EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000011893 (Gene tree)
Gene ID: -
Gene Symbol: PNLDC1
Alias: FLJ40240|dJ195P10.2
Full Name: PARN like%2C ribonuclease domain containing 1
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Minus strand
Length: 17751 bases
Position: chrAVPZ01000567.1:10331435-10349185
Accession: 21185
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000010671	CAF1	PF04857.20	6.5e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000014404	PNLDC1-201	1377	-	ENSCAPP00000010671	458 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000011893's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000011893's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000011893	PNLDC1	99	61.509	ENSG00000146453	PNLDC1	99	61.509	Homo_sapiens
ENSCAPG00000011893	PNLDC1	99	62.500	ENSAMEG00000015371	PNLDC1	99	62.500	Ailuropoda_melanoleuca
ENSCAPG00000011893	PNLDC1	88	47.425	ENSAPLG00000007014	PNLDC1	88	47.425	Anas_platyrhynchos
ENSCAPG00000011893	PNLDC1	99	43.152	ENSACAG00000013667	PNLDC1	99	43.152	Anolis_carolinensis
ENSCAPG00000011893	PNLDC1	100	60.338	ENSANAG00000034713	PNLDC1	100	60.338	Aotus_nancymaae
ENSCAPG00000011893	PNLDC1	88	67.756	ENSBTAG00000015166	PNLDC1	87	67.756	Bos_taurus
ENSCAPG00000011893	PNLDC1	100	60.264	ENSCJAG00000011865	PNLDC1	100	60.264	Callithrix_jacchus
ENSCAPG00000011893	PNLDC1	100	63.534	ENSCAFG00000000740	PNLDC1	100	63.534	Canis_familiaris
ENSCAPG00000011893	PNLDC1	100	60.861	ENSCAFG00020017742	PNLDC1	100	60.861	Canis_lupus_dingo
ENSCAPG00000011893	PNLDC1	100	60.526	ENSCHIG00000003141	PNLDC1	100	60.526	Capra_hircus
ENSCAPG00000011893	PNLDC1	100	61.278	ENSTSYG00000005606	PNLDC1	100	61.278	Carlito_syrichta
ENSCAPG00000011893	PNLDC1	100	75.483	ENSCPOG00000019565	PNLDC1	100	75.483	Cavia_porcellus
ENSCAPG00000011893	PNLDC1	100	60.714	ENSCCAG00000026232	PNLDC1	100	60.714	Cebus_capucinus
ENSCAPG00000011893	PNLDC1	100	61.959	ENSCATG00000033196	PNLDC1	100	61.959	Cercocebus_atys
ENSCAPG00000011893	PNLDC1	99	69.811	ENSCLAG00000003228	PNLDC1	99	69.811	Chinchilla_lanigera
ENSCAPG00000011893	PNLDC1	89	65.806	ENSCSAG00000012478	PNLDC1	89	65.806	Chlorocebus_sabaeus
ENSCAPG00000011893	PNLDC1	96	47.683	ENSCPBG00000004050	PNLDC1	100	47.683	Chrysemys_picta_bellii
ENSCAPG00000011893	PNLDC1	89	65.875	ENSCANG00000043076	PNLDC1	89	65.875	Colobus_angolensis_palliatus
ENSCAPG00000011893	PNLDC1	100	50.503	ENSCGRG00001011981	-	99	50.503	Cricetulus_griseus_chok1gshd
ENSCAPG00000011893	PNLDC1	100	58.192	ENSCGRG00001007470	-	99	58.192	Cricetulus_griseus_chok1gshd
ENSCAPG00000011893	PNLDC1	100	51.186	ENSCGRG00000003103	-	99	51.186	Cricetulus_griseus_crigri
ENSCAPG00000011893	PNLDC1	100	58.192	ENSCGRG00000010221	-	99	58.192	Cricetulus_griseus_crigri
ENSCAPG00000011893	PNLDC1	100	59.398	ENSDNOG00000013709	PNLDC1	100	59.398	Dasypus_novemcinctus
ENSCAPG00000011893	PNLDC1	100	61.977	ENSDORG00000011517	Pnldc1	100	61.977	Dipodomys_ordii
