EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000012400 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Minus strand
Length: 5114 bases
Position: chrAVPZ01000367.1:12552887-12558000
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000011294	Ribosomal_L23	PF00276.20	3.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000015036	-	357	-	ENSCAPP00000011294	118 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000012400's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000012400's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000012400	-	100	65.986	ENSG00000214026	MRPL23	96	65.986	Homo_sapiens
ENSCAPG00000012400	-	100	53.741	ENSAPOG00000013198	mrpl23	95	53.741	Acanthochromis_polyacanthus
ENSCAPG00000012400	-	100	67.568	ENSAMEG00000002153	-	96	67.568	Ailuropoda_melanoleuca
ENSCAPG00000012400	-	100	56.463	ENSACIG00000024327	mrpl23	96	56.463	Amphilophus_citrinellus
ENSCAPG00000012400	-	100	53.741	ENSAOCG00000013679	mrpl23	95	53.741	Amphiprion_ocellaris
ENSCAPG00000012400	-	100	53.741	ENSAPEG00000010298	mrpl23	96	52.817	Amphiprion_percula
ENSCAPG00000012400	-	100	53.061	ENSATEG00000019314	mrpl23	96	52.381	Anabas_testudineus
ENSCAPG00000012400	-	65	44.340	ENSAPLG00000012955	-	92	44.340	Anas_platyrhynchos
ENSCAPG00000012400	-	61	69.444	ENSACAG00000009700	-	76	69.444	Anolis_carolinensis
ENSCAPG00000012400	-	100	68.707	ENSANAG00000010507	-	97	68.707	Aotus_nancymaae
ENSCAPG00000012400	-	100	55.782	ENSACLG00000002565	mrpl23	95	55.782	Astatotilapia_calliptera
ENSCAPG00000012400	-	61	65.278	ENSAMXG00000016759	mrpl23	64	68.116	Astyanax_mexicanus
ENSCAPG00000012400	-	65	54.717	ENSBTAG00000000103	MRPL23	100	54.717	Bos_taurus
ENSCAPG00000012400	-	100	68.707	ENSCAFG00000010086	-	96	68.707	Canis_familiaris
ENSCAPG00000012400	-	100	68.707	ENSCAFG00020017439	-	96	68.707	Canis_lupus_dingo
ENSCAPG00000012400	-	100	65.986	ENSCHIG00000019224	-	96	65.986	Capra_hircus
ENSCAPG00000012400	-	100	64.384	ENSTSYG00000030664	-	97	64.384	Carlito_syrichta
ENSCAPG00000012400	-	100	82.517	ENSCPOG00000035162	-	96	82.517	Cavia_porcellus
ENSCAPG00000012400	-	100	68.276	ENSCCAG00000021662	-	96	68.276	Cebus_capucinus
ENSCAPG00000012400	-	100	65.986	ENSCATG00000037780	-	95	65.986	Cercocebus_atys
ENSCAPG00000012400	-	97	62.590	ENSCATG00000019817	-	88	62.590	Cercocebus_atys
ENSCAPG00000012400	-	100	77.622	ENSCLAG00000015446	-	96	77.622	Chinchilla_lanigera
ENSCAPG00000012400	-	100	65.986	ENSCSAG00000009837	-	96	65.986	Chlorocebus_sabaeus
ENSCAPG00000012400	-	100	64.865	ENSCSAG00000019043	-	96	64.865	Chlorocebus_sabaeus
ENSCAPG00000012400	-	100	57.143	ENSCPBG00000007389	-	95	57.143	Chrysemys_picta_bellii
ENSCAPG00000012400	-	100	65.306	ENSCANG00000032318	-	100	65.306	Colobus_angolensis_palliatus
ENSCAPG00000012400	-	100	66.434	ENSCGRG00001000462	Mrpl23	96	66.434	Cricetulus_griseus_chok1gshd
ENSCAPG00000012400	-	100	66.434	ENSCGRG00000002207	Mrpl23	96	66.434	Cricetulus_griseus_crigri
