EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAPG00000012228 (Gene tree)
Gene ID: -
Gene Symbol: ZBTB48
Alias: HKR3|TZAP|ZNF855
Full Name: zinc finger and BTB domain containing 48
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Minus strand
Length: 7580 bases
Position: chrAVPZ01000178.1:26098288-26105867
Accession: 4930
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000011117	zf-C2H2	PF00096.26	1.9e-36	1	6
ENSCAPP00000011117	zf-C2H2	PF00096.26	1.9e-36	2	6
ENSCAPP00000011117	zf-C2H2	PF00096.26	1.9e-36	3	6
ENSCAPP00000011117	zf-C2H2	PF00096.26	1.9e-36	4	6
ENSCAPP00000011117	zf-C2H2	PF00096.26	1.9e-36	5	6
ENSCAPP00000011117	zf-C2H2	PF00096.26	1.9e-36	6	6
ENSCAPP00000011113	zf-C2H2	PF00096.26	7e-20	1	4
ENSCAPP00000011113	zf-C2H2	PF00096.26	7e-20	2	4
ENSCAPP00000011113	zf-C2H2	PF00096.26	7e-20	3	4
ENSCAPP00000011113	zf-C2H2	PF00096.26	7e-20	4	4
ENSCAPP00000011117	zf-met	PF12874.7	1.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000014851	ZBTB48-201	1857	-	ENSCAPP00000011113	618 (aa)	-	-
ENSCAPT00000014856	ZBTB48-202	1962	-	ENSCAPP00000011117	653 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000012228's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000012228's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAPG00000012228	ZBTB48	55	32.627	ENSCAPG00000015862	GTF3A	88	32.995
ENSCAPG00000012228	ZBTB48	85	34.711	ENSCAPG00000012455	MYNN	83	45.098
ENSCAPG00000012228	ZBTB48	56	36.418	ENSCAPG00000013118	-	84	36.418
ENSCAPG00000012228	ZBTB48	53	41.593	ENSCAPG00000000045	WT1	64	41.593
ENSCAPG00000012228	ZBTB48	81	30.894	ENSCAPG00000002173	GZF1	80	33.673
ENSCAPG00000012228	ZBTB48	52	36.709	ENSCAPG00000000623	ZNF770	94	36.709
ENSCAPG00000012228	ZBTB48	57	38.596	ENSCAPG00000002667	-	78	38.333
ENSCAPG00000012228	ZBTB48	50	36.364	ENSCAPG00000014002	SNAI1	51	36.364
ENSCAPG00000012228	ZBTB48	61	38.571	ENSCAPG00000000196	ZFP64	56	38.571
ENSCAPG00000012228	ZBTB48	57	37.143	ENSCAPG00000000389	ZNF574	72	32.012
ENSCAPG00000012228	ZBTB48	50	33.613	ENSCAPG00000009522	ZNF865	73	33.613
ENSCAPG00000012228	ZBTB48	56	41.026	ENSCAPG00000003129	-	81	41.026
ENSCAPG00000012228	ZBTB48	59	38.696	ENSCAPG00000017499	ZNF2	74	39.583
ENSCAPG00000012228	ZBTB48	51	35.461	ENSCAPG00000012608	-	69	35.461
ENSCAPG00000012228	ZBTB48	69	37.427	ENSCAPG00000010404	GFI1B	88	37.427
ENSCAPG00000012228	ZBTB48	87	44.643	ENSCAPG00000003336	ZBTB14	85	44.643
ENSCAPG00000012228	ZBTB48	51	30.719	ENSCAPG00000004720	ZNF526	74	32.907
ENSCAPG00000012228	ZBTB48	53	36.237	ENSCAPG00000015217	PRDM5	85	44.218
