EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAPG00000011942 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 1061 bases
Position: chrAVPZ01000611.1:3826977-3828037
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000010726	RRM_1	PF00076.22	3.3e-35	1	3
ENSCAPP00000010726	RRM_1	PF00076.22	3.3e-35	2	3
ENSCAPP00000010726	RRM_1	PF00076.22	3.3e-35	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000014459	-	936	-	ENSCAPP00000010726	311 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000011942's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000011942's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAPG00000011942	-	67	57.977	ENSCAPG00000017620	ELAVL3	83	57.977
ENSCAPG00000011942	-	79	56.000	ENSCAPG00000009014	ELAVL1	94	56.000
ENSCAPG00000011942	-	83	63.732	ENSCAPG00000003609	ELAVL2	100	61.613
ENSCAPG00000011942	-	84	49.822	ENSCAPG00000005993	ELAVL4	100	49.822

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000011942	-	99	71.309	ENSG00000162374	ELAVL4	98	71.309	Homo_sapiens
ENSCAPG00000011942	-	99	68.391	ENSAPOG00000020329	elavl4	95	66.482	Acanthochromis_polyacanthus
ENSCAPG00000011942	-	99	68.901	ENSAMEG00000017455	ELAVL4	97	68.901	Ailuropoda_melanoleuca
ENSCAPG00000011942	-	99	66.482	ENSACIG00000008793	elavl4	100	66.482	Amphilophus_citrinellus
ENSCAPG00000011942	-	63	62.500	ENSAOCG00000022503	elavl4	67	62.500	Amphiprion_ocellaris
ENSCAPG00000011942	-	99	66.482	ENSAPEG00000022826	elavl4	93	66.482	Amphiprion_percula
ENSCAPG00000011942	-	99	66.482	ENSATEG00000006136	elavl4	98	66.482	Anabas_testudineus
ENSCAPG00000011942	-	99	68.649	ENSACAG00000004527	ELAVL4	97	68.649	Anolis_carolinensis
ENSCAPG00000011942	-	99	73.121	ENSANAG00000030598	ELAVL4	98	73.121	Aotus_nancymaae
ENSCAPG00000011942	-	99	68.091	ENSACLG00000002786	elavl4	95	66.209	Astatotilapia_calliptera
ENSCAPG00000011942	-	99	69.942	ENSAMXG00000000687	elavl4	95	67.967	Astyanax_mexicanus
ENSCAPG00000011942	-	99	73.699	ENSBTAG00000021046	ELAVL4	98	73.699	Bos_taurus
ENSCAPG00000011942	-	98	50.455	WBGene00001368	exc-7	70	50.455	Caenorhabditis_elegans
ENSCAPG00000011942	-	99	73.121	ENSCJAG00000013725	ELAVL4	97	73.121	Callithrix_jacchus
ENSCAPG00000011942	-	99	71.588	ENSCAFG00000003927	ELAVL4	98	71.588	Canis_familiaris
ENSCAPG00000011942	-	99	73.699	ENSCAFG00020013581	ELAVL4	98	73.699	Canis_lupus_dingo
ENSCAPG00000011942	-	99	71.588	ENSCHIG00000002038	ELAVL4	98	71.588	Capra_hircus
ENSCAPG00000011942	-	70	67.054	ENSTSYG00000004130	ELAVL4	94	68.000	Carlito_syrichta
ENSCAPG00000011942	-	100	91.589	ENSCPOG00000022816	-	100	91.589	Cavia_porcellus
ENSCAPG00000011942	-	99	73.699	ENSCPOG00000002044	-	97	73.699	Cavia_porcellus
