EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAPG00000011928 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Minus strand
Length: 21425 bases
Position: chrAVPZ01000778.1:34926988-34948412
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000010711	DND1_DSRM	PF14709.7	5.8e-28	1	1
ENSCAPP00000010711	RRM_1	PF00076.22	7.6e-36	1	3
ENSCAPP00000010711	RRM_1	PF00076.22	7.6e-36	2	3
ENSCAPP00000010711	RRM_1	PF00076.22	7.6e-36	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000014444	-	1458	-	ENSCAPP00000010711	485 (aa)	-	UPI000350AE5A

Gene Model

Click here to download ENSCAPG00000011928's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000011928's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAPG00000011928	-	76	92.412	ENSCAPG00000011841	-	99	92.412
ENSCAPG00000011928	-	96	46.452	ENSCAPG00000017386	A1CF	84	46.882

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000011928	-	100	96.082	ENSG00000151962	RBM46	100	99.248	Homo_sapiens
ENSCAPG00000011928	-	94	65.161	ENSAPOG00000009209	rbm46	91	64.756	Acanthochromis_polyacanthus
ENSCAPG00000011928	-	98	94.792	ENSAMEG00000013290	RBM46	90	94.792	Ailuropoda_melanoleuca
ENSCAPG00000011928	-	96	59.454	ENSACIG00000014500	rbm46	91	59.664	Amphilophus_citrinellus
ENSCAPG00000011928	-	92	65.843	ENSAOCG00000001892	-	86	65.843	Amphiprion_ocellaris
ENSCAPG00000011928	-	92	65.843	ENSAPEG00000017762	rbm46	96	65.843	Amphiprion_percula
ENSCAPG00000011928	-	94	63.676	ENSATEG00000010775	rbm46	86	63.676	Anabas_testudineus
ENSCAPG00000011928	-	96	86.938	ENSAPLG00000005116	RBM46	100	86.938	Anas_platyrhynchos
ENSCAPG00000011928	-	96	89.957	ENSACAG00000015599	RBM46	87	89.957	Anolis_carolinensis
ENSCAPG00000011928	-	100	95.258	ENSANAG00000029193	RBM46	100	95.258	Aotus_nancymaae
ENSCAPG00000011928	-	93	63.774	ENSACLG00000016153	rbm46	81	63.578	Astatotilapia_calliptera
ENSCAPG00000011928	-	93	66.075	ENSAMXG00000009397	rbm46	98	66.075	Astyanax_mexicanus
ENSCAPG00000011928	-	92	62.907	ENSAMXG00000020892	-	87	62.607	Astyanax_mexicanus
ENSCAPG00000011928	-	100	95.670	ENSBTAG00000001696	RBM46	100	95.670	Bos_taurus
ENSCAPG00000011928	-	100	95.052	ENSCJAG00000001768	RBM46	100	95.052	Callithrix_jacchus
ENSCAPG00000011928	-	100	96.701	ENSCAFG00000008473	RBM46	100	96.701	Canis_familiaris
ENSCAPG00000011928	-	99	94.421	ENSCAFG00020002468	RBM46	97	94.421	Canis_lupus_dingo
ENSCAPG00000011928	-	100	96.082	ENSCHIG00000000502	RBM46	100	96.082	Capra_hircus
ENSCAPG00000011928	-	100	95.258	ENSTSYG00000010435	RBM46	100	95.258	Carlito_syrichta
ENSCAPG00000011928	-	98	93.474	ENSCPOG00000020396	-	95	93.474	Cavia_porcellus
ENSCAPG00000011928	-	100	100.000	ENSCPOG00000010284	-	100	100.000	Cavia_porcellus
