EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAPG00000011604 (Gene tree)
Gene ID: -
Gene Symbol: CHD9
Alias: BC022889|FLJ12178|KIAA0308
Full Name: chromodomain helicase DNA binding protein 9
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 144473 bases
Position: chrAVPZ01000556.1:11233766-11378238
Accession: 25701
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000010390	BRK	PF07533.16	5.4e-19	1	1
ENSCAPP00000010412	BRK	PF07533.16	5.4e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000014145	CHD9-202	7254	-	ENSCAPP00000010412	2417 (aa)	-	-
ENSCAPT00000014122	CHD9-201	7275	-	ENSCAPP00000010390	2424 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000011604's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000011604's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAPG00000011604	CHD9	77	50.696	ENSCAPG00000007952	CHD7	65	70.760
ENSCAPG00000011604	CHD9	63	47.741	ENSCAPG00000016749	CHD8	71	46.888

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000011604	CHD9	81	79.597	ENSG00000177200	CHD9	82	96.774	Homo_sapiens
ENSCAPG00000011604	CHD9	74	60.593	ENSAPOG00000023034	chd9	84	54.688	Acanthochromis_polyacanthus
ENSCAPG00000011604	CHD9	81	79.681	ENSAMEG00000016232	CHD9	81	78.925	Ailuropoda_melanoleuca
ENSCAPG00000011604	CHD9	77	62.081	ENSACIG00000004097	chd9	79	61.565	Amphilophus_citrinellus
ENSCAPG00000011604	CHD9	57	63.953	ENSAOCG00000005487	chd9	74	60.135	Amphiprion_ocellaris
ENSCAPG00000011604	CHD9	57	63.953	ENSAPEG00000009859	chd9	73	60.135	Amphiprion_percula
ENSCAPG00000011604	CHD9	62	60.508	ENSATEG00000002748	chd9	79	56.085	Anabas_testudineus
ENSCAPG00000011604	CHD9	96	70.599	ENSAPLG00000002826	CHD9	91	82.746	Anas_platyrhynchos
ENSCAPG00000011604	CHD9	81	65.268	ENSACAG00000016150	CHD9	78	68.421	Anolis_carolinensis
ENSCAPG00000011604	CHD9	81	79.933	ENSANAG00000015630	CHD9	82	96.774	Aotus_nancymaae
ENSCAPG00000011604	CHD9	56	61.322	ENSACLG00000016899	chd9	67	54.812	Astatotilapia_calliptera
ENSCAPG00000011604	CHD9	59	61.250	ENSAMXG00000005652	chd9	75	59.214	Astyanax_mexicanus
ENSCAPG00000011604	CHD9	82	79.597	ENSBTAG00000002287	CHD9	81	79.513	Bos_taurus
ENSCAPG00000011604	CHD9	82	79.177	ENSCJAG00000001573	CHD9	82	96.774	Callithrix_jacchus
ENSCAPG00000011604	CHD9	81	79.429	ENSCAFG00000009699	CHD9	81	78.589	Canis_familiaris
ENSCAPG00000011604	CHD9	81	79.429	ENSCAFG00020002879	CHD9	77	96.774	Canis_lupus_dingo
ENSCAPG00000011604	CHD9	96	79.528	ENSCHIG00000021000	CHD9	92	94.366	Capra_hircus
