EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAPG00000011841 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 1470 bases
Position: chrAVPZ01000933.1:5647296-5648765
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000010592	RRM_1	PF00076.22	6.6e-36	1	3
ENSCAPP00000010592	RRM_1	PF00076.22	6.6e-36	2	3
ENSCAPP00000010592	RRM_1	PF00076.22	6.6e-36	3	3
ENSCAPP00000010593	RRM_1	PF00076.22	7.6e-36	1	3
ENSCAPP00000010593	RRM_1	PF00076.22	7.6e-36	2	3
ENSCAPP00000010593	RRM_1	PF00076.22	7.6e-36	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000014326	-	1155	-	ENSCAPP00000010593	384 (aa)	-	-
ENSCAPT00000014325	-	1122	-	ENSCAPP00000010592	373 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000011841's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000011841's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAPG00000011841	-	83	57.878	ENSCAPG00000017386	A1CF	61	57.878
ENSCAPG00000011841	-	99	92.412	ENSCAPG00000011928	-	76	92.412

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000011841	-	99	92.412	ENSG00000151962	RBM46	98	95.385	Homo_sapiens
ENSCAPG00000011841	-	79	79.592	ENSAPOG00000009209	rbm46	62	75.478	Acanthochromis_polyacanthus
ENSCAPG00000011841	-	99	92.412	ENSAMEG00000013290	RBM46	69	92.412	Ailuropoda_melanoleuca
ENSCAPG00000011841	-	82	73.443	ENSACIG00000014500	rbm46	64	73.443	Amphilophus_citrinellus
ENSCAPG00000011841	-	77	79.443	ENSAOCG00000001892	-	58	80.000	Amphiprion_ocellaris
ENSCAPG00000011841	-	76	80.000	ENSAPEG00000017762	rbm46	65	79.443	Amphiprion_percula
ENSCAPG00000011841	-	79	77.551	ENSATEG00000010775	rbm46	60	77.288	Anabas_testudineus
ENSCAPG00000011841	-	99	84.011	ENSAPLG00000005116	RBM46	79	84.054	Anas_platyrhynchos
ENSCAPG00000011841	-	99	87.534	ENSACAG00000015599	RBM46	68	87.534	Anolis_carolinensis
ENSCAPG00000011841	-	99	92.141	ENSANAG00000029193	RBM46	79	92.141	Aotus_nancymaae
ENSCAPG00000011841	-	94	65.833	ENSACLG00000016153	rbm46	64	65.928	Astatotilapia_calliptera
ENSCAPG00000011841	-	94	66.757	ENSAMXG00000020892	-	70	66.220	Astyanax_mexicanus
ENSCAPG00000011841	-	95	70.506	ENSAMXG00000009397	rbm46	77	70.588	Astyanax_mexicanus
ENSCAPG00000011841	-	99	91.599	ENSBTAG00000001696	RBM46	76	91.599	Bos_taurus
ENSCAPG00000011841	-	99	91.599	ENSCJAG00000001768	RBM46	79	91.599	Callithrix_jacchus
ENSCAPG00000011841	-	99	92.412	ENSCAFG00000008473	RBM46	76	92.412	Canis_familiaris
ENSCAPG00000011841	-	99	92.412	ENSCAFG00020002468	RBM46	75	92.412	Canis_lupus_dingo
ENSCAPG00000011841	-	99	91.870	ENSCHIG00000000502	RBM46	76	91.870	Capra_hircus
ENSCAPG00000011841	-	99	91.328	ENSTSYG00000010435	RBM46	79	91.328	Carlito_syrichta
ENSCAPG00000011841	-	99	88.889	ENSCPOG00000019272	-	69	88.649	Cavia_porcellus
