EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000012282 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 75289 bases
Position: chrAVPZ01000091.1:406207-481495
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000011166	MRP-S27	PF10037.9	1.8e-54	1	3
ENSCAPP00000011166	MRP-S27	PF10037.9	1.8e-54	2	3
ENSCAPP00000011166	MRP-S27	PF10037.9	1.8e-54	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000014905	-	834	-	ENSCAPP00000011166	277 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000012282's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000012282's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000012282	-	94	90.323	ENSG00000113048	MRPS27	90	90.323	Homo_sapiens
ENSCAPG00000012282	-	100	73.684	ENSAPOG00000013985	mrps27	81	73.684	Acanthochromis_polyacanthus
ENSCAPG00000012282	-	95	53.898	ENSAMEG00000007215	MRPS27	87	51.399	Ailuropoda_melanoleuca
ENSCAPG00000012282	-	96	71.930	ENSACIG00000004470	mrps27	76	71.930	Amphilophus_citrinellus
ENSCAPG00000012282	-	100	70.175	ENSAOCG00000011222	mrps27	78	70.175	Amphiprion_ocellaris
ENSCAPG00000012282	-	100	70.175	ENSAPEG00000006821	mrps27	82	70.175	Amphiprion_percula
ENSCAPG00000012282	-	96	66.667	ENSATEG00000018107	mrps27	69	66.667	Anabas_testudineus
ENSCAPG00000012282	-	100	75.439	ENSAPLG00000010577	MRPS27	72	75.439	Anas_platyrhynchos
ENSCAPG00000012282	-	100	70.175	ENSACAG00000009787	MRPS27	72	70.175	Anolis_carolinensis
ENSCAPG00000012282	-	99	85.965	ENSANAG00000019419	MRPS27	81	85.965	Aotus_nancymaae
ENSCAPG00000012282	-	100	70.175	ENSACLG00000013665	mrps27	70	70.175	Astatotilapia_calliptera
ENSCAPG00000012282	-	96	64.912	ENSAMXG00000006286	mrps27	71	64.912	Astyanax_mexicanus
ENSCAPG00000012282	-	97	85.965	ENSBTAG00000001962	MRPS27	73	85.965	Bos_taurus
ENSCAPG00000012282	-	100	87.719	ENSCJAG00000016356	MRPS27	83	87.719	Callithrix_jacchus
ENSCAPG00000012282	-	97	89.474	ENSCAFG00000007967	MRPS27	80	89.474	Canis_familiaris
ENSCAPG00000012282	-	97	91.228	ENSCAFG00020019151	MRPS27	70	91.228	Canis_lupus_dingo
ENSCAPG00000012282	-	97	89.474	ENSCHIG00000024940	MRPS27	82	89.474	Capra_hircus
ENSCAPG00000012282	-	100	89.474	ENSTSYG00000000559	MRPS27	82	89.474	Carlito_syrichta
ENSCAPG00000012282	-	97	92.982	ENSCPOG00000040481	MRPS27	82	92.982	Cavia_porcellus
ENSCAPG00000012282	-	100	87.719	ENSCCAG00000030550	MRPS27	83	87.719	Cebus_capucinus
ENSCAPG00000012282	-	97	93.548	ENSCATG00000034419	MRPS27	89	93.548	Cercocebus_atys
ENSCAPG00000012282	-	100	87.719	ENSCLAG00000000933	MRPS27	83	87.719	Chinchilla_lanigera
ENSCAPG00000012282	-	100	87.719	ENSCSAG00000015626	MRPS27	83	87.719	Chlorocebus_sabaeus
ENSCAPG00000012282	-	94	100.000	ENSCHOG00000002565	MRPS27	89	100.000	Choloepus_hoffmanni
ENSCAPG00000012282	-	100	75.439	ENSCPBG00000000195	MRPS27	71	75.439	Chrysemys_picta_bellii
ENSCAPG00000012282	-	100	87.719	ENSCANG00000034545	MRPS27	83	87.719	Colobus_angolensis_palliatus
ENSCAPG00000012282	-	100	82.143	ENSCGRG00001016241	Mrps27	82	82.143	Cricetulus_griseus_chok1gshd
ENSCAPG00000012282	-	100	82.143	ENSCGRG00000005290	Mrps27	82	82.143	Cricetulus_griseus_crigri
