EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAPG00000011772 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 1076 bases
Position: chrAVPZ01000622.1:9131805-9132880
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000010502	Paf67	PF10255.9	2.9e-117	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000014235	-	1059	-	ENSCAPP00000010502	352 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000011772's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000011772's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAPG00000011772	-	88	91.875	ENSCAPG00000010140	-	73	91.875
ENSCAPG00000011772	-	88	85.759	ENSCAPG00000012468	-	57	85.759

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000011772	-	88	91.875	ENSG00000100129	EIF3L	69	91.875	Homo_sapiens
ENSCAPG00000011772	-	88	87.812	ENSAPOG00000020695	eif3s6ip	56	87.812	Acanthochromis_polyacanthus
ENSCAPG00000011772	-	88	91.875	ENSAMEG00000010267	EIF3L	53	91.875	Ailuropoda_melanoleuca
ENSCAPG00000011772	-	88	87.812	ENSACIG00000004431	eif3s6ip	56	87.812	Amphilophus_citrinellus
ENSCAPG00000011772	-	88	87.812	ENSAOCG00000021732	eif3s6ip	56	87.812	Amphiprion_ocellaris
ENSCAPG00000011772	-	88	87.812	ENSAPEG00000024616	eif3s6ip	56	87.812	Amphiprion_percula
ENSCAPG00000011772	-	88	87.812	ENSATEG00000013143	eif3s6ip	56	87.812	Anabas_testudineus
ENSCAPG00000011772	-	88	90.938	ENSAPLG00000015281	EIF3L	59	90.938	Anas_platyrhynchos
ENSCAPG00000011772	-	88	90.625	ENSACAG00000015371	EIF3L	58	90.625	Anolis_carolinensis
ENSCAPG00000011772	-	88	85.312	ENSANAG00000028227	-	68	84.688	Aotus_nancymaae
ENSCAPG00000011772	-	88	69.062	ENSANAG00000020611	-	55	69.062	Aotus_nancymaae
ENSCAPG00000011772	-	88	87.812	ENSACLG00000021594	eif3s6ip	56	87.812	Astatotilapia_calliptera
ENSCAPG00000011772	-	88	87.500	ENSAMXG00000003073	eif3s6ip	56	87.500	Astyanax_mexicanus
ENSCAPG00000011772	-	88	91.875	ENSBTAG00000010790	EIF3L	57	91.875	Bos_taurus
ENSCAPG00000011772	-	87	42.368	WBGene00015920	eif-3.L	65	42.368	Caenorhabditis_elegans
ENSCAPG00000011772	-	88	91.562	ENSCJAG00000038841	-	83	91.562	Callithrix_jacchus
ENSCAPG00000011772	-	88	91.875	ENSCAFG00000001443	EIF3L	62	91.875	Canis_familiaris
ENSCAPG00000011772	-	88	91.875	ENSCAFG00020003701	-	54	91.875	Canis_lupus_dingo
ENSCAPG00000011772	-	65	89.583	ENSCAFG00020021941	-	52	88.525	Canis_lupus_dingo
ENSCAPG00000011772	-	88	90.312	ENSCAFG00020004232	-	57	90.312	Canis_lupus_dingo
ENSCAPG00000011772	-	88	91.875	ENSCAFG00020003202	-	52	91.875	Canis_lupus_dingo
ENSCAPG00000011772	-	88	91.875	ENSCHIG00000014325	EIF3L	57	91.875	Capra_hircus
ENSCAPG00000011772	-	88	91.875	ENSTSYG00000002006	-	77	91.875	Carlito_syrichta
ENSCAPG00000011772	-	83	74.172	ENSTSYG00000026953	-	90	74.172	Carlito_syrichta
ENSCAPG00000011772	-	100	97.443	ENSCPOG00000035371	-	100	97.443	Cavia_porcellus
