EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000012562 (Gene tree)
Gene ID: -
Gene Symbol: TRMT1L
Alias: C1orf25
Full Name: tRNA methyltransferase 1 like
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 28904 bases
Position: chrAVPZ01000034.1:35592992-35621895
Accession: 16782
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000011504	TRM	PF02005.16	7.2e-28	1	3
ENSCAPP00000011504	TRM	PF02005.16	7.2e-28	2	3
ENSCAPP00000011504	TRM	PF02005.16	7.2e-28	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000015248	TRMT1L-201	1680	-	ENSCAPP00000011504	559 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000012562's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000012562's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000012562	TRMT1L	89	90.942	ENSG00000121486	TRMT1L	72	91.304	Homo_sapiens
ENSCAPG00000012562	TRMT1L	76	63.673	ENSAPOG00000011807	trmt1l	69	63.673	Acanthochromis_polyacanthus
ENSCAPG00000012562	TRMT1L	89	88.406	ENSAMEG00000013538	TRMT1L	71	88.768	Ailuropoda_melanoleuca
ENSCAPG00000012562	TRMT1L	58	61.728	ENSACIG00000012049	trmt1l	61	61.728	Amphilophus_citrinellus
ENSCAPG00000012562	TRMT1L	86	63.525	ENSAOCG00000018112	trmt1l	76	62.140	Amphiprion_ocellaris
ENSCAPG00000012562	TRMT1L	86	63.934	ENSAPEG00000021433	trmt1l	76	62.551	Amphiprion_percula
ENSCAPG00000012562	TRMT1L	82	62.257	ENSATEG00000004573	trmt1l	79	62.257	Anabas_testudineus
ENSCAPG00000012562	TRMT1L	91	66.791	ENSAPLG00000008394	TRMT1L	73	66.791	Anas_platyrhynchos
ENSCAPG00000012562	TRMT1L	84	70.866	ENSACAG00000002342	TRMT1L	69	70.866	Anolis_carolinensis
ENSCAPG00000012562	TRMT1L	88	89.855	ENSANAG00000038162	TRMT1L	72	90.217	Aotus_nancymaae
ENSCAPG00000012562	TRMT1L	76	62.449	ENSACLG00000021625	trmt1l	69	62.041	Astatotilapia_calliptera
ENSCAPG00000012562	TRMT1L	83	64.615	ENSAMXG00000009602	trmt1l	69	63.846	Astyanax_mexicanus
ENSCAPG00000012562	TRMT1L	88	89.493	ENSBTAG00000011285	TRMT1L	71	89.493	Bos_taurus
ENSCAPG00000012562	TRMT1L	88	89.493	ENSCJAG00000005456	TRMT1L	72	89.855	Callithrix_jacchus
ENSCAPG00000012562	TRMT1L	89	90.182	ENSCAFG00000013518	TRMT1L	70	90.545	Canis_familiaris
ENSCAPG00000012562	TRMT1L	89	90.217	ENSCAFG00020015640	TRMT1L	71	90.580	Canis_lupus_dingo
ENSCAPG00000012562	TRMT1L	88	89.493	ENSCHIG00000016522	TRMT1L	71	89.855	Capra_hircus
ENSCAPG00000012562	TRMT1L	89	92.029	ENSTSYG00000010465	TRMT1L	73	92.029	Carlito_syrichta
ENSCAPG00000012562	TRMT1L	88	99.273	ENSCPOG00000001567	TRMT1L	73	99.273	Cavia_porcellus
ENSCAPG00000012562	TRMT1L	88	89.855	ENSCCAG00000018699	TRMT1L	72	90.217	Cebus_capucinus
