EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000011647 (Gene tree)
Gene ID: -
Gene Symbol: RTCB
Alias: C22orf28|FAAP|HSPC117
Full Name: RNA 2'%2C3'-cyclic phosphate and 5'-OH ligase
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Minus strand
Length: 12139 bases
Position: chrAVPZ01000046.1:493642-505780
Accession: 26935
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000010379	RtcB	PF01139.17	4e-146	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000014111	RTCB-201	1491	-	ENSCAPP00000010379	496 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000011647's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000011647's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000011647	RTCB	96	99.161	ENSG00000100220	RTCB	94	99.161	Homo_sapiens
ENSCAPG00000011647	RTCB	96	94.130	ENSAPOG00000006040	rtcb	94	94.130	Acanthochromis_polyacanthus
ENSCAPG00000011647	RTCB	96	98.952	ENSAMEG00000016152	RTCB	94	98.952	Ailuropoda_melanoleuca
ENSCAPG00000011647	RTCB	99	86.310	ENSACIG00000009083	rtcb	99	86.310	Amphilophus_citrinellus
ENSCAPG00000011647	RTCB	96	94.340	ENSAOCG00000005662	rtcb	100	95.217	Amphiprion_ocellaris
ENSCAPG00000011647	RTCB	96	90.928	ENSAPEG00000024653	rtcb	97	90.928	Amphiprion_percula
ENSCAPG00000011647	RTCB	96	94.340	ENSAPEG00000024701	rtcb	94	94.340	Amphiprion_percula
ENSCAPG00000011647	RTCB	96	94.549	ENSATEG00000000618	rtcb	94	94.549	Anabas_testudineus
ENSCAPG00000011647	RTCB	96	96.849	ENSACAG00000014817	RTCB	92	96.849	Anolis_carolinensis
ENSCAPG00000011647	RTCB	68	97.222	ENSANAG00000023724	-	93	60.460	Aotus_nancymaae
ENSCAPG00000011647	RTCB	96	83.438	ENSANAG00000018191	-	86	83.438	Aotus_nancymaae
ENSCAPG00000011647	RTCB	96	93.291	ENSACLG00000008367	rtcb	100	94.130	Astatotilapia_calliptera
ENSCAPG00000011647	RTCB	96	94.130	ENSAMXG00000042320	rtcb	94	94.130	Astyanax_mexicanus
ENSCAPG00000011647	RTCB	96	98.952	ENSBTAG00000011070	RTCB	94	98.952	Bos_taurus
ENSCAPG00000011647	RTCB	96	74.895	WBGene00008877	rtcb-1	94	74.895	Caenorhabditis_elegans
ENSCAPG00000011647	RTCB	96	98.952	ENSCJAG00000006128	RTCB	94	98.952	Callithrix_jacchus
ENSCAPG00000011647	RTCB	96	98.952	ENSCAFG00000001785	RTCB	94	98.952	Canis_familiaris
ENSCAPG00000011647	RTCB	96	94.340	ENSCAFG00000010789	-	94	94.340	Canis_familiaris
ENSCAPG00000011647	RTCB	83	94.903	ENSCAFG00020018953	-	93	94.903	Canis_lupus_dingo
ENSCAPG00000011647	RTCB	96	98.952	ENSCAFG00020004890	-	94	98.952	Canis_lupus_dingo
ENSCAPG00000011647	RTCB	96	98.952	ENSCHIG00000027009	-	94	98.952	Capra_hircus
ENSCAPG00000011647	RTCB	96	98.952	ENSTSYG00000012320	RTCB	94	98.952	Carlito_syrichta
ENSCAPG00000011647	RTCB	96	98.952	ENSCCAG00000000618	RTCB	94	98.952	Cebus_capucinus
ENSCAPG00000011647	RTCB	96	98.952	ENSCATG00000033424	RTCB	94	98.952	Cercocebus_atys