ENSCAPG00000011928	-	97	95.763	ENSCPOG00000019272	-	88	95.763	Cavia_porcellus
ENSCAPG00000011928	-	99	79.707	ENSCCAG00000001323	-	99	79.579	Cebus_capucinus
ENSCAPG00000011928	-	100	96.082	ENSCCAG00000027619	-	100	96.082	Cebus_capucinus
ENSCAPG00000011928	-	100	95.464	ENSCATG00000040148	RBM46	100	95.464	Cercocebus_atys
ENSCAPG00000011928	-	99	94.351	ENSCLAG00000011886	-	92	94.351	Chinchilla_lanigera
ENSCAPG00000011928	-	100	97.732	ENSCLAG00000005846	-	100	97.732	Chinchilla_lanigera
ENSCAPG00000011928	-	98	94.375	ENSCSAG00000003263	RBM46	90	94.375	Chlorocebus_sabaeus
ENSCAPG00000011928	-	96	95.299	ENSCHOG00000003429	RBM46	90	93.750	Choloepus_hoffmanni
ENSCAPG00000011928	-	92	92.809	ENSCPBG00000009314	RBM46	97	92.809	Chrysemys_picta_bellii
ENSCAPG00000011928	-	100	95.464	ENSCANG00000039065	RBM46	100	95.464	Colobus_angolensis_palliatus
ENSCAPG00000011928	-	100	96.082	ENSCGRG00001016714	Rbm46	100	96.082	Cricetulus_griseus_chok1gshd
ENSCAPG00000011928	-	100	96.082	ENSCGRG00000011738	Rbm46	100	96.082	Cricetulus_griseus_crigri
ENSCAPG00000011928	-	92	58.057	ENSCSEG00000005530	rbm46	96	58.057	Cynoglossus_semilaevis
ENSCAPG00000011928	-	98	62.316	ENSCVAG00000021013	rbm46	97	62.316	Cyprinodon_variegatus
ENSCAPG00000011928	-	93	66.883	ENSDARG00000079452	rbm46	87	67.544	Danio_rerio
ENSCAPG00000011928	-	98	94.572	ENSDNOG00000016195	RBM46	90	94.375	Dasypus_novemcinctus
ENSCAPG00000011928	-	100	95.876	ENSDORG00000006405	Rbm46	100	95.876	Dipodomys_ordii
ENSCAPG00000011928	-	96	94.647	ENSETEG00000014902	RBM46	88	94.647	Echinops_telfairi
ENSCAPG00000011928	-	98	93.333	ENSEASG00005015821	RBM46	90	93.333	Equus_asinus_asinus
ENSCAPG00000011928	-	100	94.845	ENSECAG00000007649	RBM46	100	94.845	Equus_caballus
ENSCAPG00000011928	-	96	92.949	ENSEEUG00000011824	RBM46	88	92.949	Erinaceus_europaeus
ENSCAPG00000011928	-	76	69.947	ENSELUG00000008166	rbm46	94	69.947	Esox_lucius
ENSCAPG00000011928	-	100	96.495	ENSFCAG00000029812	RBM46	100	96.495	Felis_catus
ENSCAPG00000011928	-	99	83.437	ENSFALG00000013157	RBM46	95	83.437	Ficedula_albicollis
ENSCAPG00000011928	-	99	91.841	ENSFDAG00000006445	-	95	91.841	Fukomys_damarensis
ENSCAPG00000011928	-	98	93.125	ENSFDAG00000019281	-	90	93.125	Fukomys_damarensis
ENSCAPG00000011928	-	81	61.558	ENSFHEG00000013257	rbm46	87	61.558	Fundulus_heteroclitus
ENSCAPG00000011928	-	98	78.481	ENSGALG00000009278	RBM46	100	78.481	Gallus_gallus
ENSCAPG00000011928	-	59	80.139	ENSGAFG00000020245	rbm46	67	80.139	Gambusia_affinis
ENSCAPG00000011928	-	96	92.521	ENSGAGG00000002019	RBM46	89	92.521	Gopherus_agassizii
ENSCAPG00000011928	-	100	95.876	ENSGGOG00000001876	RBM46	100	95.876	Gorilla_gorilla
ENSCAPG00000011928	-	92	61.211	ENSHBUG00000009609	rbm46	91	65.952	Haplochromis_burtoni