ENSCAPG00000012562	TRMT1L	89	90.580	ENSCATG00000043114	TRMT1L	71	90.942	Cercocebus_atys
ENSCAPG00000012562	TRMT1L	88	95.273	ENSCLAG00000010801	-	73	95.273	Chinchilla_lanigera
ENSCAPG00000012562	TRMT1L	88	86.909	ENSCLAG00000010853	-	71	86.909	Chinchilla_lanigera
ENSCAPG00000012562	TRMT1L	89	90.580	ENSCSAG00000012880	TRMT1L	71	90.942	Chlorocebus_sabaeus
ENSCAPG00000012562	TRMT1L	90	71.910	ENSCPBG00000015694	TRMT1L	73	71.910	Chrysemys_picta_bellii
ENSCAPG00000012562	TRMT1L	89	91.667	ENSCANG00000031107	TRMT1L	71	90.580	Colobus_angolensis_palliatus
ENSCAPG00000012562	TRMT1L	88	88.043	ENSCGRG00001019297	Trmt1l	72	88.043	Cricetulus_griseus_chok1gshd
ENSCAPG00000012562	TRMT1L	88	88.043	ENSCGRG00000005036	Trmt1l	72	88.043	Cricetulus_griseus_crigri
ENSCAPG00000012562	TRMT1L	84	59.375	ENSCSEG00000001248	trmt1l	74	58.203	Cynoglossus_semilaevis
ENSCAPG00000012562	TRMT1L	77	63.374	ENSCVAG00000012274	trmt1l	70	60.465	Cyprinodon_variegatus
ENSCAPG00000012562	TRMT1L	83	60.769	ENSDARG00000042057	trmt1l	74	60.465	Danio_rerio
ENSCAPG00000012562	TRMT1L	90	88.406	ENSDNOG00000005239	TRMT1L	72	88.768	Dasypus_novemcinctus
ENSCAPG00000012562	TRMT1L	68	86.923	ENSDORG00000003298	Trmt1l	64	86.538	Dipodomys_ordii
ENSCAPG00000012562	TRMT1L	83	83.636	ENSETEG00000015895	TRMT1L	62	95.652	Echinops_telfairi
ENSCAPG00000012562	TRMT1L	89	45.038	ENSEBUG00000010301	trmt1l	75	45.038	Eptatretus_burgeri
ENSCAPG00000012562	TRMT1L	89	91.304	ENSEASG00005005551	TRMT1L	71	90.580	Equus_asinus_asinus
ENSCAPG00000012562	TRMT1L	89	91.273	ENSECAG00000020999	TRMT1L	67	90.545	Equus_caballus
ENSCAPG00000012562	TRMT1L	89	67.153	ENSEEUG00000014110	TRMT1L	75	67.871	Erinaceus_europaeus
ENSCAPG00000012562	TRMT1L	75	66.529	ENSELUG00000020587	trmt1l	67	65.833	Esox_lucius
ENSCAPG00000012562	TRMT1L	89	90.217	ENSFCAG00000011285	TRMT1L	72	89.855	Felis_catus
ENSCAPG00000012562	TRMT1L	92	64.727	ENSFALG00000003177	TRMT1L	80	64.727	Ficedula_albicollis
ENSCAPG00000012562	TRMT1L	88	93.818	ENSFDAG00000008822	TRMT1L	72	93.455	Fukomys_damarensis
ENSCAPG00000012562	TRMT1L	66	62.162	ENSFHEG00000014328	trmt1l	75	61.868	Fundulus_heteroclitus
ENSCAPG00000012562	TRMT1L	80	62.500	ENSGMOG00000009535	trmt1l	75	62.500	Gadus_morhua
ENSCAPG00000012562	TRMT1L	91	64.103	ENSGALG00000033077	TRMT1L	68	64.103	Gallus_gallus
ENSCAPG00000012562	TRMT1L	78	58.687	ENSGAFG00000012445	trmt1l	70	58.366	Gambusia_affinis
ENSCAPG00000012562	TRMT1L	81	62.857	ENSGACG00000005050	trmt1l	76	62.449	Gasterosteus_aculeatus
ENSCAPG00000012562	TRMT1L	91	70.463	ENSGAGG00000007441	TRMT1L	70	70.463	Gopherus_agassizii
