EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAPG00000012135 (Gene tree)
Gene ID: -
Gene Symbol: SALL4
Alias: ZNF797|dJ1112F19.1
Full Name: spalt like transcription factor 4
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 6782 bases
Position: chrAVPZ01000966.1:4712346-4719127
Accession: 15924
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000010983	zf-C2H2	PF00096.26	4.8e-27	1	5
ENSCAPP00000010983	zf-C2H2	PF00096.26	4.8e-27	2	5
ENSCAPP00000010983	zf-C2H2	PF00096.26	4.8e-27	3	5
ENSCAPP00000010983	zf-C2H2	PF00096.26	4.8e-27	4	5
ENSCAPP00000010983	zf-C2H2	PF00096.26	4.8e-27	5	5
ENSCAPP00000010983	zf-met	PF12874.7	1.3e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000014719	SALL4-201	3105	-	ENSCAPP00000010983	1034 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000012135's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000012135's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAPG00000012135	SALL4	60	83.478	ENSCAPG00000006496	SALL3	73	61.538
ENSCAPG00000012135	SALL4	55	53.061	ENSCAPG00000003129	-	73	53.061
ENSCAPG00000012135	SALL4	54	47.170	ENSCAPG00000002667	-	80	42.857
ENSCAPG00000012135	SALL4	52	41.818	ENSCAPG00000006920	-	76	43.396
ENSCAPG00000012135	SALL4	52	42.308	ENSCAPG00000015217	PRDM5	76	50.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000012135	SALL4	97	80.864	ENSG00000101115	SALL4	99	86.207	Homo_sapiens
ENSCAPG00000012135	SALL4	98	43.253	ENSAPOG00000002465	sall4	99	42.921	Acanthochromis_polyacanthus
ENSCAPG00000012135	SALL4	97	79.941	ENSAMEG00000013250	-	100	78.189	Ailuropoda_melanoleuca
ENSCAPG00000012135	SALL4	98	41.844	ENSACIG00000017298	sall4	99	41.526	Amphilophus_citrinellus
ENSCAPG00000012135	SALL4	95	44.659	ENSAOCG00000023678	sall4	97	44.311	Amphiprion_ocellaris
ENSCAPG00000012135	SALL4	95	44.434	ENSAPEG00000000751	sall4	97	44.033	Amphiprion_percula
ENSCAPG00000012135	SALL4	95	42.949	ENSATEG00000024480	sall4	97	42.202	Anabas_testudineus
ENSCAPG00000012135	SALL4	97	53.909	ENSAPLG00000006498	SALL4	98	54.364	Anas_platyrhynchos
ENSCAPG00000012135	SALL4	96	53.952	ENSACAG00000012748	SALL4	96	53.797	Anolis_carolinensis
ENSCAPG00000012135	SALL4	97	80.826	ENSANAG00000023352	SALL4	99	78.040	Aotus_nancymaae
ENSCAPG00000012135	SALL4	96	43.431	ENSACLG00000017851	sall4	98	42.648	Astatotilapia_calliptera
ENSCAPG00000012135	SALL4	95	45.644	ENSAMXG00000001254	sall4	99	46.020	Astyanax_mexicanus
ENSCAPG00000012135	SALL4	97	75.220	ENSBTAG00000003101	SALL4	96	74.902	Bos_taurus
ENSCAPG00000012135	SALL4	81	81.287	ENSCJAG00000000591	SALL4	99	81.287	Callithrix_jacchus