ENSCAPG00000011928	-	97	81.144	ENSHGLG00000002940	-	89	81.144	Heterocephalus_glaber_female
ENSCAPG00000011928	-	91	82.045	ENSHGLG00000010742	-	86	81.591	Heterocephalus_glaber_female
ENSCAPG00000011928	-	100	89.278	ENSHGLG00000002463	-	99	96.074	Heterocephalus_glaber_female
ENSCAPG00000011928	-	97	77.426	ENSHGLG00100018987	-	89	77.426	Heterocephalus_glaber_male
ENSCAPG00000011928	-	100	96.289	ENSHGLG00100012752	-	100	96.289	Heterocephalus_glaber_male
ENSCAPG00000011928	-	91	82.045	ENSHGLG00100004977	-	86	81.591	Heterocephalus_glaber_male
ENSCAPG00000011928	-	98	50.420	ENSHCOG00000012998	rbm46	94	50.420	Hippocampus_comes
ENSCAPG00000011928	-	95	66.388	ENSIPUG00000024038	rbm46	96	66.042	Ictalurus_punctatus
ENSCAPG00000011928	-	100	96.495	ENSSTOG00000007918	RBM46	100	96.495	Ictidomys_tridecemlineatus
ENSCAPG00000011928	-	100	93.814	ENSJJAG00000003902	Rbm46	100	93.814	Jaculus_jaculus
ENSCAPG00000011928	-	96	63.080	ENSKMAG00000015127	rbm46	88	63.080	Kryptolebias_marmoratus
ENSCAPG00000011928	-	96	88.034	ENSLACG00000002062	RBM46	88	88.034	Latimeria_chalumnae
ENSCAPG00000011928	-	92	76.339	ENSLOCG00000008298	rbm46	96	76.339	Lepisosteus_oculatus
ENSCAPG00000011928	-	96	95.931	ENSLAFG00000015448	RBM46	99	95.931	Loxodonta_africana
ENSCAPG00000011928	-	100	95.876	ENSMFAG00000043485	RBM46	100	95.876	Macaca_fascicularis
ENSCAPG00000011928	-	100	95.876	ENSMMUG00000021147	RBM46	100	95.876	Macaca_mulatta
ENSCAPG00000011928	-	100	95.876	ENSMNEG00000002787	RBM46	100	95.876	Macaca_nemestrina
ENSCAPG00000011928	-	100	95.258	ENSMLEG00000029756	RBM46	100	95.258	Mandrillus_leucophaeus
ENSCAPG00000011928	-	92	66.004	ENSMAMG00000009093	rbm46	88	65.563	Mastacembelus_armatus
ENSCAPG00000011928	-	94	63.834	ENSMZEG00005027849	rbm46	94	63.362	Maylandia_zebra
ENSCAPG00000011928	-	97	79.531	ENSMGAG00000001457	RBM46	99	79.531	Meleagris_gallopavo
ENSCAPG00000011928	-	100	96.082	ENSMAUG00000009911	Rbm46	100	96.082	Mesocricetus_auratus
ENSCAPG00000011928	-	100	95.670	ENSMICG00000042747	RBM46	100	95.670	Microcebus_murinus
ENSCAPG00000011928	-	100	96.082	ENSMOCG00000001188	Rbm46	100	96.082	Microtus_ochrogaster
ENSCAPG00000011928	-	93	62.882	ENSMMOG00000011214	rbm46	86	62.882	Mola_mola
ENSCAPG00000011928	-	97	95.319	ENSMODG00000001302	RBM46	81	95.319	Monodelphis_domestica
ENSCAPG00000011928	-	91	61.991	ENSMALG00000006185	rbm46	93	62.217	Monopterus_albus
ENSCAPG00000011928	-	100	96.495	MGP_CAROLIEiJ_G0025101	Rbm46	100	96.495	Mus_caroli
ENSCAPG00000011928	-	100	96.082	ENSMUSG00000033882	Rbm46	100	96.082	Mus_musculus
ENSCAPG00000011928	-	100	95.876	MGP_PahariEiJ_G0026544	Rbm46	100	95.876	Mus_pahari
ENSCAPG00000011928	-	100	95.876	MGP_SPRETEiJ_G0026043	Rbm46	100	95.876	Mus_spretus
