EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000012045 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Minus strand
Length: 5201 bases
Position: chrAVPZ01000111.1:33417521-33422721
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000010861	RRM_1	PF00076.22	1.7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000014597	-	708	-	ENSCAPP00000010861	235 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000012045's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000012045's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000012045	-	100	87.234	ENSG00000076053	RBM7	100	82.192	Homo_sapiens
ENSCAPG00000012045	-	98	37.759	ENSAPOG00000012768	rbm7	87	36.864	Acanthochromis_polyacanthus
ENSCAPG00000012045	-	100	85.957	ENSAMEG00000013276	-	88	85.957	Ailuropoda_melanoleuca
ENSCAPG00000012045	-	98	37.549	ENSAOCG00000004178	rbm7	87	36.515	Amphiprion_ocellaris
ENSCAPG00000012045	-	52	50.000	ENSAPEG00000021981	rbm7	87	36.515	Amphiprion_percula
ENSCAPG00000012045	-	95	56.522	ENSAPLG00000005180	-	99	56.522	Anas_platyrhynchos
ENSCAPG00000012045	-	100	44.882	ENSACAG00000011589	-	88	46.063	Anolis_carolinensis
ENSCAPG00000012045	-	52	91.870	ENSANAG00000031340	-	79	91.870	Aotus_nancymaae
ENSCAPG00000012045	-	98	44.400	ENSAMXG00000037251	rbm7	88	42.915	Astyanax_mexicanus
ENSCAPG00000012045	-	100	86.383	ENSBTAG00000008219	RBM7	88	85.957	Bos_taurus
ENSCAPG00000012045	-	100	85.532	ENSCJAG00000011949	-	88	86.809	Callithrix_jacchus
ENSCAPG00000012045	-	100	83.404	ENSCAFG00000013514	-	88	84.255	Canis_familiaris
ENSCAPG00000012045	-	100	83.404	ENSCAFG00020002518	-	88	84.255	Canis_lupus_dingo
ENSCAPG00000012045	-	100	85.106	ENSCHIG00000010879	-	88	84.681	Capra_hircus
ENSCAPG00000012045	-	100	85.106	ENSCHIG00000008632	-	88	84.681	Capra_hircus
ENSCAPG00000012045	-	100	85.532	ENSTSYG00000013731	-	88	85.532	Carlito_syrichta
ENSCAPG00000012045	-	100	99.149	ENSCPOG00000034273	-	98	99.149	Cavia_porcellus
ENSCAPG00000012045	-	100	86.809	ENSCCAG00000036534	-	88	88.085	Cebus_capucinus
ENSCAPG00000012045	-	100	88.511	ENSCATG00000037361	-	88	88.511	Cercocebus_atys
ENSCAPG00000012045	-	100	89.451	ENSCLAG00000014875	-	88	89.030	Chinchilla_lanigera
ENSCAPG00000012045	-	100	88.186	ENSCSAG00000002756	-	88	88.186	Chlorocebus_sabaeus
ENSCAPG00000012045	-	100	52.560	ENSCPBG00000009366	-	90	52.560	Chrysemys_picta_bellii
ENSCAPG00000012045	-	100	88.511	ENSCANG00000031398	-	88	88.511	Colobus_angolensis_palliatus
ENSCAPG00000012045	-	100	84.255	ENSCGRG00001019236	Rbm7	88	84.255	Cricetulus_griseus_chok1gshd
ENSCAPG00000012045	-	100	83.830	ENSCGRG00000005045	Rbm7	88	83.830	Cricetulus_griseus_crigri
ENSCAPG00000012045	-	99	37.255	ENSCVAG00000023415	rbm7	83	36.000	Cyprinodon_variegatus
