EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAPG00000011616 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Minus strand
Length: 1472 bases
Position: chrAVPZ01000445.1:10108150-10109621
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000010316	RRM_1	PF00076.22	1.1e-31	1	2
ENSCAPP00000010316	RRM_1	PF00076.22	1.1e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000014046	-	1437	-	ENSCAPP00000010316	478 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000011616's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000011616's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAPG00000011616	-	99	72.211	ENSCAPG00000002354	-	97	70.947
ENSCAPG00000011616	-	100	69.665	ENSCAPG00000002723	-	100	68.201
ENSCAPG00000011616	-	99	77.183	ENSCAPG00000006522	-	84	76.124

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000011616	-	100	95.436	ENSG00000147140	NONO	100	98.429	Homo_sapiens
ENSCAPG00000011616	-	95	59.913	ENSAPOG00000023320	nono	95	63.014	Acanthochromis_polyacanthus
ENSCAPG00000011616	-	100	95.643	ENSAMEG00000016057	NONO	100	95.643	Ailuropoda_melanoleuca
ENSCAPG00000011616	-	77	70.933	ENSACIG00000019987	nono	94	65.287	Amphilophus_citrinellus
ENSCAPG00000011616	-	95	59.477	ENSAOCG00000018863	nono	95	62.299	Amphiprion_ocellaris
ENSCAPG00000011616	-	73	70.423	ENSAPEG00000011383	nono	87	72.113	Amphiprion_percula
ENSCAPG00000011616	-	87	86.019	ENSAPLG00000002642	NONO	98	85.782	Anas_platyrhynchos
ENSCAPG00000011616	-	100	80.331	ENSACAG00000015026	NONO	99	80.538	Anolis_carolinensis
ENSCAPG00000011616	-	82	73.724	ENSANAG00000035751	-	96	85.065	Aotus_nancymaae
ENSCAPG00000011616	-	100	95.436	ENSANAG00000033266	-	100	95.436	Aotus_nancymaae
ENSCAPG00000011616	-	99	73.651	ENSANAG00000027089	-	99	74.066	Aotus_nancymaae
ENSCAPG00000011616	-	70	73.761	ENSACLG00000012045	nono	80	78.073	Astatotilapia_calliptera
ENSCAPG00000011616	-	97	62.105	ENSAMXG00000033933	nono	91	63.048	Astyanax_mexicanus
ENSCAPG00000011616	-	100	95.436	ENSBTAG00000012152	NONO	100	95.436	Bos_taurus
ENSCAPG00000011616	-	100	95.436	ENSCJAG00000036744	NONO	100	95.436	Callithrix_jacchus
ENSCAPG00000011616	-	91	85.912	ENSCAFG00000030809	-	99	84.296	Canis_familiaris
ENSCAPG00000011616	-	100	95.643	ENSCAFG00000017071	NONO	100	95.643	Canis_familiaris
ENSCAPG00000011616	-	85	85.019	ENSCAFG00000013766	-	91	95.146	Canis_familiaris
ENSCAPG00000011616	-	100	92.324	ENSCAFG00000003207	-	100	94.398	Canis_familiaris
ENSCAPG00000011616	-	100	90.871	ENSCAFG00020020298	-	100	90.456	Canis_lupus_dingo
ENSCAPG00000011616	-	100	95.436	ENSCHIG00000000365	-	100	95.436	Capra_hircus
ENSCAPG00000011616	-	77	86.757	ENSCHIG00000009602	-	89	86.486	Capra_hircus
ENSCAPG00000011616	-	100	90.456	ENSTSYG00000007423	-	99	90.041	Carlito_syrichta
ENSCAPG00000011616	-	100	81.172	ENSTSYG00000034207	-	99	83.054	Carlito_syrichta
