	95	75.940	ENSEASG00005022020	STK31	73	75.940	Equus_asinus_asinus
ENSCAPG00000011563	-	95	75.940	ENSECAG00000021842	STK31	73	75.940	Equus_caballus
ENSCAPG00000011563	-	83	43.411	ENSELUG00000003021	stk31	76	46.667	Esox_lucius
ENSCAPG00000011563	-	95	75.940	ENSFCAG00000028451	STK31	71	75.940	Felis_catus
ENSCAPG00000011563	-	95	90.000	ENSFDAG00000010732	-	71	90.000	Fukomys_damarensis
ENSCAPG00000011563	-	91	55.556	ENSGALG00000010980	STK31	67	55.556	Gallus_gallus
ENSCAPG00000011563	-	85	60.150	ENSGAGG00000005814	STK31	64	60.150	Gopherus_agassizii
ENSCAPG00000011563	-	99	66.847	ENSGGOG00000034995	-	86	66.847	Gorilla_gorilla
ENSCAPG00000011563	-	95	85.000	ENSHGLG00000008474	STK31	70	85.000	Heterocephalus_glaber_female
ENSCAPG00000011563	-	95	85.000	ENSHGLG00100002852	STK31	72	85.000	Heterocephalus_glaber_male
ENSCAPG00000011563	-	84	40.458	ENSIPUG00000011257	stk31	65	39.850	Ictalurus_punctatus
ENSCAPG00000011563	-	95	76.692	ENSSTOG00000003577	STK31	71	76.692	Ictidomys_tridecemlineatus
ENSCAPG00000011563	-	95	75.188	ENSJJAG00000010464	Stk31	73	75.188	Jaculus_jaculus
ENSCAPG00000011563	-	82	56.923	ENSLACG00000015416	STK31	66	56.923	Latimeria_chalumnae
ENSCAPG00000011563	-	85	43.846	ENSLOCG00000011643	stk31	65	43.846	Lepisosteus_oculatus
ENSCAPG00000011563	-	95	74.436	ENSLAFG00000009258	STK31	71	74.436	Loxodonta_africana
ENSCAPG00000011563	-	95	72.388	ENSMFAG00000002623	STK31	71	72.388	Macaca_fascicularis
ENSCAPG00000011563	-	95	72.388	ENSMMUG00000023196	STK31	71	72.388	Macaca_mulatta
ENSCAPG00000011563	-	95	72.388	ENSMNEG00000030763	STK31	71	72.388	Macaca_nemestrina
ENSCAPG00000011563	-	95	72.388	ENSMLEG00000038978	STK31	71	72.388	Mandrillus_leucophaeus
ENSCAPG00000011563	-	86	55.556	ENSMGAG00000010548	STK31	63	55.556	Meleagris_gallopavo
ENSCAPG00000011563	-	95	77.444	ENSMICG00000012021	STK31	71	77.444	Microcebus_murinus
ENSCAPG00000011563	-	94	72.932	ENSMOCG00000005284	Stk31	77	72.932	Microtus_ochrogaster
ENSCAPG00000011563	-	95	69.173	ENSMODG00000000777	STK31	72	69.173	Monodelphis_domestica
ENSCAPG00000011563	-	95	73.684	MGP_CAROLIEiJ_G0028368	-	78	73.684	Mus_caroli
ENSCAPG00000011563	-	95	75.000	ENSMUSG00000023403	Stk31	79	73.684	Mus_musculus
ENSCAPG00000011563	-	95	73.684	MGP_PahariEiJ_G0022118	Stk31	79	73.684	Mus_pahari
ENSCAPG00000011563	-	95	75.000	MGP_SPRETEiJ_G0029371	Stk31	79	73.684	Mus_spretus
ENSCAPG00000011563	-	91	75.940	ENSMPUG00000013470	STK31	71	75.940	Mustela_putorius_furo
ENSCAPG00000011563	-	95	75.000	ENSMLUG00000010598	STK31	71	75.000	Myotis_lucifugus
ENSCAPG00000011563	-	95	75.188	ENSNGAG00000024195	Stk31	78	75.188	Nannospalax_galili
ENSCAPG00000011563	-	95	70.149	ENSNLEG00000014801	STK31	73	70.149	Nomascus_leucogenys