ENSCAPG00000012562	TRMT1L	89	90.217	ENSGGOG00000011778	TRMT1L	72	90.580	Gorilla_gorilla
ENSCAPG00000012562	TRMT1L	76	62.041	ENSHBUG00000000622	trmt1l	74	59.671	Haplochromis_burtoni
ENSCAPG00000012562	TRMT1L	88	83.214	ENSHGLG00000012595	-	74	83.214	Heterocephalus_glaber_female
ENSCAPG00000012562	TRMT1L	88	94.182	ENSHGLG00000003135	-	71	94.182	Heterocephalus_glaber_female
ENSCAPG00000012562	TRMT1L	88	83.214	ENSHGLG00100004569	-	74	83.214	Heterocephalus_glaber_male
ENSCAPG00000012562	TRMT1L	88	94.182	ENSHGLG00100019412	-	73	94.182	Heterocephalus_glaber_male
ENSCAPG00000012562	TRMT1L	81	64.167	ENSIPUG00000008873	trmt1l	74	62.917	Ictalurus_punctatus
ENSCAPG00000012562	TRMT1L	88	92.000	ENSSTOG00000010332	TRMT1L	72	92.000	Ictidomys_tridecemlineatus
ENSCAPG00000012562	TRMT1L	88	86.909	ENSJJAG00000010929	Trmt1l	74	86.909	Jaculus_jaculus
ENSCAPG00000012562	TRMT1L	77	59.839	ENSKMAG00000010310	trmt1l	68	59.839	Kryptolebias_marmoratus
ENSCAPG00000012562	TRMT1L	83	59.533	ENSLBEG00000003487	trmt1l	70	59.533	Labrus_bergylta
ENSCAPG00000012562	TRMT1L	72	60.309	ENSLBEG00000007982	-	67	60.309	Labrus_bergylta
ENSCAPG00000012562	TRMT1L	82	66.279	ENSLACG00000008447	TRMT1L	75	65.504	Latimeria_chalumnae
ENSCAPG00000012562	TRMT1L	83	67.063	ENSLOCG00000001781	trmt1l	69	66.929	Lepisosteus_oculatus
ENSCAPG00000012562	TRMT1L	88	88.406	ENSLAFG00000004339	TRMT1L	72	89.130	Loxodonta_africana
ENSCAPG00000012562	TRMT1L	89	90.580	ENSMFAG00000037592	TRMT1L	71	90.942	Macaca_fascicularis
ENSCAPG00000012562	TRMT1L	89	91.667	ENSMMUG00000013879	TRMT1L	75	91.304	Macaca_mulatta
ENSCAPG00000012562	TRMT1L	89	90.580	ENSMNEG00000041637	TRMT1L	71	90.942	Macaca_nemestrina
ENSCAPG00000012562	TRMT1L	89	90.580	ENSMLEG00000004840	TRMT1L	71	90.942	Mandrillus_leucophaeus
ENSCAPG00000012562	TRMT1L	81	63.598	ENSMAMG00000015305	trmt1l	77	63.180	Mastacembelus_armatus
ENSCAPG00000012562	TRMT1L	76	62.449	ENSMZEG00005017822	trmt1l	69	62.041	Maylandia_zebra
ENSCAPG00000012562	TRMT1L	92	63.571	ENSMGAG00000000930	TRMT1L	80	63.538	Meleagris_gallopavo
ENSCAPG00000012562	TRMT1L	88	79.715	ENSMAUG00000019870	Trmt1l	73	79.715	Mesocricetus_auratus
ENSCAPG00000012562	TRMT1L	88	90.217	ENSMICG00000009494	TRMT1L	72	90.580	Microcebus_murinus
ENSCAPG00000012562	TRMT1L	88	84.420	ENSMOCG00000016453	Trmt1l	72	84.420	Microtus_ochrogaster
ENSCAPG00000012562	TRMT1L	80	62.869	ENSMMOG00000016961	trmt1l	75	61.864	Mola_mola
ENSCAPG00000012562	TRMT1L	87	75.277	ENSMODG00000007454	TRMT1L	60	75.277	Monodelphis_domestica
ENSCAPG00000012562	TRMT1L	75	62.241	ENSMALG00000019306	trmt1l	68	62.241	Monopterus_albus