ENSCAPG00000011616	-	99	83.160	ENSTSYG00000036306	-	100	83.576	Carlito_syrichta
ENSCAPG00000011616	-	100	97.921	ENSCPOG00000023605	-	100	97.921	Cavia_porcellus
ENSCAPG00000011616	-	100	98.963	ENSCPOG00000010263	-	100	98.963	Cavia_porcellus
ENSCAPG00000011616	-	80	87.887	ENSCPOG00000036719	-	93	89.948	Cavia_porcellus
ENSCAPG00000011616	-	100	88.285	ENSCPOG00000038668	-	100	88.285	Cavia_porcellus
ENSCAPG00000011616	-	100	71.667	ENSCPOG00000026604	-	99	70.417	Cavia_porcellus
ENSCAPG00000011616	-	100	84.647	ENSCATG00000039509	NONO	100	84.232	Cercocebus_atys
ENSCAPG00000011616	-	100	96.473	ENSCLAG00000003642	NONO	100	96.473	Chinchilla_lanigera
ENSCAPG00000011616	-	100	80.527	ENSCPBG00000016659	NONO	100	79.716	Chrysemys_picta_bellii
ENSCAPG00000011616	-	100	95.436	ENSCANG00000025310	NONO	100	95.436	Colobus_angolensis_palliatus
ENSCAPG00000011616	-	100	93.361	ENSCGRG00001000065	Nono	100	92.946	Cricetulus_griseus_chok1gshd
ENSCAPG00000011616	-	87	97.852	ENSCGRG00000004508	Nono	100	97.852	Cricetulus_griseus_crigri
ENSCAPG00000011616	-	75	70.924	ENSCSEG00000010708	nono	90	63.844	Cynoglossus_semilaevis
ENSCAPG00000011616	-	75	70.572	ENSCSEG00000008189	NONO	94	63.616	Cynoglossus_semilaevis
ENSCAPG00000011616	-	74	70.055	ENSCVAG00000003978	nono	82	71.350	Cyprinodon_variegatus
ENSCAPG00000011616	-	90	63.781	ENSDARG00000020482	nono	87	73.451	Danio_rerio
ENSCAPG00000011616	-	54	82.609	ENSDNOG00000031430	-	99	82.222	Dasypus_novemcinctus
ENSCAPG00000011616	-	62	71.141	ENSDNOG00000032215	-	99	71.186	Dasypus_novemcinctus
ENSCAPG00000011616	-	100	94.398	ENSDORG00000009294	Nono	100	94.398	Dipodomys_ordii
ENSCAPG00000011616	-	86	98.028	ENSETEG00000013823	NONO	77	98.028	Echinops_telfairi
ENSCAPG00000011616	-	100	95.643	ENSECAG00000008502	NONO	100	95.643	Equus_caballus
ENSCAPG00000011616	-	100	94.398	ENSEEUG00000014404	NONO	100	94.398	Erinaceus_europaeus
ENSCAPG00000011616	-	97	61.667	ENSELUG00000001083	nono	93	64.414	Esox_lucius
ENSCAPG00000011616	-	100	95.643	ENSFCAG00000043511	-	100	95.643	Felis_catus
ENSCAPG00000011616	-	100	74.167	ENSFALG00000011765	NONO	100	73.333	Ficedula_albicollis
ENSCAPG00000011616	-	100	75.826	ENSFDAG00000006143	-	100	75.826	Fukomys_damarensis
ENSCAPG00000011616	-	100	95.643	ENSFDAG00000012809	-	100	95.643	Fukomys_damarensis
ENSCAPG00000011616	-	72	70.339	ENSFHEG00000009714	nono	85	70.248	Fundulus_heteroclitus
ENSCAPG00000011616	-	100	79.716	ENSGALG00000005507	NONO	100	79.513	Gallus_gallus
ENSCAPG00000011616	-	73	71.111	ENSGAFG00000011460	nono	83	72.452	Gambusia_affinis
ENSCAPG00000011616	-	83	65.356	ENSGACG00000011824	nono	94	63.699	Gasterosteus_aculeatus
ENSCAPG00000011616	-	100	82.231	ENSGAGG00000025400	-	91	81.405	Gopherus_agassizii
ENSCAPG00000011616	-	91	94.989	ENSGGOG00000006194	NONO	97	94.989	Gorilla_gorilla