ENSCAPG00000012400	-	100	51.020	ENSCSEG00000008738	mrpl23	99	51.020	Cynoglossus_semilaevis
ENSCAPG00000012400	-	100	53.061	ENSCVAG00000002822	mrpl23	95	53.061	Cyprinodon_variegatus
ENSCAPG00000012400	-	100	51.020	ENSDARG00000045696	mrpl23	96	51.020	Danio_rerio
ENSCAPG00000012400	-	100	56.463	ENSDNOG00000047306	-	96	56.463	Dasypus_novemcinctus
ENSCAPG00000012400	-	100	63.636	ENSDORG00000027504	Mrpl23	100	62.319	Dipodomys_ordii
ENSCAPG00000012400	-	100	36.552	FBgn0035335	mRpL23	97	36.552	Drosophila_melanogaster
ENSCAPG00000012400	-	100	63.514	ENSEASG00005000456	-	54	63.514	Equus_asinus_asinus
ENSCAPG00000012400	-	100	64.189	ENSECAG00000024486	-	51	64.189	Equus_caballus
ENSCAPG00000012400	-	100	51.020	ENSELUG00000022256	RM23	97	51.020	Esox_lucius
ENSCAPG00000012400	-	100	65.541	ENSFCAG00000018795	-	96	65.541	Felis_catus
ENSCAPG00000012400	-	98	53.793	ENSFALG00000011598	-	95	54.422	Ficedula_albicollis
ENSCAPG00000012400	-	100	76.923	ENSFDAG00000013606	-	96	76.923	Fukomys_damarensis
ENSCAPG00000012400	-	100	52.381	ENSFHEG00000010978	mrpl23	92	52.381	Fundulus_heteroclitus
ENSCAPG00000012400	-	98	48.276	ENSGMOG00000004509	mrpl23	100	48.276	Gadus_morhua
ENSCAPG00000012400	-	100	56.164	ENSGALG00000006561	-	68	56.164	Gallus_gallus
ENSCAPG00000012400	-	100	53.741	ENSGAFG00000021827	mrpl23	95	53.741	Gambusia_affinis
ENSCAPG00000012400	-	100	54.422	ENSGACG00000011130	mrpl23	95	54.422	Gasterosteus_aculeatus
ENSCAPG00000012400	-	100	56.463	ENSGAGG00000023827	-	95	56.463	Gopherus_agassizii
ENSCAPG00000012400	-	100	66.667	ENSGGOG00000000333	-	83	66.667	Gorilla_gorilla
ENSCAPG00000012400	-	100	55.102	ENSHBUG00000023397	mrpl23	95	55.102	Haplochromis_burtoni
ENSCAPG00000012400	-	100	71.329	ENSHGLG00000016722	-	96	71.329	Heterocephalus_glaber_female
ENSCAPG00000012400	-	100	71.329	ENSHGLG00100003075	-	96	71.329	Heterocephalus_glaber_male
ENSCAPG00000012400	-	100	51.701	ENSHCOG00000009092	mrpl23	95	51.701	Hippocampus_comes
ENSCAPG00000012400	-	100	52.381	ENSIPUG00000005383	mrpl23	96	52.381	Ictalurus_punctatus
ENSCAPG00000012400	-	100	63.448	ENSSTOG00000024573	-	96	63.265	Ictidomys_tridecemlineatus
ENSCAPG00000012400	-	100	65.035	ENSJJAG00000003519	Mrpl23	96	65.035	Jaculus_jaculus
ENSCAPG00000012400	-	100	52.381	ENSKMAG00000001599	mrpl23	95	52.381	Kryptolebias_marmoratus
ENSCAPG00000012400	-	100	53.741	ENSLBEG00000002580	mrpl23	95	53.741	Labrus_bergylta
ENSCAPG00000012400	-	100	53.741	ENSLACG00000011528	mrpl23	96	53.741	Latimeria_chalumnae
ENSCAPG00000012400	-	100	54.422	ENSLOCG00000001825	mrpl23	96	54.422	Lepisosteus_oculatus
ENSCAPG00000012400	-	100	65.986	ENSMFAG00000034529	-	96	65.986	Macaca_fascicularis
ENSCAPG00000012400	-	67	51.923	ENSMFAG00000039715	-	100	51.923	Macaca_fascicularis
ENSCAPG00000012400	-	100	65.986	ENSMMUG00000031268	MRPL23	96	65.986	Macaca_mulatta
ENSCAPG00000012400	-	67	51.923	ENSMNEG00000033446	-	100	51.923	Macaca_nemestrina