ENSCAPG00000011604	CHD9	82	78.908	ENSTSYG00000007693	CHD9	81	96.774	Carlito_syrichta
ENSCAPG00000011604	CHD9	96	85.551	ENSCPOG00000036544	CHD9	80	85.551	Cavia_porcellus
ENSCAPG00000011604	CHD9	81	79.933	ENSCCAG00000036178	CHD9	82	96.774	Cebus_capucinus
ENSCAPG00000011604	CHD9	81	79.345	ENSCATG00000036753	CHD9	82	96.774	Cercocebus_atys
ENSCAPG00000011604	CHD9	81	81.749	ENSCLAG00000007137	CHD9	91	100.000	Chinchilla_lanigera
ENSCAPG00000011604	CHD9	81	79.261	ENSCSAG00000005311	CHD9	81	79.009	Chlorocebus_sabaeus
ENSCAPG00000011604	CHD9	73	98.077	ENSCHOG00000003935	CHD9	70	98.077	Choloepus_hoffmanni
ENSCAPG00000011604	CHD9	84	87.029	ENSCPBG00000012459	CHD9	92	87.029	Chrysemys_picta_bellii
ENSCAPG00000011604	CHD9	81	79.513	ENSCANG00000030349	CHD9	82	96.774	Colobus_angolensis_palliatus
ENSCAPG00000011604	CHD9	81	77.265	ENSCGRG00001016150	Chd9	81	76.510	Cricetulus_griseus_chok1gshd
ENSCAPG00000011604	CHD9	81	77.265	ENSCGRG00000012850	Chd9	91	94.545	Cricetulus_griseus_crigri
ENSCAPG00000011604	CHD9	59	61.898	ENSCSEG00000009209	chd9	72	59.060	Cynoglossus_semilaevis
ENSCAPG00000011604	CHD9	57	63.780	ENSCVAG00000016195	chd9	66	55.245	Cyprinodon_variegatus
ENSCAPG00000011604	CHD9	60	60.567	ENSDARG00000074498	chd9	76	58.491	Danio_rerio
ENSCAPG00000011604	CHD9	60	73.887	ENSDNOG00000006045	CHD9	90	94.366	Dasypus_novemcinctus
ENSCAPG00000011604	CHD9	51	90.604	ENSDORG00000008523	-	73	90.794	Dipodomys_ordii
ENSCAPG00000011604	CHD9	72	89.172	ENSETEG00000009565	CHD9	67	90.361	Echinops_telfairi
ENSCAPG00000011604	CHD9	85	89.922	ENSEASG00005014832	CHD9	92	93.846	Equus_asinus_asinus
ENSCAPG00000011604	CHD9	81	79.933	ENSECAG00000011505	CHD9	81	79.093	Equus_caballus
ENSCAPG00000011604	CHD9	63	90.909	ENSEEUG00000014515	CHD9	64	90.909	Erinaceus_europaeus
ENSCAPG00000011604	CHD9	72	64.384	ENSELUG00000006031	chd9	82	76.243	Esox_lucius
ENSCAPG00000011604	CHD9	81	78.757	ENSFCAG00000022534	CHD9	82	96.774	Felis_catus
ENSCAPG00000011604	CHD9	62	71.107	ENSFALG00000013276	CHD9	78	69.314	Ficedula_albicollis
ENSCAPG00000011604	CHD9	81	80.940	ENSFDAG00000021037	CHD9	81	81.780	Fukomys_damarensis
ENSCAPG00000011604	CHD9	60	62.748	ENSFHEG00000006068	chd9	76	60.054	Fundulus_heteroclitus
ENSCAPG00000011604	CHD9	58	78.512	ENSGMOG00000006040	chd9	71	78.512	Gadus_morhua
ENSCAPG00000011604	CHD9	77	83.832	ENSGALG00000039178	CHD9	78	83.832	Gallus_gallus
ENSCAPG00000011604	CHD9	78	60.623	ENSGAFG00000010014	chd9	91	58.030	Gambusia_affinis
ENSCAPG00000011604	CHD9	71	60.619	ENSGACG00000016694	chd9	85	60.423	Gasterosteus_aculeatus