ENSCAPG00000012135	SALL4	97	80.296	ENSCAFG00000011738	-	99	77.337	Canis_familiaris
ENSCAPG00000012135	SALL4	97	80.197	ENSCAFG00020021870	SALL4	99	77.243	Canis_lupus_dingo
ENSCAPG00000012135	SALL4	96	75.000	ENSCHIG00000026270	SALL4	96	74.294	Capra_hircus
ENSCAPG00000012135	SALL4	99	75.614	ENSTSYG00000007359	SALL4	99	85.776	Carlito_syrichta
ENSCAPG00000012135	SALL4	97	76.059	ENSCCAG00000029512	-	96	76.059	Cebus_capucinus
ENSCAPG00000012135	SALL4	99	78.491	ENSCATG00000030757	SALL4	99	78.754	Cercocebus_atys
ENSCAPG00000012135	SALL4	99	81.887	ENSCLAG00000010479	SALL4	99	81.981	Chinchilla_lanigera
ENSCAPG00000012135	SALL4	99	78.396	ENSCSAG00000015269	SALL4	99	78.491	Chlorocebus_sabaeus
ENSCAPG00000012135	SALL4	97	53.749	ENSCPBG00000014995	SALL4	99	54.839	Chrysemys_picta_bellii
ENSCAPG00000012135	SALL4	99	78.491	ENSCANG00000036463	SALL4	99	78.585	Colobus_angolensis_palliatus
ENSCAPG00000012135	SALL4	97	72.957	ENSCGRG00001019569	Sall4	97	79.237	Cricetulus_griseus_chok1gshd
ENSCAPG00000012135	SALL4	97	72.860	ENSCGRG00000000462	Sall4	99	82.500	Cricetulus_griseus_crigri
ENSCAPG00000012135	SALL4	96	43.199	ENSCSEG00000014604	sall4	98	43.054	Cynoglossus_semilaevis
ENSCAPG00000012135	SALL4	95	44.879	ENSCVAG00000010815	sall4	97	44.424	Cyprinodon_variegatus
ENSCAPG00000012135	SALL4	96	45.594	ENSDARG00000044485	sall4	98	45.815	Danio_rerio
ENSCAPG00000012135	SALL4	99	76.177	ENSDNOG00000040633	SALL4	99	76.177	Dasypus_novemcinctus
ENSCAPG00000012135	SALL4	97	70.129	ENSDORG00000012841	Sall4	94	87.912	Dipodomys_ordii
ENSCAPG00000012135	SALL4	76	69.256	ENSETEG00000012475	-	66	69.256	Echinops_telfairi
ENSCAPG00000012135	SALL4	97	80.197	ENSECAG00000018533	SALL4	96	80.157	Equus_caballus
ENSCAPG00000012135	SALL4	97	75.347	ENSEEUG00000003649	SALL4	99	72.788	Erinaceus_europaeus
ENSCAPG00000012135	SALL4	95	44.284	ENSELUG00000005696	sall4	99	44.083	Esox_lucius
ENSCAPG00000012135	SALL4	97	78.137	ENSFCAG00000002822	SALL4	97	85.408	Felis_catus
ENSCAPG00000012135	SALL4	98	53.387	ENSFALG00000013149	SALL4	99	54.667	Ficedula_albicollis
ENSCAPG00000012135	SALL4	99	79.717	ENSFDAG00000017812	SALL4	96	81.943	Fukomys_damarensis
ENSCAPG00000012135	SALL4	97	44.846	ENSFHEG00000014187	sall4	98	44.555	Fundulus_heteroclitus
ENSCAPG00000012135	SALL4	95	42.621	ENSGMOG00000003822	sall4	97	42.726	Gadus_morhua
ENSCAPG00000012135	SALL4	97	53.117	ENSGALG00000041365	SALL4	99	54.922	Gallus_gallus
ENSCAPG00000012135	SALL4	97	43.834	ENSGAFG00000019925	sall4	98	44.465	Gambusia_affinis
ENSCAPG00000012135	SALL4	95	41.705	ENSGACG00000011124	sall4	97	41.989	Gasterosteus_aculeatus
ENSCAPG00000012135	SALL4	98	53.606	ENSGAGG00000002297	SALL4	99	53.963	Gopherus_agassizii