ENSCAPG00000011616	-	100	83.473	ENSGGOG00000036327	-	99	83.264	Gorilla_gorilla
ENSCAPG00000011616	-	77	71.200	ENSHBUG00000010741	nono	94	65.287	Haplochromis_burtoni
ENSCAPG00000011616	-	100	95.851	ENSHGLG00000005550	NONO	100	95.851	Heterocephalus_glaber_female
ENSCAPG00000011616	-	100	95.851	ENSHGLG00100013511	NONO	100	95.851	Heterocephalus_glaber_male
ENSCAPG00000011616	-	81	67.750	ENSHCOG00000016441	nono	84	74.576	Hippocampus_comes
ENSCAPG00000011616	-	79	69.388	ENSIPUG00000018271	nono	91	63.170	Ictalurus_punctatus
ENSCAPG00000011616	-	100	95.643	ENSSTOG00000015869	NONO	100	95.643	Ictidomys_tridecemlineatus
ENSCAPG00000011616	-	100	75.676	ENSJJAG00000001971	-	100	75.314	Jaculus_jaculus
ENSCAPG00000011616	-	100	94.606	ENSJJAG00000017151	-	100	94.606	Jaculus_jaculus
ENSCAPG00000011616	-	91	61.086	ENSKMAG00000002798	nono	82	70.799	Kryptolebias_marmoratus
ENSCAPG00000011616	-	81	68.354	ENSLBEG00000022623	nono	84	73.130	Labrus_bergylta
ENSCAPG00000011616	-	81	74.235	ENSLACG00000000598	NONO	84	81.586	Latimeria_chalumnae
ENSCAPG00000011616	-	100	63.340	ENSLOCG00000014739	nono	93	68.027	Lepisosteus_oculatus
ENSCAPG00000011616	-	100	95.851	ENSLAFG00000013422	NONO	100	95.851	Loxodonta_africana
ENSCAPG00000011616	-	100	95.436	ENSMFAG00000041557	NONO	100	95.436	Macaca_fascicularis
ENSCAPG00000011616	-	79	98.429	ENSMMUG00000020481	NONO	100	98.429	Macaca_mulatta
ENSCAPG00000011616	-	100	95.436	ENSMNEG00000009698	NONO	100	95.436	Macaca_nemestrina
ENSCAPG00000011616	-	100	95.436	ENSMLEG00000042452	NONO	100	95.436	Mandrillus_leucophaeus
ENSCAPG00000011616	-	95	61.123	ENSMAMG00000007314	nono	94	64.073	Mastacembelus_armatus
ENSCAPG00000011616	-	70	73.761	ENSMZEG00005010199	nono	80	78.073	Maylandia_zebra
ENSCAPG00000011616	-	87	86.256	ENSMGAG00000008869	NONO	98	86.019	Meleagris_gallopavo
ENSCAPG00000011616	-	100	95.436	ENSMAUG00000016243	Nono	100	95.436	Mesocricetus_auratus
ENSCAPG00000011616	-	100	95.228	ENSMICG00000000232	NONO	100	95.228	Microcebus_murinus
ENSCAPG00000011616	-	90	96.092	ENSMOCG00000005532	-	96	95.824	Microtus_ochrogaster
ENSCAPG00000011616	-	100	80.753	ENSMOCG00000021293	-	100	81.172	Microtus_ochrogaster
ENSCAPG00000011616	-	100	73.859	ENSMOCG00000020099	-	95	75.519	Microtus_ochrogaster
ENSCAPG00000011616	-	83	66.093	ENSMMOG00000015503	nono	85	65.438	Mola_mola
ENSCAPG00000011616	-	90	89.631	ENSMODG00000004445	NONO	99	89.327	Monodelphis_domestica
ENSCAPG00000011616	-	77	68.254	ENSMALG00000001310	nono	87	71.074	Monopterus_albus
ENSCAPG00000011616	-	100	93.776	ENSMUSG00000031311	Nono	100	92.946	Mus_musculus
ENSCAPG00000011616	-	100	94.191	MGP_PahariEiJ_G0031826	Nono	100	92.946	Mus_pahari
ENSCAPG00000011616	-	100	95.643	ENSMPUG00000004937	NONO	100	95.643	Mustela_putorius_furo
ENSCAPG00000011616	-	100	95.021	ENSMLUG00000002489	NONO	89	95.021	Myotis_lucifugus
ENSCAPG00000011616	-	100	95.021	ENSNGAG00000010857	Nono	100	95.021	Nannospalax_galili