ENSCAPG00000012045	-	98	39.834	ENSDARG00000020841	rbm7	87	40.083	Danio_rerio
ENSCAPG00000012045	-	100	88.511	ENSDNOG00000018423	-	88	88.511	Dasypus_novemcinctus
ENSCAPG00000012045	-	100	85.106	ENSDORG00000029149	Rbm7	88	85.106	Dipodomys_ordii
ENSCAPG00000012045	-	100	75.847	ENSETEG00000015869	-	88	75.847	Echinops_telfairi
ENSCAPG00000012045	-	100	88.085	ENSEASG00005006676	-	88	88.085	Equus_asinus_asinus
ENSCAPG00000012045	-	100	88.085	ENSECAG00000004636	-	88	88.511	Equus_caballus
ENSCAPG00000012045	-	98	72.174	ENSEEUG00000015854	-	86	72.174	Erinaceus_europaeus
ENSCAPG00000012045	-	98	40.800	ENSELUG00000017868	rbm7	87	41.736	Esox_lucius
ENSCAPG00000012045	-	100	85.957	ENSFCAG00000040484	-	88	85.532	Felis_catus
ENSCAPG00000012045	-	100	47.967	ENSFALG00000010039	-	77	47.967	Ficedula_albicollis
ENSCAPG00000012045	-	98	89.130	ENSFDAG00000010616	-	87	89.130	Fukomys_damarensis
ENSCAPG00000012045	-	89	36.449	ENSGMOG00000013362	rbm7	77	35.586	Gadus_morhua
ENSCAPG00000012045	-	100	49.225	ENSGALG00000007017	RBM7	89	47.104	Gallus_gallus
ENSCAPG00000012045	-	52	50.781	ENSGACG00000006628	rbm7	65	43.258	Gasterosteus_aculeatus
ENSCAPG00000012045	-	100	56.506	ENSGAGG00000021127	-	89	56.506	Gopherus_agassizii
ENSCAPG00000012045	-	50	84.746	ENSGGOG00000009941	-	53	83.898	Gorilla_gorilla
ENSCAPG00000012045	-	100	83.404	ENSHGLG00000014428	-	87	83.404	Heterocephalus_glaber_female
ENSCAPG00000012045	-	100	91.489	ENSHGLG00000018700	RBM7	88	91.915	Heterocephalus_glaber_female
ENSCAPG00000012045	-	100	85.957	ENSHGLG00000016655	-	90	86.383	Heterocephalus_glaber_female
ENSCAPG00000012045	-	51	71.429	ENSHGLG00000013918	-	74	68.067	Heterocephalus_glaber_female
ENSCAPG00000012045	-	100	80.591	ENSHGLG00000002486	-	83	81.013	Heterocephalus_glaber_female
ENSCAPG00000012045	-	100	80.591	ENSHGLG00100011792	-	83	81.013	Heterocephalus_glaber_male
ENSCAPG00000012045	-	100	85.957	ENSHGLG00100009317	-	90	86.383	Heterocephalus_glaber_male
ENSCAPG00000012045	-	100	83.404	ENSHGLG00100011703	-	87	83.404	Heterocephalus_glaber_male
ENSCAPG00000012045	-	100	91.064	ENSHGLG00100005358	-	88	91.489	Heterocephalus_glaber_male
ENSCAPG00000012045	-	100	60.000	ENSHGLG00100005739	-	80	61.702	Heterocephalus_glaber_male
ENSCAPG00000012045	-	51	71.429	ENSHGLG00100015249	-	74	68.067	Heterocephalus_glaber_male
ENSCAPG00000012045	-	98	42.917	ENSIPUG00000009397	rbm7	87	43.750	Ictalurus_punctatus
ENSCAPG00000012045	-	99	71.795	ENSSTOG00000031973	-	90	71.368	Ictidomys_tridecemlineatus
ENSCAPG00000012045	-	94	88.182	ENSSTOG00000012459	-	88	88.636	Ictidomys_tridecemlineatus
ENSCAPG00000012045	-	100	90.638	ENSJJAG00000011823	-	88	90.638	Jaculus_jaculus
ENSCAPG00000012045	-	100	80.000	ENSJJAG00000016540	-	87	80.000	Jaculus_jaculus