ENSCAPG00000012135	SALL4	98	81.152	ENSGGOG00000001832	SALL4	98	81.152	Gorilla_gorilla
ENSCAPG00000012135	SALL4	96	43.455	ENSHBUG00000007327	sall4	99	42.662	Haplochromis_burtoni
ENSCAPG00000012135	SALL4	98	84.293	ENSHGLG00000009043	SALL4	97	84.000	Heterocephalus_glaber_female
ENSCAPG00000012135	SALL4	98	84.195	ENSHGLG00100002722	SALL4	97	83.902	Heterocephalus_glaber_male
ENSCAPG00000012135	SALL4	95	42.222	ENSHCOG00000008519	sall4	99	41.652	Hippocampus_comes
ENSCAPG00000012135	SALL4	95	45.060	ENSIPUG00000019170	sall4	97	45.078	Ictalurus_punctatus
ENSCAPG00000012135	SALL4	64	84.549	ENSSTOG00000025002	SALL4	98	89.706	Ictidomys_tridecemlineatus
ENSCAPG00000012135	SALL4	99	76.814	ENSJJAG00000020688	Sall4	98	91.429	Jaculus_jaculus
ENSCAPG00000012135	SALL4	95	44.546	ENSKMAG00000002501	sall4	97	44.700	Kryptolebias_marmoratus
ENSCAPG00000012135	SALL4	95	43.796	ENSLBEG00000019951	sall4	97	43.744	Labrus_bergylta
ENSCAPG00000012135	SALL4	94	45.989	ENSLACG00000013898	SALL4	100	60.638	Latimeria_chalumnae
ENSCAPG00000012135	SALL4	98	46.835	ENSLOCG00000002427	sall4	99	47.112	Lepisosteus_oculatus
ENSCAPG00000012135	SALL4	99	76.348	ENSLAFG00000004309	SALL4	99	76.443	Loxodonta_africana
ENSCAPG00000012135	SALL4	99	78.491	ENSMFAG00000027169	SALL4	99	78.585	Macaca_fascicularis
ENSCAPG00000012135	SALL4	91	81.354	ENSMMUG00000003870	SALL4	99	86.638	Macaca_mulatta
ENSCAPG00000012135	SALL4	91	81.354	ENSMNEG00000035995	SALL4	100	81.648	Macaca_nemestrina
ENSCAPG00000012135	SALL4	99	78.302	ENSMLEG00000030467	SALL4	99	78.565	Mandrillus_leucophaeus
ENSCAPG00000012135	SALL4	96	43.306	ENSMAMG00000005223	sall4	98	42.857	Mastacembelus_armatus
ENSCAPG00000012135	SALL4	96	43.327	ENSMZEG00005023418	sall4	98	42.543	Maylandia_zebra
ENSCAPG00000012135	SALL4	76	61.538	ENSMGAG00000009344	SALL4	97	61.538	Meleagris_gallopavo
ENSCAPG00000012135	SALL4	97	72.816	ENSMAUG00000015814	Sall4	99	75.610	Mesocricetus_auratus
ENSCAPG00000012135	SALL4	99	79.017	ENSMICG00000000027	SALL4	99	79.017	Microcebus_murinus
ENSCAPG00000012135	SALL4	97	74.757	ENSMOCG00000018245	Sall4	99	88.889	Microtus_ochrogaster
ENSCAPG00000012135	SALL4	96	43.458	ENSMMOG00000014929	sall4	98	43.478	Mola_mola
ENSCAPG00000012135	SALL4	97	58.890	ENSMODG00000016387	SALL4	94	58.675	Monodelphis_domestica
ENSCAPG00000012135	SALL4	95	43.796	ENSMALG00000018709	sall4	99	43.398	Monopterus_albus
ENSCAPG00000012135	SALL4	97	72.297	MGP_CAROLIEiJ_G0024723	Sall4	99	91.549	Mus_caroli
ENSCAPG00000012135	SALL4	97	72.464	ENSMUSG00000027547	Sall4	99	91.549	Mus_musculus