ENSCAPG00000011616	-	77	71.467	ENSNBRG00000017083	nono	94	65.517	Neolamprologus_brichardi
ENSCAPG00000011616	-	100	90.664	ENSNLEG00000001278	NONO	100	98.429	Nomascus_leucogenys
ENSCAPG00000011616	-	100	79.461	ENSMEUG00000004294	NONO	100	79.253	Notamacropus_eugenii
ENSCAPG00000011616	-	58	100.000	ENSOPRG00000001139	-	69	100.000	Ochotona_princeps
ENSCAPG00000011616	-	100	88.174	ENSODEG00000002994	-	100	88.174	Octodon_degus
ENSCAPG00000011616	-	100	87.344	ENSODEG00000002224	-	100	87.137	Octodon_degus
ENSCAPG00000011616	-	87	69.286	ENSODEG00000011878	-	100	62.971	Octodon_degus
ENSCAPG00000011616	-	97	64.719	ENSODEG00000004982	-	99	64.655	Octodon_degus
ENSCAPG00000011616	-	88	66.745	ENSODEG00000000530	-	89	66.357	Octodon_degus
ENSCAPG00000011616	-	77	71.200	ENSONIG00000020497	nono	94	65.287	Oreochromis_niloticus
ENSCAPG00000011616	-	99	58.071	ENSOCUG00000024801	-	97	57.773	Oryctolagus_cuniculus
ENSCAPG00000011616	-	99	87.967	ENSOCUG00000021848	-	90	95.550	Oryctolagus_cuniculus
ENSCAPG00000011616	-	86	62.530	ENSORLG00000012801	nono	83	69.972	Oryzias_latipes
ENSCAPG00000011616	-	71	70.809	ENSORLG00020003761	nono	78	72.543	Oryzias_latipes_hni
ENSCAPG00000011616	-	86	62.530	ENSORLG00015018033	nono	83	69.972	Oryzias_latipes_hsok
ENSCAPG00000011616	-	86	61.939	ENSOMEG00000012702	nono	82	71.667	Oryzias_melastigma
ENSCAPG00000011616	-	100	95.238	ENSOGAG00000004834	NONO	100	95.238	Otolemur_garnettii
ENSCAPG00000011616	-	100	95.228	ENSOARG00000016966	NONO	99	95.228	Ovis_aries
ENSCAPG00000011616	-	100	95.436	ENSPPAG00000032487	NONO	100	95.436	Pan_paniscus
ENSCAPG00000011616	-	100	82.573	ENSPPAG00000041394	-	99	82.780	Pan_paniscus
ENSCAPG00000011616	-	100	95.643	ENSPPRG00000024537	-	100	95.643	Panthera_pardus
ENSCAPG00000011616	-	100	95.436	ENSPTIG00000016068	-	100	95.436	Panthera_tigris_altaica
ENSCAPG00000011616	-	100	82.365	ENSPTRG00000051228	-	100	82.573	Pan_troglodytes
ENSCAPG00000011616	-	100	95.436	ENSPTRG00000022010	NONO	100	95.436	Pan_troglodytes
ENSCAPG00000011616	-	100	95.436	ENSPANG00000013979	NONO	100	95.436	Papio_anubis
ENSCAPG00000011616	-	100	69.574	ENSPANG00000035017	-	99	67.343	Papio_anubis
ENSCAPG00000011616	-	92	64.565	ENSPKIG00000014500	nono	93	67.126	Paramormyrops_kingsleyae
ENSCAPG00000011616	-	91	62.361	ENSPKIG00000019475	-	91	78.090	Paramormyrops_kingsleyae
ENSCAPG00000011616	-	100	81.818	ENSPSIG00000010678	NONO	99	81.198	Pelodiscus_sinensis
ENSCAPG00000011616	-	85	62.740	ENSPMGG00000023030	nono	82	71.350	Periophthalmus_magnuspinnatus
ENSCAPG00000011616	-	100	93.361	ENSPEMG00000011150	Nono	100	92.946	Peromyscus_maniculatus_bairdii
ENSCAPG00000011616	-	100	84.058	ENSPCIG00000026515	NONO	100	83.851	Phascolarctos_cinereus
ENSCAPG00000011616	-	73	69.101	ENSPFOG00000016436	nono	82	68.802	Poecilia_formosa