ENSCAPG00000012045	-	98	35.081	ENSLBEG00000024902	rbm7	87	34.728	Labrus_bergylta
ENSCAPG00000012045	-	99	55.372	ENSLACG00000018620	-	88	55.372	Latimeria_chalumnae
ENSCAPG00000012045	-	100	42.913	ENSLOCG00000002408	rbm7	89	45.020	Lepisosteus_oculatus
ENSCAPG00000012045	-	100	79.661	ENSLAFG00000012444	-	88	79.661	Loxodonta_africana
ENSCAPG00000012045	-	100	88.936	ENSMFAG00000000965	-	88	88.936	Macaca_fascicularis
ENSCAPG00000012045	-	100	88.936	ENSMMUG00000012270	RBM7	90	88.936	Macaca_mulatta
ENSCAPG00000012045	-	100	88.936	ENSMNEG00000005397	-	88	88.936	Macaca_nemestrina
ENSCAPG00000012045	-	100	88.511	ENSMLEG00000041953	-	88	88.511	Mandrillus_leucophaeus
ENSCAPG00000012045	-	98	39.044	ENSMAMG00000014145	rbm7	87	38.618	Mastacembelus_armatus
ENSCAPG00000012045	-	100	51.953	ENSMGAG00000003004	-	88	51.172	Meleagris_gallopavo
ENSCAPG00000012045	-	100	82.553	ENSMAUG00000001942	-	88	82.553	Mesocricetus_auratus
ENSCAPG00000012045	-	100	86.777	ENSMICG00000042981	-	88	87.190	Microcebus_murinus
ENSCAPG00000012045	-	100	83.404	ENSMOCG00000009674	Rbm7	88	83.404	Microtus_ochrogaster
ENSCAPG00000012045	-	50	52.459	ENSMMOG00000004967	rbm7	85	35.918	Mola_mola
ENSCAPG00000012045	-	100	72.245	ENSMODG00000013918	-	88	71.429	Monodelphis_domestica
ENSCAPG00000012045	-	100	83.051	MGP_CAROLIEiJ_G0032167	Rbm7	88	83.051	Mus_caroli
ENSCAPG00000012045	-	100	83.830	ENSMUSG00000042396	Rbm7	88	83.830	Mus_musculus
ENSCAPG00000012045	-	100	84.255	MGP_PahariEiJ_G0015035	Rbm7	88	84.255	Mus_pahari
ENSCAPG00000012045	-	100	81.702	MGP_SPRETEiJ_G0033306	Rbm7	88	81.702	Mus_spretus
ENSCAPG00000012045	-	100	84.255	ENSMPUG00000003941	-	88	85.532	Mustela_putorius_furo
ENSCAPG00000012045	-	99	82.051	ENSMLUG00000023234	-	87	82.051	Myotis_lucifugus
ENSCAPG00000012045	-	100	85.106	ENSNGAG00000006244	-	88	85.106	Nannospalax_galili
ENSCAPG00000012045	-	100	88.511	ENSNLEG00000029494	-	88	88.511	Nomascus_leucogenys
ENSCAPG00000012045	-	100	61.603	ENSMEUG00000006187	-	88	61.603	Notamacropus_eugenii
ENSCAPG00000012045	-	100	80.426	ENSOPRG00000011060	-	88	80.426	Ochotona_princeps
ENSCAPG00000012045	-	100	68.085	ENSODEG00000016844	-	86	68.085	Octodon_degus
ENSCAPG00000012045	-	98	66.957	ENSODEG00000000186	-	82	67.391	Octodon_degus
ENSCAPG00000012045	-	100	69.959	ENSOANG00000001755	-	83	69.959	Ornithorhynchus_anatinus
ENSCAPG00000012045	-	100	90.213	ENSOCUG00000003342	-	88	90.213	Oryctolagus_cuniculus
ENSCAPG00000012045	-	52	51.969	ENSORLG00015000536	rbm7	55	41.714	Oryzias_latipes_hsok
ENSCAPG00000012045	-	100	90.213	ENSOGAG00000016857	-	88	90.213	Otolemur_garnettii
ENSCAPG00000012045	-	100	85.957	ENSOARG00000000924	-	87	85.532	Ovis_aries
ENSCAPG00000012045	-	100	87.660	ENSPPAG00000027572	-	88	87.660	Pan_paniscus