ENSCAPG00000011604	CHD9	81	79.261	ENSGGOG00000014816	CHD9	82	96.774	Gorilla_gorilla
ENSCAPG00000011604	CHD9	69	62.457	ENSHBUG00000023322	chd9	74	81.967	Haplochromis_burtoni
ENSCAPG00000011604	CHD9	82	80.404	ENSHGLG00000014938	CHD9	91	100.000	Heterocephalus_glaber_female
ENSCAPG00000011604	CHD9	78	60.736	ENSHCOG00000000937	chd9	82	58.020	Hippocampus_comes
ENSCAPG00000011604	CHD9	60	61.034	ENSIPUG00000016448	chd9	76	80.328	Ictalurus_punctatus
ENSCAPG00000011604	CHD9	81	79.916	ENSSTOG00000022273	CHD9	91	98.182	Ictidomys_tridecemlineatus
ENSCAPG00000011604	CHD9	51	90.940	ENSJJAG00000015741	-	73	91.429	Jaculus_jaculus
ENSCAPG00000011604	CHD9	58	63.813	ENSKMAG00000016784	chd9	72	60.459	Kryptolebias_marmoratus
ENSCAPG00000011604	CHD9	59	61.851	ENSLBEG00000012077	chd9	73	60.442	Labrus_bergylta
ENSCAPG00000011604	CHD9	81	59.174	ENSLACG00000005557	CHD9	78	68.269	Latimeria_chalumnae
ENSCAPG00000011604	CHD9	80	60.320	ENSLOCG00000007225	chd9	88	66.897	Lepisosteus_oculatus
ENSCAPG00000011604	CHD9	81	78.607	ENSLAFG00000015374	CHD9	81	77.768	Loxodonta_africana
ENSCAPG00000011604	CHD9	81	79.429	ENSMFAG00000041354	CHD9	82	96.774	Macaca_fascicularis
ENSCAPG00000011604	CHD9	81	79.345	ENSMMUG00000016310	CHD9	82	96.774	Macaca_mulatta
ENSCAPG00000011604	CHD9	81	79.345	ENSMNEG00000031494	CHD9	81	79.093	Macaca_nemestrina
ENSCAPG00000011604	CHD9	81	79.429	ENSMLEG00000043219	CHD9	82	96.774	Mandrillus_leucophaeus
ENSCAPG00000011604	CHD9	65	59.830	ENSMAMG00000003909	chd9	74	56.900	Mastacembelus_armatus
ENSCAPG00000011604	CHD9	64	61.441	ENSMZEG00005006581	chd9	78	60.410	Maylandia_zebra
ENSCAPG00000011604	CHD9	92	70.341	ENSMGAG00000004642	CHD9	79	81.176	Meleagris_gallopavo
ENSCAPG00000011604	CHD9	81	80.185	ENSMICG00000016679	CHD9	77	95.161	Microcebus_murinus
ENSCAPG00000011604	CHD9	61	60.366	ENSMMOG00000016406	chd9	77	60.976	Mola_mola
ENSCAPG00000011604	CHD9	68	74.130	ENSMODG00000013142	-	63	89.085	Monodelphis_domestica
ENSCAPG00000011604	CHD9	59	61.952	ENSMALG00000013306	chd9	73	56.089	Monopterus_albus
ENSCAPG00000011604	CHD9	81	74.602	MGP_CAROLIEiJ_G0031364	Chd9	81	73.847	Mus_caroli
ENSCAPG00000011604	CHD9	81	74.602	ENSMUSG00000056608	Chd9	91	94.545	Mus_musculus
ENSCAPG00000011604	CHD9	81	74.183	MGP_PahariEiJ_G0022964	Chd9	80	73.428	Mus_pahari
ENSCAPG00000011604	CHD9	81	74.518	MGP_SPRETEiJ_G0032483	Chd9	81	73.764	Mus_spretus
ENSCAPG00000011604	CHD9	81	79.513	ENSMPUG00000003285	CHD9	79	93.413	Mustela_putorius_furo
ENSCAPG00000011604	CHD9	81	79.513	ENSMLUG00000004456	CHD9	81	78.925	Myotis_lucifugus
