EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000012399 (Gene tree)
Gene ID: -
Gene Symbol: RBBP6
Alias: P2P-R|PACT|SNAMA
Full Name: RB binding protein 6%2C ubiquitin ligase
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 25561 bases
Position: chrAVPZ01000445.1:40941349-40966909
Accession: 9889
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000011324	zf-CCHC_2	PF13696.6	2.1e-09	1	1
ENSCAPP00000011322	zf-CCHC_2	PF13696.6	2.2e-09	1	1
ENSCAPP00000011316	zf-CCHC_2	PF13696.6	2.2e-09	1	1
ENSCAPP00000011324	zf-CCHC	PF00098.23	4.6e-05	1	1
ENSCAPP00000011322	zf-CCHC	PF00098.23	4.7e-05	1	1
ENSCAPP00000011316	zf-CCHC	PF00098.23	4.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000015067	RBBP6-203	4731	-	ENSCAPP00000011324	1576 (aa)	-	-
ENSCAPT00000015065	RBBP6-202	4833	-	ENSCAPP00000011322	1610 (aa)	-	-
ENSCAPT00000015059	RBBP6-201	4863	-	ENSCAPP00000011316	1620 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000012399's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000012399's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000012399	RBBP6	96	90.120	ENSG00000122257	RBBP6	97	82.090	Homo_sapiens
ENSCAPG00000012399	RBBP6	99	89.675	ENSAMEG00000009312	RBBP6	91	89.675	Ailuropoda_melanoleuca
ENSCAPG00000012399	RBBP6	91	71.627	ENSAPLG00000009569	RBBP6	89	71.729	Anas_platyrhynchos
ENSCAPG00000012399	RBBP6	55	71.352	ENSACAG00000011794	RBBP6	83	71.352	Anolis_carolinensis
ENSCAPG00000012399	RBBP6	96	90.034	ENSANAG00000037384	RBBP6	87	90.043	Aotus_nancymaae
ENSCAPG00000012399	RBBP6	97	88.974	ENSBTAG00000009441	RBBP6	91	88.974	Bos_taurus
ENSCAPG00000012399	RBBP6	96	89.777	ENSCJAG00000020661	RBBP6	91	85.451	Callithrix_jacchus
ENSCAPG00000012399	RBBP6	99	90.258	ENSCAFG00000017566	RBBP6	93	90.258	Canis_familiaris
ENSCAPG00000012399	RBBP6	97	88.291	ENSCHIG00000013732	RBBP6	91	88.291	Capra_hircus
ENSCAPG00000012399	RBBP6	92	89.671	ENSTSYG00000000822	RBBP6	91	90.215	Carlito_syrichta
ENSCAPG00000012399	RBBP6	100	91.556	ENSCPOG00000040025	RBBP6	97	91.556	Cavia_porcellus
ENSCAPG00000012399	RBBP6	96	89.605	ENSCCAG00000023229	RBBP6	87	89.614	Cebus_capucinus
ENSCAPG00000012399	RBBP6	96	90.378	ENSCATG00000033601	RBBP6	91	86.680	Cercocebus_atys
ENSCAPG00000012399	RBBP6	99	92.237	ENSCLAG00000009872	RBBP6	93	92.237	Chinchilla_lanigera
ENSCAPG00000012399	RBBP6	96	90.206	ENSCSAG00000006609	RBBP6	86	90.215	Chlorocebus_sabaeus
ENSCAPG00000012399	RBBP6	60	88.785	ENSCHOG00000000278	RBBP6	53	88.785	Choloepus_hoffmanni
ENSCAPG00000012399	RBBP6	94	68.069	ENSCPBG00000001818	RBBP6	90	68.082	Chrysemys_picta_bellii
ENSCAPG00000012399	RBBP6	96	89.863	ENSCANG00000039613	RBBP6	87	89.871	Colobus_angolensis_palliatus