ENSCAPG00000011893	PNLDC1	95	56.707	ENSETEG00000007587	PNLDC1	98	56.707	Echinops_telfairi
ENSCAPG00000011893	PNLDC1	100	58.034	ENSEASG00005019029	PNLDC1	100	58.034	Equus_asinus_asinus
ENSCAPG00000011893	PNLDC1	100	63.346	ENSECAG00000012898	PNLDC1	100	63.346	Equus_caballus
ENSCAPG00000011893	PNLDC1	66	78.125	ENSEEUG00000005717	-	86	78.125	Erinaceus_europaeus
ENSCAPG00000011893	PNLDC1	100	63.089	ENSFCAG00000002848	PNLDC1	100	63.089	Felis_catus
ENSCAPG00000011893	PNLDC1	89	47.957	ENSFALG00000012081	PNLDC1	91	47.957	Ficedula_albicollis
ENSCAPG00000011893	PNLDC1	100	70.489	ENSFDAG00000021334	PNLDC1	100	70.489	Fukomys_damarensis
ENSCAPG00000011893	PNLDC1	76	41.805	ENSGALG00000011624	PNLDC1	82	41.805	Gallus_gallus
ENSCAPG00000011893	PNLDC1	99	48.507	ENSGAGG00000015276	PNLDC1	100	48.456	Gopherus_agassizii
ENSCAPG00000011893	PNLDC1	100	62.452	ENSGGOG00000014077	PNLDC1	100	62.452	Gorilla_gorilla
ENSCAPG00000011893	PNLDC1	100	71.563	ENSHGLG00000006889	PNLDC1	100	71.563	Heterocephalus_glaber_female
ENSCAPG00000011893	PNLDC1	100	71.563	ENSHGLG00100018275	PNLDC1	100	71.563	Heterocephalus_glaber_male
ENSCAPG00000011893	PNLDC1	99	64.906	ENSSTOG00000005595	PNLDC1	99	64.906	Ictidomys_tridecemlineatus
ENSCAPG00000011893	PNLDC1	99	64.078	ENSJJAG00000009937	Pnldc1	99	64.078	Jaculus_jaculus
ENSCAPG00000011893	PNLDC1	100	61.959	ENSMFAG00000041296	PNLDC1	100	61.959	Macaca_fascicularis
ENSCAPG00000011893	PNLDC1	100	61.959	ENSMMUG00000004181	PNLDC1	100	61.959	Macaca_mulatta
ENSCAPG00000011893	PNLDC1	100	61.770	ENSMNEG00000034271	PNLDC1	100	61.770	Macaca_nemestrina
ENSCAPG00000011893	PNLDC1	100	59.134	ENSMLEG00000044059	PNLDC1	100	59.134	Mandrillus_leucophaeus
ENSCAPG00000011893	PNLDC1	89	48.164	ENSMGAG00000012470	PNLDC1	88	48.164	Meleagris_gallopavo
ENSCAPG00000011893	PNLDC1	99	47.581	ENSMAUG00000012298	Pnldc1	100	47.581	Mesocricetus_auratus
ENSCAPG00000011893	PNLDC1	100	61.205	ENSMICG00000008021	PNLDC1	100	61.205	Microcebus_murinus
ENSCAPG00000011893	PNLDC1	100	62.734	ENSMOCG00000014287	Pnldc1	100	62.734	Microtus_ochrogaster
ENSCAPG00000011893	PNLDC1	99	53.832	ENSMODG00000007420	PNLDC1	99	53.832	Monodelphis_domestica
ENSCAPG00000011893	PNLDC1	100	62.406	MGP_CAROLIEiJ_G0021045	Pnldc1	100	62.406	Mus_caroli
ENSCAPG00000011893	PNLDC1	100	63.158	ENSMUSG00000073460	Pnldc1	100	63.158	Mus_musculus
ENSCAPG00000011893	PNLDC1	100	62.406	MGP_PahariEiJ_G0023361	Pnldc1	100	62.406	Mus_pahari
ENSCAPG00000011893	PNLDC1	100	62.406	MGP_SPRETEiJ_G0021975	Pnldc1	100	62.406	Mus_spretus
ENSCAPG00000011893	PNLDC1	99	62.004	ENSMPUG00000004920	PNLDC1	99	62.004	Mustela_putorius_furo
ENSCAPG00000011893	PNLDC1	100	62.524	ENSMLUG00000000747	PNLDC1	100	62.524	Myotis_lucifugus
ENSCAPG00000011893	PNLDC1	100	63.089	ENSNGAG00000017714	Pnldc1	99	63.089	Nannospalax_galili
ENSCAPG00000011893	PNLDC1	89	65.227	ENSNLEG00000011282	PNLDC1	89	65.227	Nomascus_leucogenys