ENSCAPG00000012562	TRMT1L	88	87.319	MGP_CAROLIEiJ_G0014693	Trmt1l	72	87.319	Mus_caroli
ENSCAPG00000012562	TRMT1L	88	87.319	ENSMUSG00000053286	Trmt1l	72	86.957	Mus_musculus
ENSCAPG00000012562	TRMT1L	88	87.681	MGP_PahariEiJ_G0027929	Trmt1l	72	86.594	Mus_pahari
ENSCAPG00000012562	TRMT1L	70	95.745	MGP_SPRETEiJ_G0015500	Trmt1l	68	95.745	Mus_spretus
ENSCAPG00000012562	TRMT1L	88	89.630	ENSMPUG00000011859	TRMT1L	71	90.000	Mustela_putorius_furo
ENSCAPG00000012562	TRMT1L	88	89.130	ENSMLUG00000001136	TRMT1L	73	89.493	Myotis_lucifugus
ENSCAPG00000012562	TRMT1L	88	88.768	ENSNGAG00000011685	Trmt1l	73	88.768	Nannospalax_galili
ENSCAPG00000012562	TRMT1L	56	63.235	ENSNBRG00000004053	trmt1l	76	62.774	Neolamprologus_brichardi
ENSCAPG00000012562	TRMT1L	89	90.942	ENSNLEG00000018030	TRMT1L	72	91.304	Nomascus_leucogenys
ENSCAPG00000012562	TRMT1L	72	91.489	ENSMEUG00000011344	TRMT1L	63	91.489	Notamacropus_eugenii
ENSCAPG00000012562	TRMT1L	87	78.467	ENSOPRG00000000680	TRMT1L	80	78.467	Ochotona_princeps
ENSCAPG00000012562	TRMT1L	88	92.000	ENSODEG00000000826	TRMT1L	72	92.000	Octodon_degus
ENSCAPG00000012562	TRMT1L	80	63.900	ENSONIG00000007823	trmt1l	78	63.485	Oreochromis_niloticus
ENSCAPG00000012562	TRMT1L	91	71.956	ENSOANG00000001010	TRMT1L	79	71.956	Ornithorhynchus_anatinus
ENSCAPG00000012562	TRMT1L	87	85.145	ENSOCUG00000004896	TRMT1L	74	84.058	Oryctolagus_cuniculus
ENSCAPG00000012562	TRMT1L	79	64.255	ENSORLG00000029610	trmt1l	78	61.660	Oryzias_latipes
ENSCAPG00000012562	TRMT1L	79	64.255	ENSORLG00020002203	trmt1l	69	63.900	Oryzias_latipes_hni
ENSCAPG00000012562	TRMT1L	79	63.830	ENSORLG00015021512	trmt1l	71	61.265	Oryzias_latipes_hsok
ENSCAPG00000012562	TRMT1L	69	62.447	ENSOMEG00000016275	trmt1l	60	62.447	Oryzias_melastigma
ENSCAPG00000012562	TRMT1L	88	76.866	ENSOGAG00000016186	TRMT1L	79	76.866	Otolemur_garnettii
ENSCAPG00000012562	TRMT1L	88	89.493	ENSOARG00000003786	TRMT1L	71	89.855	Ovis_aries
ENSCAPG00000012562	TRMT1L	89	91.304	ENSPPAG00000029141	TRMT1L	72	91.667	Pan_paniscus
ENSCAPG00000012562	TRMT1L	89	90.217	ENSPPRG00000023981	TRMT1L	72	89.855	Panthera_pardus
ENSCAPG00000012562	TRMT1L	89	90.217	ENSPTIG00000021754	TRMT1L	72	89.855	Panthera_tigris_altaica
ENSCAPG00000012562	TRMT1L	89	91.304	ENSPTRG00000001776	TRMT1L	72	91.667	Pan_troglodytes
ENSCAPG00000012562	TRMT1L	89	90.580	ENSPANG00000020890	TRMT1L	71	90.942	Papio_anubis
ENSCAPG00000012562	TRMT1L	82	62.598	ENSPKIG00000005941	trmt1l	70	62.205	Paramormyrops_kingsleyae
ENSCAPG00000012562	TRMT1L	86	71.103	ENSPSIG00000010011	TRMT1L	75	71.103	Pelodiscus_sinensis