ENSCAPG00000011841	-	99	98.113	ENSCPOG00000020396	-	74	98.118	Cavia_porcellus
ENSCAPG00000011841	-	99	92.412	ENSCPOG00000010284	-	79	92.412	Cavia_porcellus
ENSCAPG00000011841	-	99	92.683	ENSCCAG00000027619	-	79	92.683	Cebus_capucinus
ENSCAPG00000011841	-	99	73.984	ENSCCAG00000001323	-	75	73.984	Cebus_capucinus
ENSCAPG00000011841	-	99	92.412	ENSCATG00000040148	RBM46	79	92.412	Cercocebus_atys
ENSCAPG00000011841	-	99	93.496	ENSCLAG00000011886	-	71	93.496	Chinchilla_lanigera
ENSCAPG00000011841	-	99	91.599	ENSCLAG00000005846	-	79	91.599	Chinchilla_lanigera
ENSCAPG00000011841	-	99	92.683	ENSCSAG00000003263	RBM46	69	92.683	Chlorocebus_sabaeus
ENSCAPG00000011841	-	99	91.870	ENSCHOG00000003429	RBM46	70	91.870	Choloepus_hoffmanni
ENSCAPG00000011841	-	99	88.378	ENSCPBG00000009314	RBM46	81	88.378	Chrysemys_picta_bellii
ENSCAPG00000011841	-	99	91.870	ENSCANG00000039065	RBM46	79	91.870	Colobus_angolensis_palliatus
ENSCAPG00000011841	-	99	91.599	ENSCGRG00001016714	Rbm46	79	91.599	Cricetulus_griseus_chok1gshd
ENSCAPG00000011841	-	99	91.599	ENSCGRG00000011738	Rbm46	79	91.599	Cricetulus_griseus_crigri
ENSCAPG00000011841	-	77	70.833	ENSCSEG00000005530	rbm46	63	70.833	Cynoglossus_semilaevis
ENSCAPG00000011841	-	98	65.574	ENSCVAG00000021013	rbm46	76	64.690	Cyprinodon_variegatus
ENSCAPG00000011841	-	96	68.681	ENSDARG00000079452	rbm46	70	69.972	Danio_rerio
ENSCAPG00000011841	-	99	91.870	ENSDNOG00000016195	RBM46	69	91.870	Dasypus_novemcinctus
ENSCAPG00000011841	-	99	92.141	ENSDORG00000006405	Rbm46	79	92.141	Dipodomys_ordii
ENSCAPG00000011841	-	99	90.323	ENSETEG00000014902	RBM46	70	90.323	Echinops_telfairi
ENSCAPG00000011841	-	99	91.057	ENSEASG00005015821	RBM46	70	90.811	Equus_asinus_asinus
ENSCAPG00000011841	-	99	91.057	ENSECAG00000007649	RBM46	76	91.057	Equus_caballus
ENSCAPG00000011841	-	99	89.160	ENSEEUG00000011824	RBM46	69	89.160	Erinaceus_europaeus
ENSCAPG00000011841	-	98	69.355	ENSELUG00000008166	rbm46	96	68.519	Esox_lucius
ENSCAPG00000011841	-	99	92.683	ENSFCAG00000029812	RBM46	79	92.683	Felis_catus
ENSCAPG00000011841	-	99	83.558	ENSFALG00000013157	RBM46	73	83.558	Ficedula_albicollis
ENSCAPG00000011841	-	99	90.296	ENSFDAG00000006445	-	73	90.296	Fukomys_damarensis
ENSCAPG00000011841	-	99	88.710	ENSFDAG00000019281	-	70	88.710	Fukomys_damarensis
ENSCAPG00000011841	-	70	78.161	ENSFHEG00000013257	rbm46	67	78.000	Fundulus_heteroclitus
ENSCAPG00000011841	-	99	77.628	ENSGALG00000009278	RBM46	79	77.067	Gallus_gallus
ENSCAPG00000011841	-	76	80.000	ENSGAFG00000020245	rbm46	67	79.443	Gambusia_affinis
ENSCAPG00000011841	-	99	88.378	ENSGAGG00000002019	RBM46	71	88.378	Gopherus_agassizii
ENSCAPG00000011841	-	99	92.683	ENSGGOG00000001876	RBM46	79	92.683	Gorilla_gorilla