ENSCAPG00000012399	RBBP6	93	84.777	ENSCGRG00001017193	Rbbp6	87	84.982	Cricetulus_griseus_chok1gshd
ENSCAPG00000012399	RBBP6	93	84.777	ENSCGRG00000011887	Rbbp6	87	84.982	Cricetulus_griseus_crigri
ENSCAPG00000012399	RBBP6	96	89.365	ENSDNOG00000048802	RBBP6	87	89.365	Dasypus_novemcinctus
ENSCAPG00000012399	RBBP6	94	84.991	ENSDORG00000010285	Rbbp6	83	85.829	Dipodomys_ordii
ENSCAPG00000012399	RBBP6	92	86.719	ENSEEUG00000001683	RBBP6	89	86.719	Erinaceus_europaeus
ENSCAPG00000012399	RBBP6	92	89.498	ENSFCAG00000043694	RBBP6	94	86.590	Felis_catus
ENSCAPG00000012399	RBBP6	66	68.931	ENSFALG00000003750	RBBP6	84	69.973	Ficedula_albicollis
ENSCAPG00000012399	RBBP6	99	93.672	ENSFDAG00000013132	RBBP6	93	93.838	Fukomys_damarensis
ENSCAPG00000012399	RBBP6	97	73.161	ENSGALG00000006043	RBBP6	83	73.116	Gallus_gallus
ENSCAPG00000012399	RBBP6	94	67.884	ENSGAGG00000004371	RBBP6	93	68.018	Gopherus_agassizii
ENSCAPG00000012399	RBBP6	96	89.948	ENSGGOG00000007137	RBBP6	91	86.475	Gorilla_gorilla
ENSCAPG00000012399	RBBP6	99	84.944	ENSHGLG00000008327	RBBP6	68	94.662	Heterocephalus_glaber_female
ENSCAPG00000012399	RBBP6	98	87.051	ENSHGLG00100007773	RBBP6	88	89.037	Heterocephalus_glaber_male
ENSCAPG00000012399	RBBP6	97	90.472	ENSSTOG00000016006	RBBP6	87	89.927	Ictidomys_tridecemlineatus
ENSCAPG00000012399	RBBP6	92	83.227	ENSJJAG00000014549	Rbbp6	87	84.566	Jaculus_jaculus
ENSCAPG00000012399	RBBP6	92	74.367	ENSLACG00000012333	RBBP6	80	67.308	Latimeria_chalumnae
ENSCAPG00000012399	RBBP6	73	68.536	ENSLOCG00000005487	RBBP6	80	67.913	Lepisosteus_oculatus
ENSCAPG00000012399	RBBP6	96	88.326	ENSLAFG00000009528	RBBP6	86	88.336	Loxodonta_africana
ENSCAPG00000012399	RBBP6	96	90.284	ENSMFAG00000038627	RBBP6	91	86.885	Macaca_fascicularis
ENSCAPG00000012399	RBBP6	96	90.370	ENSMMUG00000015908	RBBP6	91	86.885	Macaca_mulatta
ENSCAPG00000012399	RBBP6	97	90.292	ENSMNEG00000033630	RBBP6	91	90.300	Macaca_nemestrina
ENSCAPG00000012399	RBBP6	96	90.378	ENSMLEG00000030073	RBBP6	91	86.680	Mandrillus_leucophaeus
ENSCAPG00000012399	RBBP6	94	71.251	ENSMGAG00000006423	RBBP6	88	70.997	Meleagris_gallopavo
ENSCAPG00000012399	RBBP6	92	89.661	ENSMICG00000008059	RBBP6	87	89.652	Microcebus_murinus
ENSCAPG00000012399	RBBP6	92	78.928	ENSMODG00000016318	-	88	78.981	Monodelphis_domestica
ENSCAPG00000012399	RBBP6	76	79.571	MGP_CAROLIEiJ_G0030424	-	91	85.965	Mus_caroli
ENSCAPG00000012399	RBBP6	97	83.935	ENSMUSG00000030779	Rbbp6	91	83.948	Mus_musculus
ENSCAPG00000012399	RBBP6	97	83.378	MGP_PahariEiJ_G0013634	Rbbp6	91	83.392	Mus_pahari
ENSCAPG00000012399	RBBP6	93	83.029	MGP_SPRETEiJ_G0031538	Rbbp6	88	83.226	Mus_spretus
ENSCAPG00000012399	RBBP6	98	88.861	ENSMPUG00000012318	RBBP6	90	89.283	Mustela_putorius_furo
ENSCAPG00000012399	RBBP6	93	87.887	ENSMLUG00000010601	-	86	87.934	Myotis_lucifugus