ENSCAPG00000011928	-	100	96.495	ENSMPUG00000005670	RBM46	100	96.495	Mustela_putorius_furo
ENSCAPG00000011928	-	98	93.750	ENSMLUG00000003221	RBM46	90	93.750	Myotis_lucifugus
ENSCAPG00000011928	-	100	95.464	ENSNGAG00000004231	Rbm46	100	95.464	Nannospalax_galili
ENSCAPG00000011928	-	92	64.798	ENSNBRG00000000273	rbm46	84	64.798	Neolamprologus_brichardi
ENSCAPG00000011928	-	100	95.670	ENSNLEG00000006184	RBM46	100	95.670	Nomascus_leucogenys
ENSCAPG00000011928	-	86	95.673	ENSMEUG00000013328	RBM46	99	95.610	Notamacropus_eugenii
ENSCAPG00000011928	-	58	97.173	ENSOPRG00000007136	RBM46	100	97.173	Ochotona_princeps
ENSCAPG00000011928	-	100	95.876	ENSODEG00000000735	-	100	95.876	Octodon_degus
ENSCAPG00000011928	-	99	93.096	ENSODEG00000018002	-	93	93.096	Octodon_degus
ENSCAPG00000011928	-	92	65.111	ENSONIG00000014096	rbm46	96	65.111	Oreochromis_niloticus
ENSCAPG00000011928	-	100	86.008	ENSOANG00000002141	RBM46	100	86.008	Ornithorhynchus_anatinus
ENSCAPG00000011928	-	98	94.792	ENSOCUG00000017859	RBM46	90	94.792	Oryctolagus_cuniculus
ENSCAPG00000011928	-	96	61.359	ENSORLG00000002429	rbm46	91	61.656	Oryzias_latipes
ENSCAPG00000011928	-	96	61.620	ENSORLG00020022154	rbm46	86	60.700	Oryzias_latipes_hni
ENSCAPG00000011928	-	97	61.571	ENSORLG00015020234	rbm46	97	60.619	Oryzias_latipes_hsok
ENSCAPG00000011928	-	92	61.863	ENSOMEG00000022580	rbm46	86	62.528	Oryzias_melastigma
ENSCAPG00000011928	-	98	94.792	ENSOGAG00000005647	RBM46	90	94.792	Otolemur_garnettii
ENSCAPG00000011928	-	100	95.876	ENSOARG00000016406	RBM46	100	95.876	Ovis_aries
ENSCAPG00000011928	-	100	95.876	ENSPPAG00000043236	RBM46	100	95.876	Pan_paniscus
ENSCAPG00000011928	-	100	96.289	ENSPPRG00000009416	RBM46	100	96.289	Panthera_pardus
ENSCAPG00000011928	-	100	96.289	ENSPTIG00000017449	RBM46	100	96.289	Panthera_tigris_altaica
ENSCAPG00000011928	-	100	95.876	ENSPTRG00000016538	RBM46	100	95.876	Pan_troglodytes
ENSCAPG00000011928	-	100	95.876	ENSPANG00000004186	RBM46	100	95.876	Papio_anubis
ENSCAPG00000011928	-	96	69.807	ENSPKIG00000015334	rbm46	81	69.807	Paramormyrops_kingsleyae
ENSCAPG00000011928	-	99	89.980	ENSPSIG00000006429	RBM46	99	89.980	Pelodiscus_sinensis
ENSCAPG00000011928	-	92	81.273	ENSPMGG00000019872	rbm46	92	81.273	Periophthalmus_magnuspinnatus
ENSCAPG00000011928	-	100	96.082	ENSPEMG00000013899	Rbm46	100	96.082	Peromyscus_maniculatus_bairdii
ENSCAPG00000011928	-	100	95.464	ENSPCIG00000029626	RBM46	100	95.464	Phascolarctos_cinereus
ENSCAPG00000011928	-	82	78.644	ENSPFOG00000001079	rbm46	73	78.644	Poecilia_formosa
ENSCAPG00000011928	-	96	62.762	ENSPLAG00000004541	rbm46	83	62.162	Poecilia_latipinna
ENSCAPG00000011928	-	96	62.762	ENSPMEG00000015724	rbm46	92	64.459	Poecilia_mexicana