ENSCAPG00000011772	-	88	91.562	ENSCPOG00000005885	-	57	91.562	Cavia_porcellus
ENSCAPG00000011772	-	88	78.165	ENSCPOG00000033219	-	85	78.165	Cavia_porcellus
ENSCAPG00000011772	-	88	91.562	ENSCCAG00000023543	-	62	91.562	Cebus_capucinus
ENSCAPG00000011772	-	88	91.250	ENSCCAG00000034054	-	54	91.250	Cebus_capucinus
ENSCAPG00000011772	-	88	91.875	ENSCATG00000037073	EIF3L	69	91.875	Cercocebus_atys
ENSCAPG00000011772	-	88	91.875	ENSCLAG00000016779	EIF3L	57	91.875	Chinchilla_lanigera
ENSCAPG00000011772	-	75	91.606	ENSCSAG00000006903	EIF3L	91	91.606	Chlorocebus_sabaeus
ENSCAPG00000011772	-	88	91.875	ENSCHOG00000009237	EIF3L	53	91.875	Choloepus_hoffmanni
ENSCAPG00000011772	-	88	91.250	ENSCPBG00000023050	EIF3L	57	91.250	Chrysemys_picta_bellii
ENSCAPG00000011772	-	88	56.575	ENSCING00000014830	-	64	56.575	Ciona_intestinalis
ENSCAPG00000011772	-	88	55.963	ENSCSAVG00000009201	-	60	55.963	Ciona_savignyi
ENSCAPG00000011772	-	88	91.875	ENSCANG00000035707	EIF3L	58	91.875	Colobus_angolensis_palliatus
ENSCAPG00000011772	-	88	72.812	ENSCANG00000018914	-	83	72.812	Colobus_angolensis_palliatus
ENSCAPG00000011772	-	88	91.562	ENSCGRG00001020655	Eif3l	57	91.562	Cricetulus_griseus_chok1gshd
ENSCAPG00000011772	-	88	91.562	ENSCGRG00000014127	Eif3l	57	91.562	Cricetulus_griseus_crigri
ENSCAPG00000011772	-	88	87.812	ENSCSEG00000017526	eif3s6ip	56	87.812	Cynoglossus_semilaevis
ENSCAPG00000011772	-	88	87.812	ENSCVAG00000001269	eif3s6ip	56	87.812	Cyprinodon_variegatus
ENSCAPG00000011772	-	88	87.500	ENSDARG00000101082	eif3s6ip	56	87.500	Danio_rerio
ENSCAPG00000011772	-	80	91.096	ENSDNOG00000047382	EIF3L	89	91.096	Dasypus_novemcinctus
ENSCAPG00000011772	-	88	91.875	ENSDORG00000009478	Eif3l	84	91.875	Dipodomys_ordii
ENSCAPG00000011772	-	88	55.828	FBgn0036258	eIF3l	60	55.828	Drosophila_melanogaster
ENSCAPG00000011772	-	88	67.601	ENSETEG00000006051	EIF3L	53	67.601	Echinops_telfairi
ENSCAPG00000011772	-	88	74.688	ENSEBUG00000003610	eif3s6ip	54	74.688	Eptatretus_burgeri
ENSCAPG00000011772	-	88	91.875	ENSEASG00005018809	EIF3L	71	91.875	Equus_asinus_asinus
ENSCAPG00000011772	-	88	91.875	ENSECAG00000015150	EIF3L	58	91.803	Equus_caballus
ENSCAPG00000011772	-	88	91.562	ENSEEUG00000004697	EIF3L	58	91.562	Erinaceus_europaeus
ENSCAPG00000011772	-	88	87.812	ENSELUG00000010629	eif3s6ip	55	87.812	Esox_lucius
ENSCAPG00000011772	-	88	91.562	ENSFCAG00000028972	EIF3L	69	91.562	Felis_catus
ENSCAPG00000011772	-	88	90.938	ENSFALG00000012768	EIF3L	57	90.938	Ficedula_albicollis
ENSCAPG00000011772	-	88	91.875	ENSFDAG00000012066	-	57	91.875	Fukomys_damarensis
ENSCAPG00000011772	-	88	87.812	ENSFHEG00000019137	eif3s6ip	56	87.812	Fundulus_heteroclitus
ENSCAPG00000011772	-	88	86.875	ENSGMOG00000008725	eif3s6ip	57	86.875	Gadus_morhua
ENSCAPG00000011772	-	88	90.938	ENSGALG00000012296	EIF3L	57	90.938	Gallus_gallus
ENSCAPG00000011772	-	88	87.500	ENSGAFG00000017801	eif3s6ip	56	87.829	Gambusia_affinis