ENSCAPG00000012135	SALL4	97	70.774	MGP_PahariEiJ_G0026164	Sall4	99	92.958	Mus_pahari
ENSCAPG00000012135	SALL4	97	72.271	MGP_SPRETEiJ_G0025643	Sall4	99	91.549	Mus_spretus
ENSCAPG00000012135	SALL4	97	79.040	ENSMPUG00000017543	SALL4	96	76.698	Mustela_putorius_furo
ENSCAPG00000012135	SALL4	97	77.308	ENSMLUG00000007060	-	100	77.014	Myotis_lucifugus
ENSCAPG00000012135	SALL4	99	55.598	ENSMLUG00000028073	-	99	55.407	Myotis_lucifugus
ENSCAPG00000012135	SALL4	98	70.594	ENSMLUG00000008405	-	99	70.302	Myotis_lucifugus
ENSCAPG00000012135	SALL4	99	74.858	ENSNGAG00000017833	Sall4	99	74.573	Nannospalax_galili
ENSCAPG00000012135	SALL4	96	42.935	ENSNBRG00000001829	sall4	98	42.740	Neolamprologus_brichardi
ENSCAPG00000012135	SALL4	99	78.019	ENSNLEG00000007013	SALL4	99	78.113	Nomascus_leucogenys
ENSCAPG00000012135	SALL4	83	61.538	ENSMEUG00000005793	-	99	61.538	Notamacropus_eugenii
ENSCAPG00000012135	SALL4	97	77.299	ENSOPRG00000011640	SALL4	96	77.299	Ochotona_princeps
ENSCAPG00000012135	SALL4	96	43.053	ENSONIG00000016557	sall4	98	43.053	Oreochromis_niloticus
ENSCAPG00000012135	SALL4	96	58.779	ENSOANG00000008667	SALL4	94	59.287	Ornithorhynchus_anatinus
ENSCAPG00000012135	SALL4	97	78.051	ENSOCUG00000011797	SALL4	100	78.063	Oryctolagus_cuniculus
ENSCAPG00000012135	SALL4	98	43.643	ENSORLG00000016130	sall4	99	43.231	Oryzias_latipes
ENSCAPG00000012135	SALL4	98	43.381	ENSORLG00020007339	sall4	99	43.165	Oryzias_latipes_hni
ENSCAPG00000012135	SALL4	98	43.459	ENSORLG00015002265	sall4	99	43.408	Oryzias_latipes_hsok
ENSCAPG00000012135	SALL4	97	44.059	ENSOMEG00000017344	sall4	98	43.784	Oryzias_melastigma
ENSCAPG00000012135	SALL4	95	78.696	ENSOGAG00000013799	SALL4	100	78.599	Otolemur_garnettii
ENSCAPG00000012135	SALL4	99	69.202	ENSOARG00000014570	SALL4	99	68.916	Ovis_aries
ENSCAPG00000012135	SALL4	98	80.897	ENSPPAG00000038064	SALL4	98	80.897	Pan_paniscus
ENSCAPG00000012135	SALL4	97	77.843	ENSPPRG00000008677	SALL4	97	85.408	Panthera_pardus
ENSCAPG00000012135	SALL4	98	80.897	ENSPTRG00000013631	SALL4	98	80.897	Pan_troglodytes
ENSCAPG00000012135	SALL4	91	81.354	ENSPANG00000021792	SALL4	100	81.648	Papio_anubis
ENSCAPG00000012135	SALL4	95	44.578	ENSPKIG00000007074	sall4	97	44.578	Paramormyrops_kingsleyae
ENSCAPG00000012135	SALL4	97	53.825	ENSPSIG00000009066	SALL4	98	54.471	Pelodiscus_sinensis
ENSCAPG00000012135	SALL4	95	43.033	ENSPMGG00000022551	sall4	96	42.545	Periophthalmus_magnuspinnatus
ENSCAPG00000012135	SALL4	97	75.219	ENSPEMG00000022706	Sall4	99	91.549	Peromyscus_maniculatus_bairdii
ENSCAPG00000012135	SALL4	97	56.972	ENSPCIG00000022838	SALL4	94	56.961	Phascolarctos_cinereus