ENSCAPG00000011647	RTCB	99	94.643	ENSCLAG00000007997	RTCB	99	94.643	Chinchilla_lanigera
ENSCAPG00000011647	RTCB	96	98.952	ENSCSAG00000008351	RTCB	94	98.952	Chlorocebus_sabaeus
ENSCAPG00000011647	RTCB	96	83.648	ENSCHOG00000009123	RTCB	94	83.648	Choloepus_hoffmanni
ENSCAPG00000011647	RTCB	96	97.890	ENSCPBG00000023184	RTCB	94	97.890	Chrysemys_picta_bellii
ENSCAPG00000011647	RTCB	96	83.648	ENSCING00000003830	-	94	83.648	Ciona_intestinalis
ENSCAPG00000011647	RTCB	96	83.857	ENSCSAVG00000008124	-	100	81.093	Ciona_savignyi
ENSCAPG00000011647	RTCB	96	94.969	ENSCANG00000001891	RTCB	94	94.969	Colobus_angolensis_palliatus
ENSCAPG00000011647	RTCB	96	98.742	ENSCGRG00001011173	Rtcb	94	98.742	Cricetulus_griseus_chok1gshd
ENSCAPG00000011647	RTCB	95	99.363	ENSCGRG00000009587	-	96	99.363	Cricetulus_griseus_crigri
ENSCAPG00000011647	RTCB	96	93.501	ENSCSEG00000003986	rtcb	94	93.501	Cynoglossus_semilaevis
ENSCAPG00000011647	RTCB	84	93.029	ENSCVAG00000000569	rtcb	95	93.029	Cyprinodon_variegatus
ENSCAPG00000011647	RTCB	96	94.130	ENSDARG00000101047	rtcb	94	94.130	Danio_rerio
ENSCAPG00000011647	RTCB	76	96.306	ENSDNOG00000012425	RTCB	93	96.306	Dasypus_novemcinctus
ENSCAPG00000011647	RTCB	96	98.532	ENSDORG00000010855	Rtcb	94	98.532	Dipodomys_ordii
ENSCAPG00000011647	RTCB	96	86.287	FBgn0032781	RtcB	94	86.287	Drosophila_melanogaster
ENSCAPG00000011647	RTCB	96	92.034	ENSETEG00000001988	RTCB	94	92.034	Echinops_telfairi
ENSCAPG00000011647	RTCB	99	82.341	ENSEBUG00000014235	rtcb	99	82.341	Eptatretus_burgeri
ENSCAPG00000011647	RTCB	96	99.161	ENSEASG00005019059	RTCB	94	99.161	Equus_asinus_asinus
ENSCAPG00000011647	RTCB	96	99.161	ENSECAG00000023998	RTCB	94	99.161	Equus_caballus
ENSCAPG00000011647	RTCB	90	89.933	ENSEEUG00000006251	RTCB	100	89.933	Erinaceus_europaeus
ENSCAPG00000011647	RTCB	96	82.036	ENSELUG00000009275	rtcb	95	82.036	Esox_lucius
ENSCAPG00000011647	RTCB	96	99.161	ENSFCAG00000026480	RTCB	94	99.161	Felis_catus
ENSCAPG00000011647	RTCB	96	97.904	ENSFALG00000013334	RTCB	94	97.904	Ficedula_albicollis
ENSCAPG00000011647	RTCB	96	99.161	ENSFDAG00000018150	RTCB	94	99.161	Fukomys_damarensis
ENSCAPG00000011647	RTCB	96	94.340	ENSFHEG00000009595	rtcb	94	94.340	Fundulus_heteroclitus
ENSCAPG00000011647	RTCB	96	92.243	ENSGMOG00000018882	rtcb	94	92.243	Gadus_morhua
ENSCAPG00000011647	RTCB	96	97.890	ENSGALG00000012611	RTCB	94	97.890	Gallus_gallus
ENSCAPG00000011647	RTCB	96	94.759	ENSGAFG00000004198	rtcb	94	94.759	Gambusia_affinis
ENSCAPG00000011647	RTCB	96	93.920	ENSGACG00000000586	rtcb	94	93.920	Gasterosteus_aculeatus
ENSCAPG00000011647	RTCB	93	92.751	ENSGAGG00000019133	RTCB	98	92.751	Gopherus_agassizii
ENSCAPG00000011647	RTCB	96	99.161	ENSGGOG00000011402	RTCB	94	99.161	Gorilla_gorilla
ENSCAPG00000011647	RTCB	96	93.291	ENSHBUG00000020571	rtcb	94	93.291	Haplochromis_burtoni