ENSCAPG00000011942	-	99	73.121	ENSCCAG00000024797	ELAVL4	98	73.121	Cebus_capucinus
ENSCAPG00000011942	-	99	73.410	ENSCATG00000029867	ELAVL4	97	73.410	Cercocebus_atys
ENSCAPG00000011942	-	99	71.588	ENSCLAG00000005476	ELAVL4	98	71.588	Chinchilla_lanigera
ENSCAPG00000011942	-	99	71.309	ENSCSAG00000001257	ELAVL4	98	71.309	Chlorocebus_sabaeus
ENSCAPG00000011942	-	99	68.280	ENSCHOG00000002464	ELAVL4	97	68.280	Choloepus_hoffmanni
ENSCAPG00000011942	-	99	72.543	ENSCPBG00000010017	ELAVL4	99	70.474	Chrysemys_picta_bellii
ENSCAPG00000011942	-	89	31.962	ENSCING00000009052	-	100	32.881	Ciona_intestinalis
ENSCAPG00000011942	-	99	73.410	ENSCANG00000043683	ELAVL4	100	73.410	Colobus_angolensis_palliatus
ENSCAPG00000011942	-	99	73.699	ENSCGRG00001020348	Elavl4	97	73.699	Cricetulus_griseus_chok1gshd
ENSCAPG00000011942	-	99	73.699	ENSCGRG00000009162	Elavl4	99	73.699	Cricetulus_griseus_crigri
ENSCAPG00000011942	-	99	68.391	ENSCSEG00000020141	elavl4	95	66.482	Cynoglossus_semilaevis
ENSCAPG00000011942	-	99	68.376	ENSCVAG00000019080	elavl4	97	68.376	Cyprinodon_variegatus
ENSCAPG00000011942	-	99	70.231	ENSDARG00000045639	elavl4	88	70.231	Danio_rerio
ENSCAPG00000011942	-	99	71.588	ENSDNOG00000033502	ELAVL4	97	71.588	Dasypus_novemcinctus
ENSCAPG00000011942	-	99	73.699	ENSDORG00000012729	Elavl4	97	73.699	Dipodomys_ordii
ENSCAPG00000011942	-	99	64.075	ENSETEG00000013779	ELAVL4	99	64.075	Echinops_telfairi
ENSCAPG00000011942	-	99	71.309	ENSEASG00005010728	ELAVL4	98	71.309	Equus_asinus_asinus
ENSCAPG00000011942	-	99	73.410	ENSECAG00000022284	ELAVL4	97	73.410	Equus_caballus
ENSCAPG00000011942	-	99	68.901	ENSEEUG00000008766	ELAVL4	97	69.169	Erinaceus_europaeus
ENSCAPG00000011942	-	99	70.231	ENSELUG00000008025	elavl4	91	70.231	Esox_lucius
ENSCAPG00000011942	-	99	73.699	ENSFCAG00000010438	ELAVL4	98	71.588	Felis_catus
ENSCAPG00000011942	-	99	70.474	ENSFALG00000005331	ELAVL4	97	70.474	Ficedula_albicollis
ENSCAPG00000011942	-	99	73.699	ENSFDAG00000014507	ELAVL4	99	73.699	Fukomys_damarensis
ENSCAPG00000011942	-	99	67.036	ENSFHEG00000004530	elavl4	91	67.036	Fundulus_heteroclitus
ENSCAPG00000011942	-	99	68.245	ENSGMOG00000006515	elavl4	100	68.245	Gadus_morhua
ENSCAPG00000011942	-	99	72.543	ENSGALG00000010533	ELAVL4	97	72.543	Gallus_gallus
ENSCAPG00000011942	-	99	60.511	ENSGAFG00000015956	elavl4	92	60.511	Gambusia_affinis
ENSCAPG00000011942	-	99	66.205	ENSGACG00000011152	elavl4	100	66.205	Gasterosteus_aculeatus
ENSCAPG00000011942	-	99	70.474	ENSGAGG00000018269	ELAVL4	98	69.399	Gopherus_agassizii
ENSCAPG00000011942	-	99	73.410	ENSGGOG00000000634	ELAVL4	97	73.410	Gorilla_gorilla