ENSCAPG00000011841	-	94	66.389	ENSHBUG00000009609	rbm46	79	66.482	Haplochromis_burtoni
ENSCAPG00000011841	-	99	90.244	ENSHGLG00000002463	-	85	90.244	Heterocephalus_glaber_female
ENSCAPG00000011841	-	98	77.657	ENSHGLG00000002940	-	72	77.657	Heterocephalus_glaber_female
ENSCAPG00000011841	-	99	80.488	ENSHGLG00000010742	-	72	79.730	Heterocephalus_glaber_female
ENSCAPG00000011841	-	99	89.431	ENSHGLG00100012752	-	79	89.189	Heterocephalus_glaber_male
ENSCAPG00000011841	-	99	78.862	ENSHGLG00100018987	-	73	78.862	Heterocephalus_glaber_male
ENSCAPG00000011841	-	99	80.488	ENSHGLG00100004977	-	72	79.730	Heterocephalus_glaber_male
ENSCAPG00000011841	-	81	59.603	ENSHCOG00000012998	rbm46	78	59.797	Hippocampus_comes
ENSCAPG00000011841	-	99	68.241	ENSIPUG00000024038	rbm46	77	68.325	Ictalurus_punctatus
ENSCAPG00000011841	-	99	92.683	ENSSTOG00000007918	RBM46	79	92.683	Ictidomys_tridecemlineatus
ENSCAPG00000011841	-	99	89.785	ENSJJAG00000003902	Rbm46	79	89.785	Jaculus_jaculus
ENSCAPG00000011841	-	82	76.190	ENSKMAG00000015127	rbm46	62	75.710	Kryptolebias_marmoratus
ENSCAPG00000011841	-	98	85.792	ENSLACG00000002062	RBM46	69	85.792	Latimeria_chalumnae
ENSCAPG00000011841	-	98	74.863	ENSLOCG00000008298	rbm46	79	74.863	Lepisosteus_oculatus
ENSCAPG00000011841	-	99	91.870	ENSLAFG00000015448	RBM46	79	91.870	Loxodonta_africana
ENSCAPG00000011841	-	99	92.683	ENSMFAG00000043485	RBM46	79	92.683	Macaca_fascicularis
ENSCAPG00000011841	-	99	92.683	ENSMMUG00000021147	RBM46	76	92.683	Macaca_mulatta
ENSCAPG00000011841	-	99	92.683	ENSMNEG00000002787	RBM46	79	92.683	Macaca_nemestrina
ENSCAPG00000011841	-	99	92.141	ENSMLEG00000029756	RBM46	79	92.141	Mandrillus_leucophaeus
ENSCAPG00000011841	-	94	67.222	ENSMAMG00000009093	rbm46	58	79.167	Mastacembelus_armatus
ENSCAPG00000011841	-	77	78.049	ENSMZEG00005027849	rbm46	61	77.509	Maylandia_zebra
ENSCAPG00000011841	-	99	78.167	ENSMGAG00000001457	RBM46	80	77.600	Meleagris_gallopavo
ENSCAPG00000011841	-	99	91.599	ENSMAUG00000009911	Rbm46	79	91.599	Mesocricetus_auratus
ENSCAPG00000011841	-	99	92.141	ENSMICG00000042747	RBM46	79	92.141	Microcebus_murinus
ENSCAPG00000011841	-	99	91.870	ENSMOCG00000001188	Rbm46	79	91.870	Microtus_ochrogaster
ENSCAPG00000011841	-	96	65.027	ENSMMOG00000011214	rbm46	72	62.760	Mola_mola
ENSCAPG00000011841	-	99	91.599	ENSMODG00000001302	RBM46	63	91.599	Monodelphis_domestica
ENSCAPG00000011841	-	94	66.854	ENSMALG00000006185	rbm46	75	67.135	Monopterus_albus
ENSCAPG00000011841	-	99	91.870	MGP_CAROLIEiJ_G0025101	Rbm46	79	91.870	Mus_caroli
ENSCAPG00000011841	-	99	92.141	ENSMUSG00000033882	Rbm46	79	92.141	Mus_musculus
ENSCAPG00000011841	-	99	91.599	MGP_PahariEiJ_G0026544	Rbm46	79	91.599	Mus_pahari