ENSCAPG00000011772	-	88	86.250	ENSGACG00000003516	eif3s6ip	55	86.250	Gasterosteus_aculeatus
ENSCAPG00000011772	-	88	91.250	ENSGAGG00000021753	EIF3L	57	91.250	Gopherus_agassizii
ENSCAPG00000011772	-	88	91.875	ENSGGOG00000027682	EIF3L	69	91.875	Gorilla_gorilla
ENSCAPG00000011772	-	88	87.812	ENSHBUG00000010950	eif3s6ip	56	87.812	Haplochromis_burtoni
ENSCAPG00000011772	-	88	91.875	ENSHGLG00000010378	EIF3L	57	91.875	Heterocephalus_glaber_female
ENSCAPG00000011772	-	88	91.875	ENSHGLG00100017773	EIF3L	57	91.875	Heterocephalus_glaber_male
ENSCAPG00000011772	-	88	87.500	ENSHCOG00000004022	eif3s6ip	56	87.500	Hippocampus_comes
ENSCAPG00000011772	-	88	87.500	ENSIPUG00000019522	eif3l	56	87.500	Ictalurus_punctatus
ENSCAPG00000011772	-	88	91.562	ENSJJAG00000009583	Eif3l	84	91.562	Jaculus_jaculus
ENSCAPG00000011772	-	88	87.188	ENSKMAG00000008795	eif3s6ip	58	87.188	Kryptolebias_marmoratus
ENSCAPG00000011772	-	88	87.500	ENSLBEG00000013052	eif3s6ip	55	87.500	Labrus_bergylta
ENSCAPG00000011772	-	96	82.471	ENSLACG00000002387	EIF3L	61	82.471	Latimeria_chalumnae
ENSCAPG00000011772	-	88	87.188	ENSLOCG00000016195	eif3s6ip	55	87.188	Lepisosteus_oculatus
ENSCAPG00000011772	-	88	91.875	ENSLAFG00000001516	EIF3L	57	91.875	Loxodonta_africana
ENSCAPG00000011772	-	88	91.875	ENSMFAG00000040574	EIF3L	69	91.875	Macaca_fascicularis
ENSCAPG00000011772	-	88	91.875	ENSMMUG00000019785	EIF3L	69	91.875	Macaca_mulatta
ENSCAPG00000011772	-	88	91.875	ENSMNEG00000030385	EIF3L	69	91.875	Macaca_nemestrina
ENSCAPG00000011772	-	88	74.204	ENSMNEG00000033174	-	83	74.204	Macaca_nemestrina
ENSCAPG00000011772	-	88	91.875	ENSMLEG00000040794	EIF3L	69	91.875	Mandrillus_leucophaeus
ENSCAPG00000011772	-	88	87.812	ENSMAMG00000015713	eif3s6ip	56	87.812	Mastacembelus_armatus
ENSCAPG00000011772	-	88	87.812	ENSMZEG00005010929	eif3s6ip	56	87.812	Maylandia_zebra
ENSCAPG00000011772	-	88	90.938	ENSMGAG00000012482	EIF3L	56	90.938	Meleagris_gallopavo
ENSCAPG00000011772	-	88	91.562	ENSMAUG00000003954	Eif3l	57	91.562	Mesocricetus_auratus
ENSCAPG00000011772	-	88	89.571	ENSMICG00000013090	-	83	89.571	Microcebus_murinus
ENSCAPG00000011772	-	88	90.625	ENSMICG00000035434	-	81	90.625	Microcebus_murinus
ENSCAPG00000011772	-	88	91.562	ENSMOCG00000012256	Eif3l	57	91.562	Microtus_ochrogaster
ENSCAPG00000011772	-	84	87.829	ENSMMOG00000008532	eif3s6ip	58	87.829	Mola_mola
ENSCAPG00000011772	-	88	91.250	ENSMODG00000019068	EIF3L	57	91.250	Monodelphis_domestica
ENSCAPG00000011772	-	88	87.812	ENSMALG00000007109	eif3s6ip	56	87.812	Monopterus_albus
ENSCAPG00000011772	-	88	91.562	MGP_CAROLIEiJ_G0020003	Eif3l	57	91.562	Mus_caroli
ENSCAPG00000011772	-	88	91.562	ENSMUSG00000033047	Eif3l	57	91.562	Mus_musculus
ENSCAPG00000011772	-	88	91.562	MGP_PahariEiJ_G0020005	Eif3l	57	91.562	Mus_pahari