ENSCAPG00000011604	CHD9	56	62.571	ENSNBRG00000009423	chd9	75	60.676	Neolamprologus_brichardi
ENSCAPG00000011604	CHD9	70	79.345	ENSNLEG00000001026	CHD9	79	79.093	Nomascus_leucogenys
ENSCAPG00000011604	CHD9	62	94.737	ENSMEUG00000008222	-	64	94.737	Notamacropus_eugenii
ENSCAPG00000011604	CHD9	72	96.241	ENSOPRG00000011168	CHD9	66	96.241	Ochotona_princeps
ENSCAPG00000011604	CHD9	81	81.665	ENSODEG00000004466	CHD9	79	88.623	Octodon_degus
ENSCAPG00000011604	CHD9	60	62.482	ENSONIG00000002816	chd9	79	60.594	Oreochromis_niloticus
ENSCAPG00000011604	CHD9	81	71.119	ENSOANG00000013401	CHD9	81	71.405	Ornithorhynchus_anatinus
ENSCAPG00000011604	CHD9	62	75.778	ENSOCUG00000001016	CHD9	77	75.372	Oryctolagus_cuniculus
ENSCAPG00000011604	CHD9	61	60.426	ENSORLG00000013810	chd9	72	60.135	Oryzias_latipes
ENSCAPG00000011604	CHD9	65	60.288	ENSORLG00020020665	chd9	70	55.846	Oryzias_latipes_hni
ENSCAPG00000011604	CHD9	60	62.162	ENSORLG00015019126	chd9	78	54.902	Oryzias_latipes_hsok
ENSCAPG00000011604	CHD9	81	78.709	ENSOGAG00000002110	CHD9	81	77.871	Otolemur_garnettii
ENSCAPG00000011604	CHD9	81	80.185	ENSOARG00000017664	CHD9	81	79.345	Ovis_aries
ENSCAPG00000011604	CHD9	62	78.711	ENSPPAG00000039388	-	78	77.311	Pan_paniscus
ENSCAPG00000011604	CHD9	81	78.757	ENSPPRG00000004801	CHD9	82	96.774	Panthera_pardus
ENSCAPG00000011604	CHD9	81	78.673	ENSPTIG00000021854	CHD9	82	96.774	Panthera_tigris_altaica
ENSCAPG00000011604	CHD9	81	79.597	ENSPTRG00000008113	CHD9	82	96.774	Pan_troglodytes
ENSCAPG00000011604	CHD9	81	79.345	ENSPANG00000019307	CHD9	82	96.774	Papio_anubis
ENSCAPG00000011604	CHD9	75	62.986	ENSPKIG00000021876	chd9	70	65.873	Paramormyrops_kingsleyae
ENSCAPG00000011604	CHD9	90	60.489	ENSPKIG00000025401	-	86	76.064	Paramormyrops_kingsleyae
ENSCAPG00000011604	CHD9	60	60.216	ENSPSIG00000008099	CHD9	93	59.818	Pelodiscus_sinensis
ENSCAPG00000011604	CHD9	50	68.543	ENSPMAG00000006035	-	65	69.811	Petromyzon_marinus
ENSCAPG00000011604	CHD9	81	88.732	ENSPCIG00000017215	CHD9	93	88.571	Phascolarctos_cinereus
ENSCAPG00000011604	CHD9	78	60.765	ENSPFOG00000015839	chd9	89	54.514	Poecilia_formosa
ENSCAPG00000011604	CHD9	78	60.765	ENSPLAG00000011118	chd9	89	54.514	Poecilia_latipinna
ENSCAPG00000011604	CHD9	59	62.464	ENSPMEG00000015106	chd9	66	55.789	Poecilia_mexicana
ENSCAPG00000011604	CHD9	74	60.765	ENSPREG00000006473	chd9	88	58.165	Poecilia_reticulata
ENSCAPG00000011604	CHD9	81	79.597	ENSPPYG00000007348	CHD9	81	79.345	Pongo_abelii
ENSCAPG00000011604	CHD9	68	94.545	ENSPCAG00000007564	CHD9	73	94.595	Procavia_capensis