ENSCAPG00000011928	-	97	63.924	ENSPREG00000014464	rbm46	98	63.924	Poecilia_reticulata
ENSCAPG00000011928	-	98	94.167	ENSPPYG00000015144	RBM46	90	94.167	Pongo_abelii
ENSCAPG00000011928	-	96	88.889	ENSPCAG00000003110	RBM46	88	89.744	Procavia_capensis
ENSCAPG00000011928	-	100	95.258	ENSPCOG00000024347	RBM46	100	95.258	Propithecus_coquereli
ENSCAPG00000011928	-	96	96.368	ENSPVAG00000008376	RBM46	88	96.368	Pteropus_vampyrus
ENSCAPG00000011928	-	92	68.615	ENSPNAG00000025312	rbm46	88	68.615	Pygocentrus_nattereri
ENSCAPG00000011928	-	98	94.792	ENSRNOG00000025823	Rbm46	90	94.792	Rattus_norvegicus
ENSCAPG00000011928	-	100	94.845	ENSRBIG00000032583	RBM46	100	94.845	Rhinopithecus_bieti
ENSCAPG00000011928	-	100	94.639	ENSRROG00000044288	RBM46	100	94.639	Rhinopithecus_roxellana
ENSCAPG00000011928	-	100	95.876	ENSSBOG00000033028	RBM46	100	95.876	Saimiri_boliviensis_boliviensis
ENSCAPG00000011928	-	96	95.726	ENSSHAG00000012596	RBM46	88	95.726	Sarcophilus_harrisii
ENSCAPG00000011928	-	95	72.174	ENSSFOG00015000087	rbm46	87	71.522	Scleropages_formosus
ENSCAPG00000011928	-	93	62.444	ENSSMAG00000017042	rbm46	93	62.444	Scophthalmus_maximus
ENSCAPG00000011928	-	94	65.944	ENSSDUG00000020645	rbm46	89	65.944	Seriola_dumerili
ENSCAPG00000011928	-	96	96.581	ENSSARG00000006520	RBM46	88	96.581	Sorex_araneus
ENSCAPG00000011928	-	99	90.871	ENSSPUG00000012525	-	89	90.871	Sphenodon_punctatus
ENSCAPG00000011928	-	99	89.562	ENSSPUG00000004773	-	99	89.562	Sphenodon_punctatus
ENSCAPG00000011928	-	96	61.456	ENSSPAG00000013697	rbm46	97	61.456	Stegastes_partitus
ENSCAPG00000011928	-	100	96.289	ENSSSCG00000008994	RBM46	100	96.289	Sus_scrofa
ENSCAPG00000011928	-	96	83.940	ENSTGUG00000005307	RBM46	100	83.940	Taeniopygia_guttata
ENSCAPG00000011928	-	94	62.963	ENSTRUG00000004237	rbm46	91	62.963	Takifugu_rubripes
ENSCAPG00000011928	-	96	59.290	ENSTNIG00000008714	rbm46	88	59.290	Tetraodon_nigroviridis
ENSCAPG00000011928	-	96	93.376	ENSTBEG00000013949	RBM46	88	93.376	Tupaia_belangeri
ENSCAPG00000011928	-	98	93.125	ENSTTRG00000001239	RBM46	90	93.125	Tursiops_truncatus
ENSCAPG00000011928	-	100	96.495	ENSUAMG00000026593	RBM46	100	96.495	Ursus_americanus
ENSCAPG00000011928	-	100	96.289	ENSUMAG00000016442	RBM46	100	96.289	Ursus_maritimus
ENSCAPG00000011928	-	100	96.495	ENSVVUG00000024957	RBM46	100	96.495	Vulpes_vulpes
ENSCAPG00000011928	-	76	72.087	ENSXETG00000032067	-	100	71.545	Xenopus_tropicalis
ENSCAPG00000011928	-	97	76.221	ENSXETG00000022412	-	88	76.221	Xenopus_tropicalis
ENSCAPG00000011928	-	97	56.092	ENSXETG00000032344	-	88	56.092	Xenopus_tropicalis
ENSCAPG00000011928	-	92	64.924	ENSXMAG00000008237	rbm46	89	64.924	Xiphophorus_maculatus