ENSCAPG00000011647	RTCB	96	99.161	ENSHGLG00000004492	RTCB	94	99.161	Heterocephalus_glaber_female
ENSCAPG00000011647	RTCB	95	70.763	ENSHGLG00000001066	-	99	70.763	Heterocephalus_glaber_female
ENSCAPG00000011647	RTCB	96	99.161	ENSHGLG00100008965	RTCB	94	99.161	Heterocephalus_glaber_male
ENSCAPG00000011647	RTCB	96	91.441	ENSHCOG00000006450	rtcb	94	91.441	Hippocampus_comes
ENSCAPG00000011647	RTCB	96	94.759	ENSIPUG00000015443	rtcb	94	94.759	Ictalurus_punctatus
ENSCAPG00000011647	RTCB	96	98.952	ENSSTOG00000003878	RTCB	94	98.952	Ictidomys_tridecemlineatus
ENSCAPG00000011647	RTCB	96	98.532	ENSJJAG00000010667	Rtcb	94	98.532	Jaculus_jaculus
ENSCAPG00000011647	RTCB	96	94.549	ENSKMAG00000013178	rtcb	94	94.549	Kryptolebias_marmoratus
ENSCAPG00000011647	RTCB	96	94.130	ENSLBEG00000010566	RTCB	94	94.130	Labrus_bergylta
ENSCAPG00000011647	RTCB	96	93.082	ENSLBEG00000000214	rtcb	94	93.082	Labrus_bergylta
ENSCAPG00000011647	RTCB	96	95.798	ENSLACG00000013033	RTCB	94	95.798	Latimeria_chalumnae
ENSCAPG00000011647	RTCB	96	94.759	ENSLOCG00000016515	rtcb	94	94.759	Lepisosteus_oculatus
ENSCAPG00000011647	RTCB	96	98.323	ENSLAFG00000002082	RTCB	94	98.323	Loxodonta_africana
ENSCAPG00000011647	RTCB	96	98.952	ENSMFAG00000034419	RTCB	94	98.952	Macaca_fascicularis
ENSCAPG00000011647	RTCB	96	98.952	ENSMMUG00000006720	RTCB	94	98.952	Macaca_mulatta
ENSCAPG00000011647	RTCB	96	98.952	ENSMNEG00000040669	RTCB	94	98.952	Macaca_nemestrina
ENSCAPG00000011647	RTCB	96	98.952	ENSMLEG00000040505	RTCB	94	98.952	Mandrillus_leucophaeus
ENSCAPG00000011647	RTCB	96	94.549	ENSMAMG00000020676	rtcb	94	94.549	Mastacembelus_armatus
ENSCAPG00000011647	RTCB	96	93.882	ENSMZEG00005018942	rtcb	94	93.291	Maylandia_zebra
ENSCAPG00000011647	RTCB	96	97.479	ENSMGAG00000012805	RTCB	94	97.479	Meleagris_gallopavo
ENSCAPG00000011647	RTCB	61	100.000	ENSMAUG00000008301	Rtcb	100	100.000	Mesocricetus_auratus
ENSCAPG00000011647	RTCB	96	99.161	ENSMICG00000013303	-	94	99.161	Microcebus_murinus
ENSCAPG00000011647	RTCB	96	80.713	ENSMICG00000036677	-	94	80.713	Microcebus_murinus
ENSCAPG00000011647	RTCB	96	98.742	ENSMOCG00000002440	Rtcb	94	98.742	Microtus_ochrogaster
ENSCAPG00000011647	RTCB	96	94.340	ENSMMOG00000005987	rtcb	94	94.340	Mola_mola
ENSCAPG00000011647	RTCB	96	98.532	ENSMODG00000001414	RTCB	94	98.532	Monodelphis_domestica
ENSCAPG00000011647	RTCB	96	94.340	ENSMALG00000007603	rtcb	94	94.340	Monopterus_albus
ENSCAPG00000011647	RTCB	96	98.952	MGP_CAROLIEiJ_G0015689	Rtcb	94	98.952	Mus_caroli
ENSCAPG00000011647	RTCB	96	98.952	ENSMUSG00000001783	Rtcb	94	98.952	Mus_musculus
ENSCAPG00000011647	RTCB	96	98.952	MGP_PahariEiJ_G0031396	Rtcb	94	98.952	Mus_pahari
ENSCAPG00000011647	RTCB	96	98.952	MGP_SPRETEiJ_G0016507	Rtcb	94	98.952	Mus_spretus