ENSCAPG00000011772	-	88	91.562	MGP_SPRETEiJ_G0020901	Eif3l	57	91.562	Mus_spretus
ENSCAPG00000011772	-	88	91.875	ENSMPUG00000012918	EIF3L	53	91.875	Mustela_putorius_furo
ENSCAPG00000011772	-	88	91.875	ENSMLUG00000028617	EIF3L	53	91.875	Myotis_lucifugus
ENSCAPG00000011772	-	88	91.875	ENSNGAG00000015312	Eif3l	57	91.875	Nannospalax_galili
ENSCAPG00000011772	-	88	87.812	ENSNBRG00000016162	eif3s6ip	56	87.812	Neolamprologus_brichardi
ENSCAPG00000011772	-	88	91.875	ENSNLEG00000014876	EIF3L	69	91.875	Nomascus_leucogenys
ENSCAPG00000011772	-	67	84.490	ENSNLEG00000033451	-	80	84.490	Nomascus_leucogenys
ENSCAPG00000011772	-	88	72.500	ENSNLEG00000034940	-	87	72.500	Nomascus_leucogenys
ENSCAPG00000011772	-	88	91.875	ENSOPRG00000013475	EIF3L	53	91.875	Ochotona_princeps
ENSCAPG00000011772	-	90	62.422	ENSODEG00000000593	-	58	62.733	Octodon_degus
ENSCAPG00000011772	-	88	91.875	ENSODEG00000012441	EIF3L	74	91.875	Octodon_degus
ENSCAPG00000011772	-	88	87.812	ENSONIG00000010235	eif3s6ip	56	87.812	Oreochromis_niloticus
ENSCAPG00000011772	-	88	91.562	ENSOANG00000004150	EIF3L	57	91.562	Ornithorhynchus_anatinus
ENSCAPG00000011772	-	88	91.562	ENSOCUG00000000941	EIF3L	53	91.562	Oryctolagus_cuniculus
ENSCAPG00000011772	-	88	87.500	ENSORLG00000013480	eif3s6ip	83	87.500	Oryzias_latipes
ENSCAPG00000011772	-	88	87.500	ENSORLG00020005796	eif3s6ip	55	87.500	Oryzias_latipes_hni
ENSCAPG00000011772	-	88	87.500	ENSORLG00015021045	eif3s6ip	55	87.500	Oryzias_latipes_hsok
ENSCAPG00000011772	-	88	87.500	ENSOMEG00000017565	eif3s6ip	56	87.500	Oryzias_melastigma
ENSCAPG00000011772	-	88	91.250	ENSOGAG00000029444	-	68	91.250	Otolemur_garnettii
ENSCAPG00000011772	-	88	88.125	ENSOGAG00000026518	-	61	88.125	Otolemur_garnettii
ENSCAPG00000011772	-	88	90.625	ENSOGAG00000030790	-	68	90.625	Otolemur_garnettii
ENSCAPG00000011772	-	88	91.875	ENSOARG00000014439	EIF3L	55	91.875	Ovis_aries
ENSCAPG00000011772	-	88	91.875	ENSPPAG00000035942	EIF3L	69	91.875	Pan_paniscus
ENSCAPG00000011772	-	88	91.562	ENSPPRG00000016342	EIF3L	69	91.562	Panthera_pardus
ENSCAPG00000011772	-	88	91.562	ENSPTIG00000013809	EIF3L	69	91.562	Panthera_tigris_altaica
ENSCAPG00000011772	-	88	91.875	ENSPTRG00000014352	EIF3L	69	91.875	Pan_troglodytes
ENSCAPG00000011772	-	67	85.714	ENSPTRG00000043977	-	80	85.714	Pan_troglodytes
ENSCAPG00000011772	-	88	91.875	ENSPANG00000020963	EIF3L	69	91.875	Papio_anubis
ENSCAPG00000011772	-	91	84.478	ENSPKIG00000016998	eif3s6ip	64	84.478	Paramormyrops_kingsleyae
ENSCAPG00000011772	-	75	90.876	ENSPSIG00000013455	-	92	90.876	Pelodiscus_sinensis
ENSCAPG00000011772	-	88	87.812	ENSPMGG00000001439	eif3s6ip	56	87.812	Periophthalmus_magnuspinnatus
ENSCAPG00000011772	-	88	91.562	ENSPEMG00000009678	Eif3l	57	91.562	Peromyscus_maniculatus_bairdii
ENSCAPG00000011772	-	80	78.007	ENSPMAG00000005390	eif3s6ip	92	78.007	Petromyzon_marinus
ENSCAPG00000011772	-	75	90.876	ENSPCIG00000002847	-	66	90.876	Phascolarctos_cinereus