ENSCAPG00000011942	-	99	68.391	ENSHBUG00000009691	elavl4	95	66.482	Haplochromis_burtoni
ENSCAPG00000011942	-	99	73.410	ENSHGLG00000000485	ELAVL4	97	73.410	Heterocephalus_glaber_female
ENSCAPG00000011942	-	99	73.410	ENSHGLG00100002567	ELAVL4	99	73.410	Heterocephalus_glaber_male
ENSCAPG00000011942	-	99	66.759	ENSHCOG00000002490	elavl4	100	66.759	Hippocampus_comes
ENSCAPG00000011942	-	99	70.231	ENSIPUG00000001381	elavl4	91	70.231	Ictalurus_punctatus
ENSCAPG00000011942	-	99	73.699	ENSSTOG00000027271	ELAVL4	97	73.699	Ictidomys_tridecemlineatus
ENSCAPG00000011942	-	99	73.699	ENSJJAG00000023099	Elavl4	97	73.699	Jaculus_jaculus
ENSCAPG00000011942	-	99	68.091	ENSKMAG00000022289	elavl4	91	66.209	Kryptolebias_marmoratus
ENSCAPG00000011942	-	99	66.758	ENSLBEG00000007096	elavl4	91	63.780	Labrus_bergylta
ENSCAPG00000011942	-	99	69.916	ENSLACG00000008316	ELAVL4	97	69.916	Latimeria_chalumnae
ENSCAPG00000011942	-	99	68.524	ENSLOCG00000009363	elavl4	88	68.524	Lepisosteus_oculatus
ENSCAPG00000011942	-	99	68.901	ENSLAFG00000001087	ELAVL4	100	71.368	Loxodonta_africana
ENSCAPG00000011942	-	99	73.410	ENSMFAG00000039866	ELAVL4	97	73.410	Macaca_fascicularis
ENSCAPG00000011942	-	99	73.410	ENSMMUG00000021933	ELAVL4	98	73.410	Macaca_mulatta
ENSCAPG00000011942	-	99	73.121	ENSMNEG00000035576	ELAVL4	98	71.031	Macaca_nemestrina
ENSCAPG00000011942	-	99	73.410	ENSMLEG00000028616	ELAVL4	97	73.410	Mandrillus_leucophaeus
ENSCAPG00000011942	-	99	66.482	ENSMAMG00000004000	elavl4	98	66.482	Mastacembelus_armatus
ENSCAPG00000011942	-	99	68.391	ENSMZEG00005010690	elavl4	91	66.482	Maylandia_zebra
ENSCAPG00000011942	-	99	70.278	ENSMGAG00000010928	ELAVL4	97	70.278	Meleagris_gallopavo
ENSCAPG00000011942	-	99	73.699	ENSMAUG00000021566	Elavl4	97	73.699	Mesocricetus_auratus
ENSCAPG00000011942	-	99	73.410	ENSMICG00000003286	ELAVL4	100	71.309	Microcebus_murinus
ENSCAPG00000011942	-	99	73.699	ENSMOCG00000010309	Elavl4	97	73.699	Microtus_ochrogaster
ENSCAPG00000011942	-	99	66.482	ENSMMOG00000020264	elavl4	93	66.482	Mola_mola
ENSCAPG00000011942	-	100	48.105	ENSMODG00000003850	-	100	49.249	Monodelphis_domestica
ENSCAPG00000011942	-	78	70.290	ENSMODG00000001300	-	96	70.290	Monodelphis_domestica
ENSCAPG00000011942	-	99	68.391	ENSMALG00000016432	elavl4	95	66.482	Monopterus_albus
ENSCAPG00000011942	-	99	73.699	MGP_CAROLIEiJ_G0026289	Elavl4	96	78.788	Mus_caroli
ENSCAPG00000011942	-	99	73.699	ENSMUSG00000028546	Elavl4	96	78.788	Mus_musculus
ENSCAPG00000011942	-	99	73.699	MGP_PahariEiJ_G0028622	Elavl4	96	78.788	Mus_pahari
ENSCAPG00000011942	-	99	73.699	MGP_SPRETEiJ_G0027258	Elavl4	96	78.788	Mus_spretus