ENSCAPG00000012400	-	100	65.306	ENSMNEG00000036690	-	96	65.306	Macaca_nemestrina
ENSCAPG00000012400	-	100	65.306	ENSMLEG00000015767	-	100	65.306	Mandrillus_leucophaeus
ENSCAPG00000012400	-	100	54.422	ENSMAMG00000003609	mrpl23	96	53.521	Mastacembelus_armatus
ENSCAPG00000012400	-	100	55.782	ENSMZEG00005017456	mrpl23	95	55.782	Maylandia_zebra
ENSCAPG00000012400	-	100	56.164	ENSMGAG00000007978	-	97	56.164	Meleagris_gallopavo
ENSCAPG00000012400	-	100	67.133	ENSMAUG00000018693	Mrpl23	100	67.133	Mesocricetus_auratus
ENSCAPG00000012400	-	100	65.734	ENSMICG00000042091	-	94	64.626	Microcebus_murinus
ENSCAPG00000012400	-	100	67.133	ENSMOCG00000018436	Mrpl23	96	67.133	Microtus_ochrogaster
ENSCAPG00000012400	-	100	53.061	ENSMMOG00000018097	mrpl23	95	53.061	Mola_mola
ENSCAPG00000012400	-	100	63.265	ENSMODG00000003437	-	96	63.265	Monodelphis_domestica
ENSCAPG00000012400	-	100	54.422	ENSMALG00000014571	mrpl23	99	53.741	Monopterus_albus
ENSCAPG00000012400	-	100	64.336	MGP_CAROLIEiJ_G0030727	Mrpl23	96	64.336	Mus_caroli
ENSCAPG00000012400	-	100	63.636	ENSMUSG00000037772	Mrpl23	96	63.636	Mus_musculus
ENSCAPG00000012400	-	100	65.734	MGP_PahariEiJ_G0013923	Mrpl23	96	65.734	Mus_pahari
ENSCAPG00000012400	-	100	64.336	MGP_SPRETEiJ_G0031836	Mrpl23	96	64.336	Mus_spretus
ENSCAPG00000012400	-	100	59.459	ENSMPUG00000002923	-	95	59.459	Mustela_putorius_furo
ENSCAPG00000012400	-	100	63.333	ENSMPUG00000005658	-	96	64.000	Mustela_putorius_furo
ENSCAPG00000012400	-	75	70.270	ENSNGAG00000012877	-	83	70.270	Nannospalax_galili
ENSCAPG00000012400	-	100	62.329	ENSNGAG00000023444	-	100	62.329	Nannospalax_galili
ENSCAPG00000012400	-	100	55.782	ENSNBRG00000007183	mrpl23	95	55.782	Neolamprologus_brichardi
ENSCAPG00000012400	-	100	65.306	ENSNLEG00000026950	-	96	65.306	Nomascus_leucogenys
ENSCAPG00000012400	-	58	88.406	ENSOPRG00000018353	-	51	88.406	Ochotona_princeps
ENSCAPG00000012400	-	100	69.863	ENSODEG00000017262	-	96	69.863	Octodon_degus
ENSCAPG00000012400	-	99	60.690	ENSODEG00000012131	-	95	60.690	Octodon_degus
ENSCAPG00000012400	-	100	55.782	ENSONIG00000014500	mrpl23	92	55.782	Oreochromis_niloticus
ENSCAPG00000012400	-	99	53.425	ENSORLG00000025383	mrpl23	95	53.425	Oryzias_latipes
ENSCAPG00000012400	-	99	52.740	ENSORLG00020008379	mrpl23	95	52.055	Oryzias_latipes_hni
ENSCAPG00000012400	-	100	53.061	ENSOMEG00000019132	mrpl23	76	53.061	Oryzias_melastigma
ENSCAPG00000012400	-	100	65.306	ENSOGAG00000029988	-	96	65.306	Otolemur_garnettii
ENSCAPG00000012400	-	92	63.768	ENSOARG00000000706	-	86	63.768	Ovis_aries
ENSCAPG00000012400	-	100	66.667	ENSPPAG00000034414	-	96	66.667	Pan_paniscus
ENSCAPG00000012400	-	100	65.541	ENSPPRG00000013232	-	97	65.541	Panthera_pardus
ENSCAPG00000012400	-	100	66.667	ENSPTRG00000033746	MRPL23	96	66.667	Pan_troglodytes
ENSCAPG00000012400	-	100	65.986	ENSPANG00000018813	-	96	65.986	Papio_anubis
ENSCAPG00000012400	-	100	51.020	ENSPKIG00000001102	mrpl23	96	51.020	Paramormyrops_kingsleyae