ENSCAPG00000012282	-	96	61.404	ENSCSEG00000017845	mrps27	71	61.404	Cynoglossus_semilaevis
ENSCAPG00000012282	-	100	66.667	ENSCVAG00000020594	mrps27	82	66.667	Cyprinodon_variegatus
ENSCAPG00000012282	-	99	61.404	ENSDARG00000059234	mrps27	71	61.404	Danio_rerio
ENSCAPG00000012282	-	93	96.774	ENSDNOG00000008698	MRPS27	87	96.774	Dasypus_novemcinctus
ENSCAPG00000012282	-	100	87.719	ENSDORG00000028069	Mrps27	82	87.719	Dipodomys_ordii
ENSCAPG00000012282	-	95	85.965	ENSETEG00000016540	MRPS27	76	85.965	Echinops_telfairi
ENSCAPG00000012282	-	96	48.214	ENSEBUG00000008346	mrps27	69	48.214	Eptatretus_burgeri
ENSCAPG00000012282	-	99	87.719	ENSEASG00005018033	MRPS27	74	87.719	Equus_asinus_asinus
ENSCAPG00000012282	-	99	87.719	ENSECAG00000008099	MRPS27	74	87.719	Equus_caballus
ENSCAPG00000012282	-	88	85.965	ENSEEUG00000014006	MRPS27	56	85.965	Erinaceus_europaeus
ENSCAPG00000012282	-	100	73.684	ENSELUG00000002400	mrps27	71	73.684	Esox_lucius
ENSCAPG00000012282	-	100	91.228	ENSFCAG00000005452	MRPS27	82	91.228	Felis_catus
ENSCAPG00000012282	-	100	75.439	ENSFALG00000010306	MRPS27	75	75.439	Ficedula_albicollis
ENSCAPG00000012282	-	97	91.228	ENSFDAG00000011101	MRPS27	81	91.228	Fukomys_damarensis
ENSCAPG00000012282	-	96	61.404	ENSGMOG00000007531	mrps27	71	61.404	Gadus_morhua
ENSCAPG00000012282	-	100	78.947	ENSGALG00000015002	MRPS27	72	78.947	Gallus_gallus
ENSCAPG00000012282	-	66	68.421	ENSGAFG00000010539	mrps27	62	68.421	Gambusia_affinis
ENSCAPG00000012282	-	96	66.667	ENSGACG00000006548	mrps27	71	66.667	Gasterosteus_aculeatus
ENSCAPG00000012282	-	82	49.393	ENSGAGG00000015958	MRPS27	65	46.610	Gopherus_agassizii
ENSCAPG00000012282	-	96	84.211	ENSGGOG00000010683	MRPS27	83	84.211	Gorilla_gorilla
ENSCAPG00000012282	-	100	70.175	ENSHBUG00000003318	mrps27	70	70.175	Haplochromis_burtoni
ENSCAPG00000012282	-	92	93.548	ENSHGLG00000001577	MRPS27	89	93.548	Heterocephalus_glaber_female
ENSCAPG00000012282	-	100	87.719	ENSHGLG00100006845	MRPS27	89	93.548	Heterocephalus_glaber_male
ENSCAPG00000012282	-	80	39.130	ENSHCOG00000000714	mrps27	94	39.496	Hippocampus_comes
ENSCAPG00000012282	-	99	70.175	ENSIPUG00000025051	mrps27	83	70.175	Ictalurus_punctatus
ENSCAPG00000012282	-	100	87.719	ENSSTOG00000006565	MRPS27	81	87.719	Ictidomys_tridecemlineatus
ENSCAPG00000012282	-	96	73.684	ENSKMAG00000000487	mrps27	82	73.684	Kryptolebias_marmoratus
ENSCAPG00000012282	-	96	64.912	ENSLBEG00000018377	mrps27	67	64.912	Labrus_bergylta
ENSCAPG00000012282	-	100	70.175	ENSLACG00000014327	MRPS27	75	70.175	Latimeria_chalumnae
ENSCAPG00000012282	-	100	73.684	ENSLOCG00000011134	mrps27	83	73.684	Lepisosteus_oculatus
ENSCAPG00000012282	-	93	55.670	ENSLAFG00000004110	MRPS27	87	51.903	Loxodonta_africana
ENSCAPG00000012282	-	100	87.719	ENSMFAG00000030039	MRPS27	83	87.719	Macaca_fascicularis
ENSCAPG00000012282	-	100	87.719	ENSMMUG00000017905	MRPS27	81	87.719	Macaca_mulatta
ENSCAPG00000012282	-	100	87.719	ENSMNEG00000038426	MRPS27	83	87.719	Macaca_nemestrina
ENSCAPG00000012282	-	100	87.719	ENSMLEG00000028172	MRPS27	83	87.719	Mandrillus_leucophaeus