ENSCAPG00000011563	-	79	64.394	ENSMEUG00000008208	-	65	64.394	Notamacropus_eugenii
ENSCAPG00000011563	-	69	92.135	ENSOPRG00000005685	-	52	92.135	Ochotona_princeps
ENSCAPG00000011563	-	95	85.000	ENSODEG00000008172	STK31	71	85.000	Octodon_degus
ENSCAPG00000011563	-	95	75.188	ENSOCUG00000004738	STK31	73	75.188	Oryctolagus_cuniculus
ENSCAPG00000011563	-	95	76.692	ENSOGAG00000013559	STK31	71	76.692	Otolemur_garnettii
ENSCAPG00000011563	-	95	76.336	ENSOARG00000011063	STK31	71	76.336	Ovis_aries
ENSCAPG00000011563	-	95	70.149	ENSPPAG00000041589	STK31	75	70.149	Pan_paniscus
ENSCAPG00000011563	-	95	75.940	ENSPPRG00000012594	STK31	71	75.940	Panthera_pardus
ENSCAPG00000011563	-	95	75.940	ENSPTIG00000016641	STK31	71	75.940	Panthera_tigris_altaica
ENSCAPG00000011563	-	95	70.149	ENSPTRG00000018991	STK31	71	70.149	Pan_troglodytes
ENSCAPG00000011563	-	95	70.149	ENSPTRG00000047172	-	71	70.149	Pan_troglodytes
ENSCAPG00000011563	-	95	72.388	ENSPANG00000024764	STK31	72	72.388	Papio_anubis
ENSCAPG00000011563	-	85	43.182	ENSPKIG00000009950	stk31	66	43.182	Paramormyrops_kingsleyae
ENSCAPG00000011563	-	89	60.150	ENSPSIG00000015607	STK31	69	60.150	Pelodiscus_sinensis
ENSCAPG00000011563	-	84	74.809	ENSPEMG00000020643	Stk31	70	74.809	Peromyscus_maniculatus_bairdii
ENSCAPG00000011563	-	89	69.925	ENSPCIG00000007874	STK31	79	69.925	Phascolarctos_cinereus
ENSCAPG00000011563	-	95	70.149	ENSPPYG00000017724	STK31	71	70.149	Pongo_abelii
ENSCAPG00000011563	-	95	75.000	ENSRNOG00000057554	Stk31	71	75.000	Rattus_norvegicus
ENSCAPG00000011563	-	95	67.459	ENSRBIG00000029403	STK31	71	67.459	Rhinopithecus_bieti
ENSCAPG00000011563	-	79	90.000	ENSRROG00000032379	STK31	70	90.000	Rhinopithecus_roxellana
ENSCAPG00000011563	-	95	72.180	ENSSBOG00000033536	STK31	73	72.180	Saimiri_boliviensis_boliviensis
ENSCAPG00000011563	-	95	69.173	ENSSHAG00000000643	STK31	72	69.173	Sarcophilus_harrisii
ENSCAPG00000011563	-	86	44.961	ENSSFOG00015021341	stk31	67	44.961	Scleropages_formosus
ENSCAPG00000011563	-	86	77.500	ENSSARG00000002814	STK31	64	77.500	Sorex_araneus
ENSCAPG00000011563	-	93	75.940	ENSSSCG00000016719	STK31	73	75.940	Sus_scrofa
ENSCAPG00000011563	-	76	87.755	ENSTBEG00000011483	STK31	56	87.755	Tupaia_belangeri
ENSCAPG00000011563	-	93	75.495	ENSTTRG00000000112	STK31	73	71.429	Tursiops_truncatus
ENSCAPG00000011563	-	95	77.863	ENSUMAG00000001224	STK31	71	77.863	Ursus_maritimus
ENSCAPG00000011563	-	95	75.000	ENSVPAG00000005178	STK31	71	75.000	Vicugna_pacos
ENSCAPG00000011563	-	95	75.940	ENSVVUG00000000857	STK31	72	75.940	Vulpes_vulpes
ENSCAPG00000011563	-	81	47.692	ENSXETG00000007400	stk31	67	47.692	Xenopus_tropicalis