ENSCAPG00000012399	RBBP6	92	85.148	ENSNGAG00000002381	Rbbp6	87	86.347	Nannospalax_galili
ENSCAPG00000012399	RBBP6	89	95.152	ENSNLEG00000011896	RBBP6	85	95.152	Nomascus_leucogenys
ENSCAPG00000012399	RBBP6	87	71.825	ENSMEUG00000014491	RBBP6	85	71.909	Notamacropus_eugenii
ENSCAPG00000012399	RBBP6	56	98.913	ENSOPRG00000016272	RBBP6	51	98.837	Ochotona_princeps
ENSCAPG00000012399	RBBP6	92	85.899	ENSODEG00000012319	RBBP6	87	85.440	Octodon_degus
ENSCAPG00000012399	RBBP6	91	76.379	ENSOANG00000007673	RBBP6	90	70.876	Ornithorhynchus_anatinus
ENSCAPG00000012399	RBBP6	95	85.618	ENSOCUG00000004346	RBBP6	93	82.109	Oryctolagus_cuniculus
ENSCAPG00000012399	RBBP6	96	90.987	ENSOGAG00000026986	RBBP6	86	90.995	Otolemur_garnettii
ENSCAPG00000012399	RBBP6	96	88.205	ENSOARG00000017741	RBBP6	90	88.205	Ovis_aries
ENSCAPG00000012399	RBBP6	96	90.034	ENSPPAG00000023595	RBBP6	87	90.043	Pan_paniscus
ENSCAPG00000012399	RBBP6	92	89.406	ENSPPRG00000004074	RBBP6	94	86.590	Panthera_pardus
ENSCAPG00000012399	RBBP6	92	89.498	ENSPTIG00000010342	RBBP6	94	86.590	Panthera_tigris_altaica
ENSCAPG00000012399	RBBP6	96	89.948	ENSPTRG00000007897	RBBP6	91	86.475	Pan_troglodytes
ENSCAPG00000012399	RBBP6	96	90.464	ENSPANG00000019625	RBBP6	91	86.885	Papio_anubis
ENSCAPG00000012399	RBBP6	94	65.727	ENSPSIG00000004108	RBBP6	92	65.985	Pelodiscus_sinensis
ENSCAPG00000012399	RBBP6	92	79.182	ENSPCIG00000014000	RBBP6	88	79.163	Phascolarctos_cinereus
ENSCAPG00000012399	RBBP6	92	90.402	ENSPCOG00000021939	RBBP6	82	90.476	Propithecus_coquereli
ENSCAPG00000012399	RBBP6	80	84.755	ENSPVAG00000001110	RBBP6	70	85.530	Pteropus_vampyrus
ENSCAPG00000012399	RBBP6	93	82.605	ENSRNOG00000012806	Rbbp6	87	83.440	Rattus_norvegicus
ENSCAPG00000012399	RBBP6	96	79.080	ENSRBIG00000004517	RBBP6	91	86.186	Rhinopithecus_bieti
ENSCAPG00000012399	RBBP6	96	90.206	ENSRROG00000032092	RBBP6	91	86.475	Rhinopithecus_roxellana
ENSCAPG00000012399	RBBP6	96	90.378	ENSSBOG00000021666	RBBP6	91	86.066	Saimiri_boliviensis_boliviensis
ENSCAPG00000012399	RBBP6	92	79.254	ENSSHAG00000004727	-	86	79.235	Sarcophilus_harrisii
ENSCAPG00000012399	RBBP6	88	100.000	ENSSARG00000004977	RBBP6	90	82.712	Sorex_araneus
ENSCAPG00000012399	RBBP6	97	88.089	ENSSSCG00000007830	RBBP6	91	88.089	Sus_scrofa
ENSCAPG00000012399	RBBP6	94	71.282	ENSTGUG00000006185	RBBP6	86	70.357	Taeniopygia_guttata
ENSCAPG00000012399	RBBP6	97	87.254	ENSTTRG00000002696	RBBP6	87	87.409	Tursiops_truncatus
ENSCAPG00000012399	RBBP6	99	89.009	ENSUMAG00000008537	RBBP6	93	89.009	Ursus_maritimus
ENSCAPG00000012399	RBBP6	66	95.330	ENSVPAG00000006458	RBBP6	75	95.330	Vicugna_pacos
ENSCAPG00000012399	RBBP6	99	90.092	ENSVVUG00000005484	RBBP6	93	90.092	Vulpes_vulpes