ENSCAPG00000012282	-	97	68.421	ENSMAMG00000019547	mrps27	77	68.421	Mastacembelus_armatus
ENSCAPG00000012282	-	100	70.175	ENSMZEG00005008090	mrps27	70	70.175	Maylandia_zebra
ENSCAPG00000012282	-	82	51.417	ENSMGAG00000004213	MRPS27	94	49.160	Meleagris_gallopavo
ENSCAPG00000012282	-	100	56.563	ENSMAUG00000005620	Mrps27	89	54.808	Mesocricetus_auratus
ENSCAPG00000012282	-	100	85.965	ENSMICG00000004527	MRPS27	82	85.965	Microcebus_murinus
ENSCAPG00000012282	-	100	83.929	ENSMOCG00000014839	Mrps27	82	83.929	Microtus_ochrogaster
ENSCAPG00000012282	-	100	63.158	ENSMMOG00000013203	mrps27	71	63.158	Mola_mola
ENSCAPG00000012282	-	100	85.965	ENSMODG00000001687	MRPS27	82	85.965	Monodelphis_domestica
ENSCAPG00000012282	-	100	63.158	ENSMALG00000017925	mrps27	57	63.158	Monopterus_albus
ENSCAPG00000012282	-	100	80.357	MGP_CAROLIEiJ_G0018830	Mrps27	82	80.357	Mus_caroli
ENSCAPG00000012282	-	99	82.143	ENSMUSG00000041632	Mrps27	72	82.143	Mus_musculus
ENSCAPG00000012282	-	99	80.357	MGP_PahariEiJ_G0015905	Mrps27	83	80.357	Mus_pahari
ENSCAPG00000012282	-	100	80.357	MGP_SPRETEiJ_G0019712	Mrps27	82	80.357	Mus_spretus
ENSCAPG00000012282	-	100	89.474	ENSMPUG00000014403	MRPS27	82	89.474	Mustela_putorius_furo
ENSCAPG00000012282	-	91	52.448	ENSMLUG00000007355	MRPS27	87	50.000	Myotis_lucifugus
ENSCAPG00000012282	-	97	87.719	ENSNGAG00000002484	Mrps27	82	87.719	Nannospalax_galili
ENSCAPG00000012282	-	88	83.636	ENSMEUG00000013990	MRPS27	56	83.636	Notamacropus_eugenii
ENSCAPG00000012282	-	99	50.168	ENSOPRG00000007274	MRPS27	83	47.405	Ochotona_princeps
ENSCAPG00000012282	-	94	90.323	ENSODEG00000016210	MRPS27	89	90.323	Octodon_degus
ENSCAPG00000012282	-	100	68.421	ENSONIG00000015240	mrps27	81	68.421	Oreochromis_niloticus
ENSCAPG00000012282	-	94	40.483	ENSOANG00000004072	MRPS27	95	38.166	Ornithorhynchus_anatinus
ENSCAPG00000012282	-	100	84.211	ENSOCUG00000007961	MRPS27	82	84.211	Oryctolagus_cuniculus
ENSCAPG00000012282	-	96	66.667	ENSORLG00020002869	mrps27	71	66.667	Oryzias_latipes_hni
ENSCAPG00000012282	-	96	66.667	ENSORLG00015011723	mrps27	70	66.667	Oryzias_latipes_hsok
ENSCAPG00000012282	-	96	66.667	ENSOMEG00000020582	mrps27	70	66.667	Oryzias_melastigma
ENSCAPG00000012282	-	93	55.172	ENSOGAG00000008385	MRPS27	78	54.610	Otolemur_garnettii
ENSCAPG00000012282	-	99	89.474	ENSOARG00000005129	MRPS27	82	89.474	Ovis_aries
ENSCAPG00000012282	-	96	84.211	ENSPPAG00000038112	MRPS27	72	84.211	Pan_paniscus
ENSCAPG00000012282	-	100	91.228	ENSPPRG00000014416	MRPS27	82	91.228	Panthera_pardus
ENSCAPG00000012282	-	100	91.228	ENSPTIG00000020435	MRPS27	82	91.228	Panthera_tigris_altaica
ENSCAPG00000012282	-	94	90.323	ENSPTRG00000016967	MRPS27	89	90.323	Pan_troglodytes
ENSCAPG00000012282	-	100	87.719	ENSPANG00000015368	MRPS27	83	87.719	Papio_anubis
ENSCAPG00000012282	-	99	59.322	ENSPKIG00000018916	mrps27	67	59.322	Paramormyrops_kingsleyae
ENSCAPG00000012282	-	99	73.684	ENSPSIG00000014565	MRPS27	73	73.684	Pelodiscus_sinensis
ENSCAPG00000012282	-	92	74.194	ENSPMGG00000017275	mrps27	75	76.667	Periophthalmus_magnuspinnatus