ENSCAPG00000011616	-	73	69.722	ENSPLAG00000017492	nono	82	70.799	Poecilia_latipinna
ENSCAPG00000011616	-	77	67.905	ENSPMEG00000021530	nono	83	71.350	Poecilia_mexicana
ENSCAPG00000011616	-	85	64.792	ENSPREG00000010014	nono	82	71.625	Poecilia_reticulata
ENSCAPG00000011616	-	100	95.021	ENSPPYG00000020451	NONO	100	95.021	Pongo_abelii
ENSCAPG00000011616	-	100	93.568	ENSPCAG00000002541	NONO	100	93.154	Procavia_capensis
ENSCAPG00000011616	-	100	95.643	ENSPCOG00000008197	NONO	100	95.643	Propithecus_coquereli
ENSCAPG00000011616	-	100	94.606	ENSPVAG00000016503	NONO	100	94.606	Pteropus_vampyrus
ENSCAPG00000011616	-	95	61.803	ENSPNAG00000008232	nono	82	62.844	Pygocentrus_nattereri
ENSCAPG00000011616	-	100	94.191	ENSRNOG00000003689	Nono	100	93.154	Rattus_norvegicus
ENSCAPG00000011616	-	76	98.361	ENSRBIG00000037966	NONO	100	98.361	Rhinopithecus_bieti
ENSCAPG00000011616	-	100	95.228	ENSRROG00000043203	NONO	100	95.228	Rhinopithecus_roxellana
ENSCAPG00000011616	-	100	89.834	ENSSBOG00000027683	-	99	89.419	Saimiri_boliviensis_boliviensis
ENSCAPG00000011616	-	99	74.167	ENSSBOG00000018932	-	99	74.167	Saimiri_boliviensis_boliviensis
ENSCAPG00000011616	-	100	95.228	ENSSBOG00000032772	-	100	95.228	Saimiri_boliviensis_boliviensis
ENSCAPG00000011616	-	100	86.722	ENSSHAG00000010195	NONO	100	86.515	Sarcophilus_harrisii
ENSCAPG00000011616	-	89	68.037	ENSSFOG00015008964	nono	93	66.895	Scleropages_formosus
ENSCAPG00000011616	-	95	59.307	ENSSFOG00015000137	-	75	77.465	Scleropages_formosus
ENSCAPG00000011616	-	95	60.129	ENSSDUG00000021886	nono	94	63.927	Seriola_dumerili
ENSCAPG00000011616	-	95	60.129	ENSSLDG00000012392	nono	94	63.927	Seriola_lalandi_dorsalis
ENSCAPG00000011616	-	100	87.344	ENSSARG00000007959	NONO	100	81.176	Sorex_araneus
ENSCAPG00000011616	-	79	84.115	ENSSPUG00000003116	NONO	100	83.594	Sphenodon_punctatus
ENSCAPG00000011616	-	95	60.349	ENSSPAG00000012663	nono	95	63.927	Stegastes_partitus
ENSCAPG00000011616	-	100	95.643	ENSSSCG00000023245	NONO	100	95.643	Sus_scrofa
ENSCAPG00000011616	-	100	80.825	ENSTGUG00000007048	NONO	100	79.794	Taeniopygia_guttata
ENSCAPG00000011616	-	78	69.634	ENSTRUG00000005554	nono	94	64.773	Takifugu_rubripes
ENSCAPG00000011616	-	100	95.643	ENSTTRG00000009605	NONO	100	95.643	Tursiops_truncatus
ENSCAPG00000011616	-	100	90.871	ENSUAMG00000008220	NONO	100	90.456	Ursus_americanus
ENSCAPG00000011616	-	100	95.643	ENSUMAG00000021550	NONO	100	95.643	Ursus_maritimus
ENSCAPG00000011616	-	100	95.643	ENSVPAG00000002272	NONO	100	95.643	Vicugna_pacos
ENSCAPG00000011616	-	100	89.278	ENSVVUG00000003390	-	100	88.866	Vulpes_vulpes
ENSCAPG00000011616	-	100	70.807	ENSXETG00000020868	nono	99	70.807	Xenopus_tropicalis
ENSCAPG00000011616	-	73	71.111	ENSXCOG00000015587	nono	83	72.176	Xiphophorus_couchianus
ENSCAPG00000011616	-	73	71.111	ENSXMAG00000019883	nono	83	72.176	Xiphophorus_maculatus