ENSCAPG00000011604	CHD9	81	80.437	ENSPCOG00000028433	CHD9	82	96.774	Propithecus_coquereli
ENSCAPG00000011604	CHD9	81	73.408	ENSPVAG00000015617	CHD9	80	72.818	Pteropus_vampyrus
ENSCAPG00000011604	CHD9	57	62.121	ENSPNYG00000010947	chd9	75	60.676	Pundamilia_nyererei
ENSCAPG00000011604	CHD9	69	59.864	ENSPNAG00000024141	chd9	79	59.524	Pygocentrus_nattereri
ENSCAPG00000011604	CHD9	72	72.376	ENSRNOG00000049302	Chd9	90	88.732	Rattus_norvegicus
ENSCAPG00000011604	CHD9	51	90.604	ENSRBIG00000035553	CHD9	82	96.774	Rhinopithecus_bieti
ENSCAPG00000011604	CHD9	63	73.986	ENSRROG00000033278	CHD9	82	96.774	Rhinopithecus_roxellana
ENSCAPG00000011604	CHD9	81	80.017	ENSSBOG00000030240	CHD9	82	95.161	Saimiri_boliviensis_boliviensis
ENSCAPG00000011604	CHD9	81	70.854	ENSSHAG00000002719	CHD9	81	70.067	Sarcophilus_harrisii
ENSCAPG00000011604	CHD9	80	56.591	ENSSFOG00015020209	chd9	78	60.354	Scleropages_formosus
ENSCAPG00000011604	CHD9	76	62.718	ENSSFOG00015001327	chd9	87	62.105	Scleropages_formosus
ENSCAPG00000011604	CHD9	59	60.993	ENSSMAG00000008953	chd9	90	61.066	Scophthalmus_maximus
ENSCAPG00000011604	CHD9	74	61.017	ENSSDUG00000006139	chd9	89	59.189	Seriola_dumerili
ENSCAPG00000011604	CHD9	57	64.368	ENSSLDG00000017818	chd9	73	60.270	Seriola_lalandi_dorsalis
ENSCAPG00000011604	CHD9	90	91.549	ENSSARG00000010632	CHD9	87	91.549	Sorex_araneus
ENSCAPG00000011604	CHD9	57	63.707	ENSSPAG00000021649	chd9	75	60.135	Stegastes_partitus
ENSCAPG00000011604	CHD9	96	79.916	ENSSSCG00000033591	CHD9	92	95.070	Sus_scrofa
ENSCAPG00000011604	CHD9	70	71.311	ENSTGUG00000007476	CHD9	79	69.085	Taeniopygia_guttata
ENSCAPG00000011604	CHD9	57	61.041	ENSTRUG00000009125	chd9	77	60.861	Takifugu_rubripes
ENSCAPG00000011604	CHD9	51	52.429	ENSTNIG00000003825	chd9	54	55.782	Tetraodon_nigroviridis
ENSCAPG00000011604	CHD9	63	100.000	ENSTBEG00000016052	-	71	100.000	Tupaia_belangeri
ENSCAPG00000011604	CHD9	70	80.353	ENSTTRG00000012674	CHD9	71	79.513	Tursiops_truncatus
ENSCAPG00000011604	CHD9	62	96.596	ENSUMAG00000004043	CHD9	89	97.143	Ursus_maritimus
ENSCAPG00000011604	CHD9	79	84.935	ENSVPAG00000001374	CHD9	78	84.935	Vicugna_pacos
ENSCAPG00000011604	CHD9	81	79.513	ENSVVUG00000019435	CHD9	81	78.673	Vulpes_vulpes
ENSCAPG00000011604	CHD9	80	66.864	ENSXETG00000000349	chd9	93	69.965	Xenopus_tropicalis
ENSCAPG00000011604	CHD9	59	62.606	ENSXCOG00000012997	chd9	75	59.919	Xiphophorus_couchianus
ENSCAPG00000011604	CHD9	64	62.606	ENSXMAG00000016192	chd9	73	62.040	Xiphophorus_maculatus