ENSCAPG00000011772	-	88	87.500	ENSPFOG00000013709	eif3s6ip	57	87.500	Poecilia_formosa
ENSCAPG00000011772	-	88	87.500	ENSPLAG00000021721	eif3s6ip	57	87.500	Poecilia_latipinna
ENSCAPG00000011772	-	88	87.500	ENSPMEG00000020657	eif3s6ip	57	87.500	Poecilia_mexicana
ENSCAPG00000011772	-	88	87.500	ENSPREG00000001257	eif3s6ip	57	87.500	Poecilia_reticulata
ENSCAPG00000011772	-	88	90.000	ENSPCAG00000000182	EIF3L	54	90.000	Procavia_capensis
ENSCAPG00000011772	-	88	91.875	ENSPCOG00000018873	EIF3L	69	91.875	Propithecus_coquereli
ENSCAPG00000011772	-	88	91.875	ENSPVAG00000010103	EIF3L	53	91.875	Pteropus_vampyrus
ENSCAPG00000011772	-	88	87.812	ENSPNYG00000012524	eif3s6ip	56	87.812	Pundamilia_nyererei
ENSCAPG00000011772	-	88	87.500	ENSPNAG00000015976	eif3s6ip	58	87.500	Pygocentrus_nattereri
ENSCAPG00000011772	-	88	91.562	ENSRNOG00000011020	Eif3l	84	91.562	Rattus_norvegicus
ENSCAPG00000011772	-	84	73.754	ENSRBIG00000041537	EIF3L	65	73.422	Rhinopithecus_bieti
ENSCAPG00000011772	-	88	91.875	ENSRROG00000043597	EIF3L	69	91.875	Rhinopithecus_roxellana
ENSCAPG00000011772	-	88	91.562	ENSSBOG00000031850	EIF3L	84	91.562	Saimiri_boliviensis_boliviensis
ENSCAPG00000011772	-	88	91.562	ENSSHAG00000008892	EIF3L	57	91.562	Sarcophilus_harrisii
ENSCAPG00000011772	-	71	86.873	ENSSFOG00015003021	eif3s6ip	54	86.873	Scleropages_formosus
ENSCAPG00000011772	-	88	87.188	ENSSMAG00000012105	eif3s6ip	56	87.188	Scophthalmus_maximus
ENSCAPG00000011772	-	88	87.812	ENSSDUG00000004810	eif3s6ip	56	87.812	Seriola_dumerili
ENSCAPG00000011772	-	88	87.812	ENSSLDG00000023604	eif3s6ip	56	87.812	Seriola_lalandi_dorsalis
ENSCAPG00000011772	-	88	91.250	ENSSPUG00000011468	EIF3L	58	91.250	Sphenodon_punctatus
ENSCAPG00000011772	-	88	87.812	ENSSPAG00000021764	eif3s6ip	56	87.812	Stegastes_partitus
ENSCAPG00000011772	-	88	91.875	ENSSSCG00000000119	EIF3L	57	91.875	Sus_scrofa
ENSCAPG00000011772	-	88	90.938	ENSTGUG00000010488	-	56	90.938	Taeniopygia_guttata
ENSCAPG00000011772	-	88	87.812	ENSTRUG00000017695	eif3s6ip	59	87.812	Takifugu_rubripes
ENSCAPG00000011772	-	88	87.500	ENSTNIG00000013105	eif3s6ip	56	87.500	Tetraodon_nigroviridis
ENSCAPG00000011772	-	88	90.312	ENSTBEG00000003067	EIF3L	53	90.312	Tupaia_belangeri
ENSCAPG00000011772	-	88	91.875	ENSTTRG00000004812	EIF3L	54	91.875	Tursiops_truncatus
ENSCAPG00000011772	-	88	91.875	ENSUAMG00000020498	EIF3L	57	91.875	Ursus_americanus
ENSCAPG00000011772	-	88	91.875	ENSUMAG00000015166	EIF3L	57	91.875	Ursus_maritimus
ENSCAPG00000011772	-	88	91.875	ENSVVUG00000024013	EIF3L	57	91.875	Vulpes_vulpes
ENSCAPG00000011772	-	88	88.750	ENSXETG00000027274	eif3l	57	88.750	Xenopus_tropicalis
ENSCAPG00000011772	-	88	87.500	ENSXCOG00000003475	eif3s6ip	57	87.500	Xiphophorus_couchianus
ENSCAPG00000011772	-	88	87.500	ENSXMAG00000004578	eif3s6ip	60	87.500	Xiphophorus_maculatus