ENSCAPG00000011942	-	99	68.901	ENSMPUG00000007192	ELAVL4	98	68.901	Mustela_putorius_furo
ENSCAPG00000011942	-	99	71.588	ENSMLUG00000006226	ELAVL4	97	71.588	Myotis_lucifugus
ENSCAPG00000011942	-	99	73.410	ENSNGAG00000023123	Elavl4	97	73.410	Nannospalax_galili
ENSCAPG00000011942	-	99	73.410	ENSNLEG00000016303	ELAVL4	100	73.410	Nomascus_leucogenys
ENSCAPG00000011942	-	99	67.742	ENSMEUG00000007145	ELAVL4	99	67.742	Notamacropus_eugenii
ENSCAPG00000011942	-	99	68.901	ENSOPRG00000015300	ELAVL4	97	68.901	Ochotona_princeps
ENSCAPG00000011942	-	99	73.699	ENSODEG00000006770	ELAVL4	99	73.699	Octodon_degus
ENSCAPG00000011942	-	99	66.482	ENSONIG00000002360	elavl4	97	66.482	Oreochromis_niloticus
ENSCAPG00000011942	-	65	69.697	ENSOANG00000007377	ELAVL4	100	69.697	Ornithorhynchus_anatinus
ENSCAPG00000011942	-	99	71.588	ENSOCUG00000016262	ELAVL4	92	71.588	Oryctolagus_cuniculus
ENSCAPG00000011942	-	99	67.898	ENSORLG00000028487	elavl4	91	66.027	Oryzias_latipes
ENSCAPG00000011942	-	99	68.678	ENSORLG00020014277	elavl4	91	66.759	Oryzias_latipes_hni
ENSCAPG00000011942	-	99	68.678	ENSORLG00015010143	elavl4	91	66.759	Oryzias_latipes_hsok
ENSCAPG00000011942	-	99	67.806	ENSOMEG00000009988	elavl4	91	67.806	Oryzias_melastigma
ENSCAPG00000011942	-	99	71.309	ENSOGAG00000016990	ELAVL4	97	71.309	Otolemur_garnettii
ENSCAPG00000011942	-	99	71.588	ENSOARG00000004264	ELAVL4	97	71.588	Ovis_aries
ENSCAPG00000011942	-	99	73.410	ENSPPAG00000042402	ELAVL4	97	73.410	Pan_paniscus
ENSCAPG00000011942	-	99	71.588	ENSPPRG00000002764	ELAVL4	98	71.588	Panthera_pardus
ENSCAPG00000011942	-	99	71.588	ENSPTIG00000016727	ELAVL4	98	71.588	Panthera_tigris_altaica
ENSCAPG00000011942	-	99	73.410	ENSPTRG00000000723	ELAVL4	100	73.410	Pan_troglodytes
ENSCAPG00000011942	-	99	73.410	ENSPANG00000017754	ELAVL4	97	73.410	Papio_anubis
ENSCAPG00000011942	-	99	70.231	ENSPKIG00000006999	elavl4	96	68.245	Paramormyrops_kingsleyae
ENSCAPG00000011942	-	99	70.195	ENSPSIG00000008545	ELAVL4	98	70.195	Pelodiscus_sinensis
ENSCAPG00000011942	-	99	67.036	ENSPMGG00000022175	elavl4	98	67.036	Periophthalmus_magnuspinnatus
ENSCAPG00000011942	-	99	57.650	ENSPEMG00000021058	Elavl3	98	57.650	Peromyscus_maniculatus_bairdii
ENSCAPG00000011942	-	90	49.216	ENSPCIG00000017116	-	92	49.216	Phascolarctos_cinereus
ENSCAPG00000011942	-	99	66.759	ENSPFOG00000004811	elavl4	99	69.048	Poecilia_formosa
ENSCAPG00000011942	-	99	66.759	ENSPLAG00000008085	elavl4	98	66.759	Poecilia_latipinna
ENSCAPG00000011942	-	99	68.678	ENSPMEG00000015619	elavl4	88	68.678	Poecilia_mexicana
ENSCAPG00000011942	-	99	68.678	ENSPREG00000018937	elavl4	95	66.759	Poecilia_reticulata
ENSCAPG00000011942	-	99	71.031	ENSPPYG00000001367	ELAVL4	97	71.031	Pongo_abelii