ENSCAPG00000011647	RTCB	96	98.952	ENSMPUG00000012285	RTCB	94	98.952	Mustela_putorius_furo
ENSCAPG00000011647	RTCB	96	96.646	ENSMLUG00000007803	RTCB	94	96.646	Myotis_lucifugus
ENSCAPG00000011647	RTCB	70	100.000	ENSNGAG00000005093	Rtcb	92	100.000	Nannospalax_galili
ENSCAPG00000011647	RTCB	96	93.501	ENSNBRG00000017202	rtcb	94	93.501	Neolamprologus_brichardi
ENSCAPG00000011647	RTCB	96	99.161	ENSNLEG00000004960	RTCB	94	99.161	Nomascus_leucogenys
ENSCAPG00000011647	RTCB	96	71.488	ENSMEUG00000007809	-	94	71.488	Notamacropus_eugenii
ENSCAPG00000011647	RTCB	69	100.000	ENSOPRG00000003488	RTCB	73	100.000	Ochotona_princeps
ENSCAPG00000011647	RTCB	83	100.000	ENSODEG00000013033	-	100	100.000	Octodon_degus
ENSCAPG00000011647	RTCB	95	65.042	ENSODEG00000005042	-	92	65.042	Octodon_degus
ENSCAPG00000011647	RTCB	96	94.340	ENSONIG00000007474	rtcb	94	94.340	Oreochromis_niloticus
ENSCAPG00000011647	RTCB	96	98.742	ENSOANG00000005524	RTCB	94	98.742	Ornithorhynchus_anatinus
ENSCAPG00000011647	RTCB	89	98.643	ENSOCUG00000008270	RTCB	90	98.643	Oryctolagus_cuniculus
ENSCAPG00000011647	RTCB	96	94.130	ENSORLG00000020093	rtcb	94	94.130	Oryzias_latipes
ENSCAPG00000011647	RTCB	96	94.726	ENSORLG00020003706	rtcb	99	94.726	Oryzias_latipes_hni
ENSCAPG00000011647	RTCB	96	94.340	ENSORLG00015002968	rtcb	94	94.340	Oryzias_latipes_hsok
ENSCAPG00000011647	RTCB	96	93.711	ENSOMEG00000021278	rtcb	94	93.711	Oryzias_melastigma
ENSCAPG00000011647	RTCB	96	98.532	ENSOGAG00000001425	RTCB	94	98.532	Otolemur_garnettii
ENSCAPG00000011647	RTCB	96	98.952	ENSOARG00000018008	RTCB	94	98.952	Ovis_aries
ENSCAPG00000011647	RTCB	96	99.161	ENSPPAG00000028667	RTCB	94	99.161	Pan_paniscus
ENSCAPG00000011647	RTCB	96	99.161	ENSPPRG00000004038	RTCB	94	99.161	Panthera_pardus
ENSCAPG00000011647	RTCB	96	96.203	ENSPTIG00000020499	RTCB	97	96.203	Panthera_tigris_altaica
ENSCAPG00000011647	RTCB	96	99.161	ENSPTRG00000014287	RTCB	94	99.161	Pan_troglodytes
ENSCAPG00000011647	RTCB	96	98.952	ENSPANG00000016035	RTCB	94	98.952	Papio_anubis
ENSCAPG00000011647	RTCB	96	93.501	ENSPKIG00000001881	rtcb	94	93.501	Paramormyrops_kingsleyae
ENSCAPG00000011647	RTCB	93	98.261	ENSPSIG00000011690	RTCB	100	98.261	Pelodiscus_sinensis
ENSCAPG00000011647	RTCB	96	94.340	ENSPMGG00000016672	rtcb	94	94.340	Periophthalmus_magnuspinnatus
ENSCAPG00000011647	RTCB	96	98.952	ENSPEMG00000019548	Rtcb	94	98.952	Peromyscus_maniculatus_bairdii
ENSCAPG00000011647	RTCB	96	91.405	ENSPMAG00000005657	rtcb	94	91.405	Petromyzon_marinus
ENSCAPG00000011647	RTCB	96	98.952	ENSPCIG00000009467	RTCB	94	98.952	Phascolarctos_cinereus
ENSCAPG00000011647	RTCB	96	95.178	ENSPFOG00000003058	rtcb	94	95.178	Poecilia_formosa
ENSCAPG00000011647	RTCB	96	94.969	ENSPLAG00000017663	rtcb	94	94.969	Poecilia_latipinna