ENSCAPG00000012045	-	100	86.809	ENSPPRG00000004372	-	88	87.234	Panthera_pardus
ENSCAPG00000012045	-	100	86.809	ENSPTIG00000013512	-	88	87.234	Panthera_tigris_altaica
ENSCAPG00000012045	-	100	87.660	ENSPTRG00000004305	RBM7	88	87.660	Pan_troglodytes
ENSCAPG00000012045	-	94	85.586	ENSPTRG00000049329	-	88	86.036	Pan_troglodytes
ENSCAPG00000012045	-	100	88.085	ENSPANG00000009431	-	88	88.085	Papio_anubis
ENSCAPG00000012045	-	98	47.899	ENSPKIG00000016648	rbm7	87	47.458	Paramormyrops_kingsleyae
ENSCAPG00000012045	-	51	45.528	ENSPMGG00000001523	rbm7	61	62.963	Periophthalmus_magnuspinnatus
ENSCAPG00000012045	-	99	75.966	ENSPEMG00000011553	-	87	75.966	Peromyscus_maniculatus_bairdii
ENSCAPG00000012045	-	100	73.361	ENSPCIG00000011225	-	74	73.361	Phascolarctos_cinereus
ENSCAPG00000012045	-	100	86.809	ENSPPYG00000003894	-	88	86.809	Pongo_abelii
ENSCAPG00000012045	-	100	69.620	ENSPCAG00000003270	-	100	68.776	Procavia_capensis
ENSCAPG00000012045	-	100	88.085	ENSPVAG00000005294	-	88	88.085	Pteropus_vampyrus
ENSCAPG00000012045	-	98	41.909	ENSPNAG00000012813	rbm7	87	41.909	Pygocentrus_nattereri
ENSCAPG00000012045	-	100	88.936	ENSRBIG00000044762	-	88	88.936	Rhinopithecus_bieti
ENSCAPG00000012045	-	100	88.936	ENSRROG00000032280	-	88	88.936	Rhinopithecus_roxellana
ENSCAPG00000012045	-	100	83.830	ENSSBOG00000027830	-	88	85.106	Saimiri_boliviensis_boliviensis
ENSCAPG00000012045	-	100	73.770	ENSSHAG00000008426	-	88	73.770	Sarcophilus_harrisii
ENSCAPG00000012045	-	98	44.130	ENSSFOG00015008458	rbm7	87	45.378	Scleropages_formosus
ENSCAPG00000012045	-	98	39.442	ENSSMAG00000003040	rbm7	87	38.211	Scophthalmus_maximus
ENSCAPG00000012045	-	52	50.794	ENSSDUG00000005361	rbm7	87	35.685	Seriola_dumerili
ENSCAPG00000012045	-	52	50.794	ENSSLDG00000003221	rbm7	87	35.685	Seriola_lalandi_dorsalis
ENSCAPG00000012045	-	100	54.015	ENSSPUG00000006032	-	99	56.000	Sphenodon_punctatus
ENSCAPG00000012045	-	52	50.000	ENSSPAG00000019320	rbm7	87	36.437	Stegastes_partitus
ENSCAPG00000012045	-	100	87.660	ENSSSCG00000027905	-	88	87.234	Sus_scrofa
ENSCAPG00000012045	-	100	44.531	ENSTGUG00000000117	-	88	44.531	Taeniopygia_guttata
ENSCAPG00000012045	-	100	74.043	ENSTBEG00000008650	-	88	74.043	Tupaia_belangeri
ENSCAPG00000012045	-	100	87.660	ENSTTRG00000001515	-	88	87.660	Tursiops_truncatus
ENSCAPG00000012045	-	100	86.383	ENSUAMG00000019095	-	88	86.809	Ursus_americanus
ENSCAPG00000012045	-	100	86.383	ENSUMAG00000003774	-	88	86.809	Ursus_maritimus
ENSCAPG00000012045	-	100	89.362	ENSVPAG00000006300	-	88	89.362	Vicugna_pacos
ENSCAPG00000012045	-	96	49.362	ENSXETG00000012654	rbm7	88	52.743	Xenopus_tropicalis
ENSCAPG00000012045	-	97	35.417	ENSXMAG00000000970	rbm7	81	34.746	Xiphophorus_maculatus