ENSCAPG00000011942	-	99	68.901	ENSPCAG00000008215	ELAVL4	97	68.901	Procavia_capensis
ENSCAPG00000011942	-	99	73.547	ENSPCOG00000024957	ELAVL4	97	73.547	Propithecus_coquereli
ENSCAPG00000011942	-	93	75.918	ENSPVAG00000003632	ELAVL4	81	75.918	Pteropus_vampyrus
ENSCAPG00000011942	-	99	66.482	ENSPNYG00000021720	elavl4	98	66.482	Pundamilia_nyererei
ENSCAPG00000011942	-	99	69.942	ENSPNAG00000017169	elavl4	95	67.967	Pygocentrus_nattereri
ENSCAPG00000011942	-	99	68.901	ENSRNOG00000023601	Elavl4	97	68.901	Rattus_norvegicus
ENSCAPG00000011942	-	99	73.410	ENSRBIG00000043810	ELAVL4	97	73.410	Rhinopithecus_bieti
ENSCAPG00000011942	-	99	73.410	ENSRROG00000044786	ELAVL4	100	73.410	Rhinopithecus_roxellana
ENSCAPG00000011942	-	99	73.121	ENSSBOG00000022965	ELAVL4	98	73.121	Saimiri_boliviensis_boliviensis
ENSCAPG00000011942	-	95	49.118	ENSSHAG00000001657	-	94	49.118	Sarcophilus_harrisii
ENSCAPG00000011942	-	99	70.195	ENSSHAG00000013832	-	98	70.195	Sarcophilus_harrisii
ENSCAPG00000011942	-	99	70.231	ENSSFOG00015015838	elavl4	95	68.245	Scleropages_formosus
ENSCAPG00000011942	-	99	67.036	ENSSMAG00000006881	elavl4	95	66.758	Scophthalmus_maximus
ENSCAPG00000011942	-	99	66.482	ENSSDUG00000000045	elavl4	90	66.482	Seriola_dumerili
ENSCAPG00000011942	-	99	68.391	ENSSLDG00000005260	elavl4	91	66.482	Seriola_lalandi_dorsalis
ENSCAPG00000011942	-	99	69.169	ENSSARG00000010733	ELAVL4	99	69.169	Sorex_araneus
ENSCAPG00000011942	-	99	70.195	ENSSPUG00000011636	ELAVL4	100	70.195	Sphenodon_punctatus
ENSCAPG00000011942	-	99	66.482	ENSSPAG00000018867	elavl4	96	66.482	Stegastes_partitus
ENSCAPG00000011942	-	99	73.699	ENSSSCG00000037291	ELAVL4	97	71.588	Sus_scrofa
ENSCAPG00000011942	-	99	70.474	ENSTGUG00000008597	ELAVL4	99	70.474	Taeniopygia_guttata
ENSCAPG00000011942	-	99	66.205	ENSTRUG00000000523	elavl4	98	66.205	Takifugu_rubripes
ENSCAPG00000011942	-	99	65.928	ENSTNIG00000015485	elavl4	97	65.928	Tetraodon_nigroviridis
ENSCAPG00000011942	-	99	78.395	ENSTBEG00000011730	ELAVL4	71	78.395	Tupaia_belangeri
ENSCAPG00000011942	-	83	78.378	ENSTTRG00000012441	ELAVL4	54	78.378	Tursiops_truncatus
ENSCAPG00000011942	-	99	73.699	ENSUAMG00000013026	ELAVL4	97	73.699	Ursus_americanus
ENSCAPG00000011942	-	99	73.699	ENSUMAG00000023149	ELAVL4	98	73.699	Ursus_maritimus
ENSCAPG00000011942	-	99	68.901	ENSVPAG00000011606	ELAVL4	97	68.901	Vicugna_pacos
ENSCAPG00000011942	-	99	73.699	ENSVVUG00000006175	ELAVL4	98	73.699	Vulpes_vulpes
ENSCAPG00000011942	-	99	64.948	ENSXETG00000008680	elavl4	99	64.948	Xenopus_tropicalis
ENSCAPG00000011942	-	99	68.678	ENSXMAG00000025683	elavl4	95	66.759	Xiphophorus_maculatus