ENSCAPG00000011893	PNLDC1	51	50.694	ENSMEUG00000014042	-	100	50.694	Notamacropus_eugenii
ENSCAPG00000011893	PNLDC1	62	48.750	ENSMEUG00000011926	-	64	48.750	Notamacropus_eugenii
ENSCAPG00000011893	PNLDC1	69	64.489	ENSOPRG00000003813	PNLDC1	66	64.489	Ochotona_princeps
ENSCAPG00000011893	PNLDC1	100	70.056	ENSODEG00000008047	PNLDC1	100	70.056	Octodon_degus
ENSCAPG00000011893	PNLDC1	89	43.629	ENSOANG00000012199	PNLDC1	99	41.869	Ornithorhynchus_anatinus
ENSCAPG00000011893	PNLDC1	100	62.030	ENSOCUG00000013867	PNLDC1	100	62.030	Oryctolagus_cuniculus
ENSCAPG00000011893	PNLDC1	99	62.571	ENSOGAG00000007331	PNLDC1	100	62.571	Otolemur_garnettii
ENSCAPG00000011893	PNLDC1	100	60.829	ENSOARG00000004585	PNLDC1	100	60.829	Ovis_aries
ENSCAPG00000011893	PNLDC1	100	61.553	ENSPPAG00000026651	PNLDC1	100	61.553	Pan_paniscus
ENSCAPG00000011893	PNLDC1	100	62.900	ENSPPRG00000012854	PNLDC1	100	62.900	Panthera_pardus
ENSCAPG00000011893	PNLDC1	89	65.227	ENSPTIG00000011501	PNLDC1	87	65.227	Panthera_tigris_altaica
ENSCAPG00000011893	PNLDC1	100	61.394	ENSPTRG00000018762	PNLDC1	100	61.394	Pan_troglodytes
ENSCAPG00000011893	PNLDC1	100	62.147	ENSPANG00000022009	PNLDC1	100	62.147	Papio_anubis
ENSCAPG00000011893	PNLDC1	100	62.782	ENSPEMG00000016301	Pnldc1	99	62.782	Peromyscus_maniculatus_bairdii
ENSCAPG00000011893	PNLDC1	84	59.226	ENSPCIG00000023412	PNLDC1	100	59.226	Phascolarctos_cinereus
ENSCAPG00000011893	PNLDC1	100	56.874	ENSPPYG00000017148	PNLDC1	100	56.874	Pongo_abelii
ENSCAPG00000011893	PNLDC1	99	51.321	ENSPCAG00000014169	PNLDC1	99	51.321	Procavia_capensis
ENSCAPG00000011893	PNLDC1	100	61.770	ENSPCOG00000025722	PNLDC1	100	61.770	Propithecus_coquereli
ENSCAPG00000011893	PNLDC1	68	57.143	ENSPVAG00000005325	PNLDC1	73	57.143	Pteropus_vampyrus
ENSCAPG00000011893	PNLDC1	100	62.406	ENSRNOG00000023140	Pnldc1	100	62.406	Rattus_norvegicus
ENSCAPG00000011893	PNLDC1	100	65.992	ENSRBIG00000033806	PNLDC1	100	65.992	Rhinopithecus_bieti
ENSCAPG00000011893	PNLDC1	89	66.955	ENSRROG00000043919	PNLDC1	89	66.955	Rhinopithecus_roxellana
ENSCAPG00000011893	PNLDC1	100	60.902	ENSSBOG00000019135	PNLDC1	100	60.902	Saimiri_boliviensis_boliviensis
ENSCAPG00000011893	PNLDC1	89	59.002	ENSSHAG00000015192	PNLDC1	99	48.116	Sarcophilus_harrisii
ENSCAPG00000011893	PNLDC1	89	66.307	ENSSSCG00000004046	PNLDC1	90	66.307	Sus_scrofa
ENSCAPG00000011893	PNLDC1	89	46.767	ENSTGUG00000011418	PNLDC1	95	46.767	Taeniopygia_guttata
ENSCAPG00000011893	PNLDC1	89	60.256	ENSTBEG00000009131	PNLDC1	89	60.256	Tupaia_belangeri
ENSCAPG00000011893	PNLDC1	68	50.646	ENSTTRG00000010409	PNLDC1	73	50.646	Tursiops_truncatus
ENSCAPG00000011893	PNLDC1	99	50.844	ENSUAMG00000015783	PNLDC1	99	50.844	Ursus_americanus
ENSCAPG00000011893	PNLDC1	85	60.841	ENSUMAG00000011903	PNLDC1	90	60.841	Ursus_maritimus
ENSCAPG00000011893	PNLDC1	96	63.281	ENSVVUG00000006586	PNLDC1	94	68.035	Vulpes_vulpes