ENSCAPG00000012400	-	84	51.562	ENSPSIG00000012834	-	100	51.562	Pelodiscus_sinensis
ENSCAPG00000012400	-	96	47.183	ENSPMGG00000006407	mrpl23	96	47.183	Periophthalmus_magnuspinnatus
ENSCAPG00000012400	-	100	62.937	ENSPEMG00000018572	Mrpl23	96	65.035	Peromyscus_maniculatus_bairdii
ENSCAPG00000012400	-	99	48.299	ENSPMAG00000005259	mrpl23	95	48.299	Petromyzon_marinus
ENSCAPG00000012400	-	100	51.701	ENSPFOG00000014159	mrpl23	95	51.701	Poecilia_formosa
ENSCAPG00000012400	-	100	52.381	ENSPLAG00000023456	mrpl23	96	52.381	Poecilia_latipinna
ENSCAPG00000012400	-	100	53.061	ENSPMEG00000012252	mrpl23	95	53.061	Poecilia_mexicana
ENSCAPG00000012400	-	100	52.381	ENSPREG00000019951	mrpl23	95	52.381	Poecilia_reticulata
ENSCAPG00000012400	-	100	65.986	ENSPPYG00000002918	-	96	65.986	Pongo_abelii
ENSCAPG00000012400	-	100	65.306	ENSPCOG00000026555	-	100	65.306	Propithecus_coquereli
ENSCAPG00000012400	-	100	55.782	ENSPNYG00000015541	mrpl23	95	55.782	Pundamilia_nyererei
ENSCAPG00000012400	-	100	51.701	ENSPNAG00000010548	mrpl23	96	51.701	Pygocentrus_nattereri
ENSCAPG00000012400	-	100	65.035	ENSRNOG00000020354	Mrpl23	96	65.035	Rattus_norvegicus
ENSCAPG00000012400	-	100	65.986	ENSRBIG00000041638	-	96	65.986	Rhinopithecus_bieti
ENSCAPG00000012400	-	100	65.986	ENSRROG00000004661	-	100	65.986	Rhinopithecus_roxellana
ENSCAPG00000012400	-	100	68.966	ENSSBOG00000025338	-	81	68.966	Saimiri_boliviensis_boliviensis
ENSCAPG00000012400	-	100	63.265	ENSSHAG00000002716	-	100	63.265	Sarcophilus_harrisii
ENSCAPG00000012400	-	100	50.340	ENSSFOG00015002519	mrpl23	96	50.340	Scleropages_formosus
ENSCAPG00000012400	-	100	52.381	ENSSMAG00000009264	mrpl23	95	52.381	Scophthalmus_maximus
ENSCAPG00000012400	-	100	54.422	ENSSDUG00000019634	mrpl23	99	54.422	Seriola_dumerili
ENSCAPG00000012400	-	100	54.422	ENSSLDG00000012055	mrpl23	95	54.422	Seriola_lalandi_dorsalis
ENSCAPG00000012400	-	100	53.741	ENSSPUG00000002656	-	96	53.741	Sphenodon_punctatus
ENSCAPG00000012400	-	100	55.782	ENSSPAG00000001601	mrpl23	99	55.782	Stegastes_partitus
ENSCAPG00000012400	-	100	64.583	ENSSSCG00000038364	-	96	64.583	Sus_scrofa
ENSCAPG00000012400	-	100	53.061	ENSTGUG00000009338	MRPL23	100	53.061	Taeniopygia_guttata
ENSCAPG00000012400	-	100	52.381	ENSTRUG00000009637	mrpl23	95	52.381	Takifugu_rubripes
ENSCAPG00000012400	-	57	71.642	ENSTNIG00000010463	mrpl23	72	71.642	Tetraodon_nigroviridis
ENSCAPG00000012400	-	100	68.919	ENSUAMG00000020867	-	96	68.919	Ursus_americanus
ENSCAPG00000012400	-	100	68.919	ENSUMAG00000006227	-	82	68.919	Ursus_maritimus
ENSCAPG00000012400	-	100	68.027	ENSVVUG00000002581	-	75	68.027	Vulpes_vulpes
ENSCAPG00000012400	-	100	50.340	ENSXETG00000014017	mrpl23	96	50.340	Xenopus_tropicalis
ENSCAPG00000012400	-	100	57.895	ENSXCOG00000020628	mrpl23	96	57.895	Xiphophorus_couchianus
ENSCAPG00000012400	-	100	53.061	ENSXMAG00000015496	mrpl23	95	53.061	Xiphophorus_maculatus