ENSCAPG00000011841	-	99	92.141	MGP_SPRETEiJ_G0026043	Rbm46	81	94.581	Mus_spretus
ENSCAPG00000011841	-	99	92.683	ENSMPUG00000005670	RBM46	76	92.683	Mustela_putorius_furo
ENSCAPG00000011841	-	99	91.351	ENSMLUG00000003221	RBM46	69	91.351	Myotis_lucifugus
ENSCAPG00000011841	-	99	91.057	ENSNGAG00000004231	Rbm46	78	91.057	Nannospalax_galili
ENSCAPG00000011841	-	77	78.397	ENSNBRG00000000273	rbm46	60	77.855	Neolamprologus_brichardi
ENSCAPG00000011841	-	99	92.412	ENSNLEG00000006184	RBM46	79	92.412	Nomascus_leucogenys
ENSCAPG00000011841	-	86	91.277	ENSMEUG00000013328	RBM46	76	91.111	Notamacropus_eugenii
ENSCAPG00000011841	-	75	91.786	ENSOPRG00000007136	RBM46	99	92.857	Ochotona_princeps
ENSCAPG00000011841	-	99	92.412	ENSODEG00000018002	-	72	92.412	Octodon_degus
ENSCAPG00000011841	-	99	89.702	ENSODEG00000000735	-	79	89.459	Octodon_degus
ENSCAPG00000011841	-	94	66.761	ENSONIG00000014096	rbm46	76	66.854	Oreochromis_niloticus
ENSCAPG00000011841	-	99	84.677	ENSOANG00000002141	RBM46	77	84.677	Ornithorhynchus_anatinus
ENSCAPG00000011841	-	99	92.412	ENSOCUG00000017859	RBM46	69	92.412	Oryctolagus_cuniculus
ENSCAPG00000011841	-	83	73.718	ENSORLG00000002429	rbm46	65	73.718	Oryzias_latipes
ENSCAPG00000011841	-	83	73.077	ENSORLG00020022154	rbm46	68	64.550	Oryzias_latipes_hni
ENSCAPG00000011841	-	83	74.038	ENSORLG00015020234	rbm46	77	64.211	Oryzias_latipes_hsok
ENSCAPG00000011841	-	77	76.923	ENSOMEG00000022580	rbm46	61	71.293	Oryzias_melastigma
ENSCAPG00000011841	-	99	92.412	ENSOGAG00000005647	RBM46	69	92.412	Otolemur_garnettii
ENSCAPG00000011841	-	99	91.599	ENSOARG00000016406	RBM46	76	91.599	Ovis_aries
ENSCAPG00000011841	-	99	92.683	ENSPPAG00000043236	RBM46	79	92.683	Pan_paniscus
ENSCAPG00000011841	-	99	92.683	ENSPPRG00000009416	RBM46	79	92.683	Panthera_pardus
ENSCAPG00000011841	-	99	92.683	ENSPTIG00000017449	RBM46	79	92.683	Panthera_tigris_altaica
ENSCAPG00000011841	-	99	92.683	ENSPTRG00000016538	RBM46	79	92.683	Pan_troglodytes
ENSCAPG00000011841	-	99	92.683	ENSPANG00000004186	RBM46	79	92.683	Papio_anubis
ENSCAPG00000011841	-	99	70.027	ENSPKIG00000015334	rbm46	66	70.027	Paramormyrops_kingsleyae
ENSCAPG00000011841	-	99	88.649	ENSPSIG00000006429	RBM46	76	88.649	Pelodiscus_sinensis
ENSCAPG00000011841	-	72	79.775	ENSPMGG00000019872	rbm46	64	79.775	Periophthalmus_magnuspinnatus
ENSCAPG00000011841	-	99	91.599	ENSPEMG00000013899	Rbm46	79	91.599	Peromyscus_maniculatus_bairdii
ENSCAPG00000011841	-	99	91.375	ENSPCIG00000029626	RBM46	76	91.375	Phascolarctos_cinereus
ENSCAPG00000011841	-	79	78.498	ENSPFOG00000001079	rbm46	54	77.966	Poecilia_formosa
ENSCAPG00000011841	-	79	78.231	ENSPLAG00000004541	rbm46	53	77.966	Poecilia_latipinna