ENSCAPG00000012228	ZBTB48	50	31.858	ENSCAPG00000007257	ZNF652	58	31.858
ENSCAPG00000012228	ZBTB48	59	40.336	ENSCAPG00000009816	ZNF236	74	40.336
ENSCAPG00000012228	ZBTB48	52	33.624	ENSCAPG00000007129	ZNF319	87	31.690

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000012228	ZBTB48	72	72.764	ENSAPOG00000002861	zbtb48	93	72.764	Acanthochromis_polyacanthus
ENSCAPG00000012228	ZBTB48	90	53.620	ENSAOCG00000008304	zbtb48	83	56.787	Amphiprion_ocellaris
ENSCAPG00000012228	ZBTB48	99	47.226	ENSATEG00000024413	zbtb48	92	46.846	Anabas_testudineus
ENSCAPG00000012228	ZBTB48	94	52.640	ENSDARG00000039263	zbtb48	85	53.528	Danio_rerio
ENSCAPG00000012228	ZBTB48	100	89.127	ENSDORG00000009677	Zbtb48	95	89.127	Dipodomys_ordii
ENSCAPG00000012228	ZBTB48	62	89.706	ENSFALG00000009796	ZBTB48	94	80.462	Ficedula_albicollis
ENSCAPG00000012228	ZBTB48	76	89.750	ENSGALG00000000637	ZBTB48	94	66.718	Gallus_gallus
ENSCAPG00000012228	ZBTB48	90	52.641	ENSGACG00000011187	zbtb48	94	51.515	Gasterosteus_aculeatus
ENSCAPG00000012228	ZBTB48	55	68.908	ENSKMAG00000002963	zbtb48	84	54.380	Kryptolebias_marmoratus
ENSCAPG00000012228	ZBTB48	76	58.603	ENSLBEG00000012151	zbtb48	91	52.621	Labrus_bergylta
ENSCAPG00000012228	ZBTB48	62	88.916	ENSMGAG00000001275	ZBTB48	99	88.916	Meleagris_gallopavo
ENSCAPG00000012228	ZBTB48	90	51.877	ENSMMOG00000014996	zbtb48	89	51.536	Mola_mola
ENSCAPG00000012228	ZBTB48	92	50.000	ENSORLG00000019331	zbtb48	91	50.247	Oryzias_latipes
ENSCAPG00000012228	ZBTB48	90	50.596	ENSORLG00020007790	zbtb48	88	50.256	Oryzias_latipes_hni
ENSCAPG00000012228	ZBTB48	92	64.943	ENSORLG00015002568	zbtb48	90	47.020	Oryzias_latipes_hsok
ENSCAPG00000012228	ZBTB48	96	48.666	ENSOMEG00000017762	zbtb48	94	48.666	Oryzias_melastigma
ENSCAPG00000012228	ZBTB48	51	68.485	ENSPMGG00000019913	zbtb48	77	47.236	Periophthalmus_magnuspinnatus
ENSCAPG00000012228	ZBTB48	70	93.013	ENSPVAG00000013020	ZBTB48	100	93.013	Pteropus_vampyrus
ENSCAPG00000012228	ZBTB48	90	51.520	ENSSDUG00000004449	zbtb48	79	52.026	Seriola_dumerili
ENSCAPG00000012228	ZBTB48	94	50.000	ENSSLDG00000017718	zbtb48	75	71.629	Seriola_lalandi_dorsalis
ENSCAPG00000012228	ZBTB48	77	82.339	ENSSPUG00000011853	ZBTB48	87	82.339	Sphenodon_punctatus
ENSCAPG00000012228	ZBTB48	62	89.216	ENSTGUG00000002589	ZBTB48	88	83.705	Taeniopygia_guttata
ENSCAPG00000012228	ZBTB48	90	50.081	ENSTRUG00000008615	zbtb48	84	50.162	Takifugu_rubripes
ENSCAPG00000012228	ZBTB48	90	52.217	ENSTNIG00000012449	zbtb48	94	52.217	Tetraodon_nigroviridis
ENSCAPG00000012228	ZBTB48	99	86.068	ENSTBEG00000014014	ZBTB48	97	86.068	Tupaia_belangeri