ENSCAPG00000011647	RTCB	96	95.178	ENSPMEG00000006227	rtcb	94	95.178	Poecilia_mexicana
ENSCAPG00000011647	RTCB	96	94.969	ENSPREG00000018467	rtcb	94	94.969	Poecilia_reticulata
ENSCAPG00000011647	RTCB	96	99.161	ENSPPYG00000011752	RTCB	94	99.161	Pongo_abelii
ENSCAPG00000011647	RTCB	89	79.730	ENSPCAG00000013641	RTCB	94	79.730	Procavia_capensis
ENSCAPG00000011647	RTCB	96	99.161	ENSPCOG00000017243	RTCB	94	99.161	Propithecus_coquereli
ENSCAPG00000011647	RTCB	89	98.190	ENSPVAG00000002380	RTCB	94	98.190	Pteropus_vampyrus
ENSCAPG00000011647	RTCB	96	93.291	ENSPNYG00000022760	rtcb	94	93.291	Pundamilia_nyererei
ENSCAPG00000011647	RTCB	96	94.969	ENSPNAG00000009209	rtcb	94	94.969	Pygocentrus_nattereri
ENSCAPG00000011647	RTCB	96	98.952	ENSRNOG00000004813	Rtcb	94	98.952	Rattus_norvegicus
ENSCAPG00000011647	RTCB	96	89.540	ENSRBIG00000042090	RTCB	94	89.540	Rhinopithecus_bieti
ENSCAPG00000011647	RTCB	96	93.711	ENSSBOG00000020085	-	94	93.711	Saimiri_boliviensis_boliviensis
ENSCAPG00000011647	RTCB	96	99.367	ENSSHAG00000016277	RTCB	100	99.367	Sarcophilus_harrisii
ENSCAPG00000011647	RTCB	96	93.711	ENSSFOG00015011572	RTCB	94	93.711	Scleropages_formosus
ENSCAPG00000011647	RTCB	96	93.082	ENSSFOG00015000763	rtcb	94	93.082	Scleropages_formosus
ENSCAPG00000011647	RTCB	96	90.776	ENSSMAG00000005096	rtcb	94	90.776	Scophthalmus_maximus
ENSCAPG00000011647	RTCB	96	93.711	ENSSDUG00000012605	rtcb	94	93.711	Seriola_dumerili
ENSCAPG00000011647	RTCB	96	93.711	ENSSLDG00000019458	rtcb	94	93.711	Seriola_lalandi_dorsalis
ENSCAPG00000011647	RTCB	67	100.000	ENSSARG00000004799	-	70	100.000	Sorex_araneus
ENSCAPG00000011647	RTCB	96	96.835	ENSSPUG00000012814	RTCB	94	96.835	Sphenodon_punctatus
ENSCAPG00000011647	RTCB	96	94.340	ENSSPAG00000004623	rtcb	94	94.340	Stegastes_partitus
ENSCAPG00000011647	RTCB	96	99.161	ENSSSCG00000000158	RTCB	94	99.161	Sus_scrofa
ENSCAPG00000011647	RTCB	96	97.904	ENSTGUG00000010947	RTCB	94	97.904	Taeniopygia_guttata
ENSCAPG00000011647	RTCB	93	95.217	ENSTRUG00000009880	rtcb	100	95.217	Takifugu_rubripes
ENSCAPG00000011647	RTCB	96	93.291	ENSTNIG00000002484	rtcb	94	93.291	Tetraodon_nigroviridis
ENSCAPG00000011647	RTCB	90	90.380	ENSTBEG00000004418	RTCB	88	90.380	Tupaia_belangeri
ENSCAPG00000011647	RTCB	89	98.416	ENSTTRG00000006417	RTCB	94	98.416	Tursiops_truncatus
ENSCAPG00000011647	RTCB	96	98.952	ENSUAMG00000022792	RTCB	94	98.952	Ursus_americanus
ENSCAPG00000011647	RTCB	96	98.952	ENSUMAG00000017225	RTCB	94	98.952	Ursus_maritimus
ENSCAPG00000011647	RTCB	96	98.952	ENSVPAG00000005375	RTCB	94	98.952	Vicugna_pacos
ENSCAPG00000011647	RTCB	96	98.952	ENSVVUG00000023408	RTCB	100	99.509	Vulpes_vulpes
ENSCAPG00000011647	RTCB	96	94.549	ENSXETG00000011523	rtcb	94	94.549	Xenopus_tropicalis
ENSCAPG00000011647	RTCB	96	95.378	ENSXMAG00000002855	rtcb	94	94.969	Xiphophorus_maculatus