ENSCAPG00000012282	-	100	83.929	ENSPEMG00000023724	Mrps27	82	83.929	Peromyscus_maniculatus_bairdii
ENSCAPG00000012282	-	58	58.621	ENSPMAG00000009772	mrps27	62	58.621	Petromyzon_marinus
ENSCAPG00000012282	-	100	78.947	ENSPCIG00000029050	MRPS27	85	78.947	Phascolarctos_cinereus
ENSCAPG00000012282	-	93	80.000	ENSPFOG00000007317	mrps27	88	80.000	Poecilia_formosa
ENSCAPG00000012282	-	96	64.912	ENSPLAG00000016221	mrps27	76	64.912	Poecilia_latipinna
ENSCAPG00000012282	-	96	64.912	ENSPMEG00000016504	mrps27	81	64.912	Poecilia_mexicana
ENSCAPG00000012282	-	96	85.965	ENSPPYG00000015542	MRPS27	83	85.965	Pongo_abelii
ENSCAPG00000012282	-	100	89.474	ENSPCAG00000006737	MRPS27	71	89.474	Procavia_capensis
ENSCAPG00000012282	-	100	85.965	ENSPCOG00000028430	MRPS27	83	85.965	Propithecus_coquereli
ENSCAPG00000012282	-	88	89.474	ENSPVAG00000010933	MRPS27	56	89.474	Pteropus_vampyrus
ENSCAPG00000012282	-	100	70.175	ENSPNYG00000016318	mrps27	76	70.175	Pundamilia_nyererei
ENSCAPG00000012282	-	96	66.667	ENSPNAG00000008002	mrps27	71	66.667	Pygocentrus_nattereri
ENSCAPG00000012282	-	100	83.929	ENSRNOG00000017272	Mrps27	81	83.929	Rattus_norvegicus
ENSCAPG00000012282	-	100	87.719	ENSRBIG00000013185	MRPS27	83	87.719	Rhinopithecus_bieti
ENSCAPG00000012282	-	100	87.719	ENSRROG00000040560	MRPS27	83	87.719	Rhinopithecus_roxellana
ENSCAPG00000012282	-	100	87.719	ENSSBOG00000030386	MRPS27	83	87.719	Saimiri_boliviensis_boliviensis
ENSCAPG00000012282	-	65	42.927	ENSSHAG00000011388	-	80	40.260	Sarcophilus_harrisii
ENSCAPG00000012282	-	96	66.667	ENSSFOG00015023271	mrps27	73	66.667	Scleropages_formosus
ENSCAPG00000012282	-	100	66.667	ENSSMAG00000003423	mrps27	76	66.667	Scophthalmus_maximus
ENSCAPG00000012282	-	96	71.930	ENSSDUG00000001883	mrps27	82	71.930	Seriola_dumerili
ENSCAPG00000012282	-	100	84.211	ENSSARG00000004944	MRPS27	71	84.211	Sorex_araneus
ENSCAPG00000012282	-	93	74.286	ENSSPUG00000000182	MRPS27	87	74.286	Sphenodon_punctatus
ENSCAPG00000012282	-	96	63.158	ENSSPAG00000009682	mrps27	80	63.158	Stegastes_partitus
ENSCAPG00000012282	-	80	49.180	ENSSSCG00000011161	-	62	46.957	Sus_scrofa
ENSCAPG00000012282	-	100	85.965	ENSSSCG00000023818	-	75	85.965	Sus_scrofa
ENSCAPG00000012282	-	100	73.684	ENSTGUG00000005691	MRPS27	76	73.684	Taeniopygia_guttata
ENSCAPG00000012282	-	100	68.421	ENSTRUG00000015643	mrps27	71	68.421	Takifugu_rubripes
ENSCAPG00000012282	-	100	70.175	ENSTNIG00000016683	mrps27	82	70.175	Tetraodon_nigroviridis
ENSCAPG00000012282	-	78	75.000	ENSTBEG00000016472	MRPS27	51	87.097	Tupaia_belangeri
ENSCAPG00000012282	-	95	91.228	ENSTTRG00000011837	MRPS27	82	91.228	Tursiops_truncatus
ENSCAPG00000012282	-	93	100.000	ENSUAMG00000007585	MRPS27	87	100.000	Ursus_americanus
ENSCAPG00000012282	-	100	91.228	ENSUMAG00000007672	MRPS27	82	91.228	Ursus_maritimus
ENSCAPG00000012282	-	99	91.228	ENSVPAG00000009593	MRPS27	72	91.228	Vicugna_pacos
ENSCAPG00000012282	-	92	91.228	ENSVVUG00000007276	MRPS27	76	91.228	Vulpes_vulpes
ENSCAPG00000012282	-	99	64.912	ENSXETG00000034180	MRPS27	79	64.912	Xenopus_tropicalis
ENSCAPG00000012282	-	96	66.667	ENSXMAG00000016098	mrps27	81	66.667	Xiphophorus_maculatus