ENSCAPG00000012135	SALL4	97	44.749	ENSPFOG00000001442	sall4	98	44.516	Poecilia_formosa
ENSCAPG00000012135	SALL4	97	44.566	ENSPLAG00000008760	sall4	98	44.424	Poecilia_latipinna
ENSCAPG00000012135	SALL4	97	44.617	ENSPMEG00000008497	sall4	98	44.475	Poecilia_mexicana
ENSCAPG00000012135	SALL4	97	44.353	ENSPREG00000021140	sall4	98	44.120	Poecilia_reticulata
ENSCAPG00000012135	SALL4	97	81.060	ENSPPYG00000011138	SALL4	99	78.585	Pongo_abelii
ENSCAPG00000012135	SALL4	97	72.063	ENSPCAG00000004726	SALL4	96	72.173	Procavia_capensis
ENSCAPG00000012135	SALL4	99	78.619	ENSPCOG00000016321	SALL4	99	78.808	Propithecus_coquereli
ENSCAPG00000012135	SALL4	90	78.421	ENSPVAG00000002075	SALL4	94	75.907	Pteropus_vampyrus
ENSCAPG00000012135	SALL4	96	43.403	ENSPNYG00000021738	sall4	98	42.609	Pundamilia_nyererei
ENSCAPG00000012135	SALL4	95	45.032	ENSPNAG00000020929	sall4	97	44.982	Pygocentrus_nattereri
ENSCAPG00000012135	SALL4	97	73.796	ENSRNOG00000050035	Sall4	100	80.081	Rattus_norvegicus
ENSCAPG00000012135	SALL4	99	78.113	ENSRBIG00000039876	SALL4	100	81.146	Rhinopithecus_bieti
ENSCAPG00000012135	SALL4	99	78.208	ENSRROG00000036585	SALL4	99	78.302	Rhinopithecus_roxellana
ENSCAPG00000012135	SALL4	99	77.547	ENSSBOG00000030011	SALL4	99	77.358	Saimiri_boliviensis_boliviensis
ENSCAPG00000012135	SALL4	95	67.773	ENSSHAG00000018013	SALL4	86	67.773	Sarcophilus_harrisii
ENSCAPG00000012135	SALL4	96	45.032	ENSSFOG00015021075	sall4	98	44.754	Scleropages_formosus
ENSCAPG00000012135	SALL4	95	43.937	ENSSMAG00000019218	sall4	96	43.843	Scophthalmus_maximus
ENSCAPG00000012135	SALL4	95	44.033	ENSSDUG00000004657	sall4	98	43.796	Seriola_dumerili
ENSCAPG00000012135	SALL4	96	44.048	ENSSLDG00000004973	sall4	97	43.985	Seriola_lalandi_dorsalis
ENSCAPG00000012135	SALL4	97	43.141	ENSSPAG00000001978	sall4	98	42.688	Stegastes_partitus
ENSCAPG00000012135	SALL4	97	78.431	ENSSSCG00000007479	SALL4	96	78.333	Sus_scrofa
ENSCAPG00000012135	SALL4	96	44.840	ENSTRUG00000007410	sall4	98	44.322	Takifugu_rubripes
ENSCAPG00000012135	SALL4	95	43.178	ENSTNIG00000012460	sall4	97	43.284	Tetraodon_nigroviridis
ENSCAPG00000012135	SALL4	97	75.591	ENSTTRG00000007753	SALL4	100	75.394	Tursiops_truncatus
ENSCAPG00000012135	SALL4	97	80.040	ENSUAMG00000010113	SALL4	96	80.000	Ursus_americanus
ENSCAPG00000012135	SALL4	97	78.809	ENSUMAG00000024274	SALL4	99	78.809	Ursus_maritimus
ENSCAPG00000012135	SALL4	96	49.115	ENSXETG00000012326	sall4	97	49.203	Xenopus_tropicalis
ENSCAPG00000012135	SALL4	97	42.376	ENSXCOG00000015467	sall4	98	41.869	Xiphophorus_couchianus
ENSCAPG00000012135	SALL4	97	41.906	ENSXMAG00000012692	sall4	98	41.405	Xiphophorus_maculatus