ENSCAPG00000011841	-	79	78.498	ENSPMEG00000015724	rbm46	64	77.966	Poecilia_mexicana
ENSCAPG00000011841	-	79	78.498	ENSPREG00000014464	rbm46	64	78.498	Poecilia_reticulata
ENSCAPG00000011841	-	99	92.412	ENSPPYG00000015144	RBM46	69	92.412	Pongo_abelii
ENSCAPG00000011841	-	99	85.175	ENSPCAG00000003110	RBM46	69	86.253	Procavia_capensis
ENSCAPG00000011841	-	99	91.057	ENSPCOG00000024347	RBM46	79	91.057	Propithecus_coquereli
ENSCAPG00000011841	-	99	92.412	ENSPVAG00000008376	RBM46	69	92.412	Pteropus_vampyrus
ENSCAPG00000011841	-	94	71.625	ENSPNAG00000025312	rbm46	70	71.311	Pygocentrus_nattereri
ENSCAPG00000011841	-	99	91.870	ENSRNOG00000025823	Rbm46	69	91.870	Rattus_norvegicus
ENSCAPG00000011841	-	99	91.328	ENSRBIG00000032583	RBM46	79	91.328	Rhinopithecus_bieti
ENSCAPG00000011841	-	99	91.328	ENSRROG00000044288	RBM46	79	91.328	Rhinopithecus_roxellana
ENSCAPG00000011841	-	99	92.412	ENSSBOG00000033028	RBM46	79	92.412	Saimiri_boliviensis_boliviensis
ENSCAPG00000011841	-	99	91.599	ENSSHAG00000012596	RBM46	69	91.599	Sarcophilus_harrisii
ENSCAPG00000011841	-	98	73.077	ENSSFOG00015000087	rbm46	69	72.253	Scleropages_formosus
ENSCAPG00000011841	-	88	68.502	ENSSMAG00000017042	rbm46	71	68.502	Scophthalmus_maximus
ENSCAPG00000011841	-	79	79.522	ENSSDUG00000020645	rbm46	58	81.185	Seriola_dumerili
ENSCAPG00000011841	-	99	92.683	ENSSARG00000006520	RBM46	69	92.683	Sorex_araneus
ENSCAPG00000011841	-	99	88.347	ENSSPUG00000012525	-	69	88.347	Sphenodon_punctatus
ENSCAPG00000011841	-	98	87.978	ENSSPUG00000004773	-	77	87.738	Sphenodon_punctatus
ENSCAPG00000011841	-	81	74.834	ENSSPAG00000013697	rbm46	68	74.834	Stegastes_partitus
ENSCAPG00000011841	-	99	92.412	ENSSSCG00000008994	RBM46	76	92.412	Sus_scrofa
ENSCAPG00000011841	-	98	83.379	ENSTGUG00000005307	RBM46	79	83.379	Taeniopygia_guttata
ENSCAPG00000011841	-	77	78.671	ENSTRUG00000004237	rbm46	60	78.947	Takifugu_rubripes
ENSCAPG00000011841	-	80	75.000	ENSTNIG00000008714	rbm46	57	75.000	Tetraodon_nigroviridis
ENSCAPG00000011841	-	99	90.000	ENSTBEG00000013949	RBM46	69	90.437	Tupaia_belangeri
ENSCAPG00000011841	-	99	91.105	ENSTTRG00000001239	RBM46	70	91.105	Tursiops_truncatus
ENSCAPG00000011841	-	99	92.683	ENSUAMG00000026593	RBM46	76	92.683	Ursus_americanus
ENSCAPG00000011841	-	99	92.412	ENSUMAG00000016442	RBM46	76	92.412	Ursus_maritimus
ENSCAPG00000011841	-	99	92.683	ENSVVUG00000024957	RBM46	79	92.683	Vulpes_vulpes
ENSCAPG00000011841	-	98	77.260	ENSXETG00000022412	-	68	77.260	Xenopus_tropicalis
ENSCAPG00000011841	-	97	71.350	ENSXETG00000032067	-	98	70.799	Xenopus_tropicalis
ENSCAPG00000011841	-	98	52.973	ENSXETG00000032344	-	69	52.973	Xenopus_tropicalis
ENSCAPG00000011841	-	79	78.231	ENSXMAG00000008237	rbm46	61	77.703	Xiphophorus_maculatus