ENSCAPG00000012562	TRMT1L	68	54.128	ENSPMGG00000021359	trmt1l	71	54.128	Periophthalmus_magnuspinnatus
ENSCAPG00000012562	TRMT1L	88	88.406	ENSPEMG00000000031	Trmt1l	73	88.406	Peromyscus_maniculatus_bairdii
ENSCAPG00000012562	TRMT1L	80	54.918	ENSPMAG00000005838	trmt1l	78	54.918	Petromyzon_marinus
ENSCAPG00000012562	TRMT1L	87	75.373	ENSPCIG00000002409	TRMT1L	69	75.373	Phascolarctos_cinereus
ENSCAPG00000012562	TRMT1L	83	60.536	ENSPFOG00000003872	trmt1l	79	60.232	Poecilia_formosa
ENSCAPG00000012562	TRMT1L	83	60.232	ENSPLAG00000010387	trmt1l	70	59.922	Poecilia_latipinna
ENSCAPG00000012562	TRMT1L	83	60.232	ENSPMEG00000011828	trmt1l	78	59.922	Poecilia_mexicana
ENSCAPG00000012562	TRMT1L	77	60.784	ENSPREG00000002866	trmt1l	69	60.474	Poecilia_reticulata
ENSCAPG00000012562	TRMT1L	88	90.942	ENSPPYG00000000416	TRMT1L	72	91.304	Pongo_abelii
ENSCAPG00000012562	TRMT1L	75	95.890	ENSPCAG00000008257	TRMT1L	61	95.890	Procavia_capensis
ENSCAPG00000012562	TRMT1L	74	82.090	ENSPCOG00000005682	TRMT1L	64	82.090	Propithecus_coquereli
ENSCAPG00000012562	TRMT1L	79	90.217	ENSPVAG00000005961	TRMT1L	60	90.580	Pteropus_vampyrus
ENSCAPG00000012562	TRMT1L	76	61.475	ENSPNYG00000005607	trmt1l	74	60.082	Pundamilia_nyererei
ENSCAPG00000012562	TRMT1L	76	65.323	ENSPNAG00000004389	trmt1l	68	64.516	Pygocentrus_nattereri
ENSCAPG00000012562	TRMT1L	88	86.957	ENSRNOG00000002580	Trmt1l	72	86.594	Rattus_norvegicus
ENSCAPG00000012562	TRMT1L	89	91.667	ENSRBIG00000042589	TRMT1L	71	90.580	Rhinopithecus_bieti
ENSCAPG00000012562	TRMT1L	89	91.667	ENSRROG00000032183	TRMT1L	71	90.580	Rhinopithecus_roxellana
ENSCAPG00000012562	TRMT1L	88	89.130	ENSSBOG00000029282	TRMT1L	72	89.493	Saimiri_boliviensis_boliviensis
ENSCAPG00000012562	TRMT1L	82	66.008	ENSSFOG00015004878	trmt1l	70	66.008	Scleropages_formosus
ENSCAPG00000012562	TRMT1L	52	63.303	ENSSMAG00000015425	trmt1l	70	63.303	Scophthalmus_maximus
ENSCAPG00000012562	TRMT1L	75	65.966	ENSSDUG00000021807	trmt1l	76	65.690	Seriola_dumerili
ENSCAPG00000012562	TRMT1L	75	65.126	ENSSLDG00000016579	trmt1l	76	65.272	Seriola_lalandi_dorsalis
ENSCAPG00000012562	TRMT1L	63	88.889	ENSSARG00000010135	TRMT1L	65	88.889	Sorex_araneus
ENSCAPG00000012562	TRMT1L	81	73.387	ENSSPUG00000003927	TRMT1L	77	72.984	Sphenodon_punctatus
ENSCAPG00000012562	TRMT1L	76	64.898	ENSSPAG00000008597	trmt1l	68	64.898	Stegastes_partitus
ENSCAPG00000012562	TRMT1L	89	85.507	ENSSSCG00000021393	TRMT1L	67	85.091	Sus_scrofa
ENSCAPG00000012562	TRMT1L	91	64.074	ENSTGUG00000003737	TRMT1L	77	64.074	Taeniopygia_guttata
ENSCAPG00000012562	TRMT1L	63	77.083	ENSTRUG00000002396	trmt1l	70	77.083	Takifugu_rubripes
ENSCAPG00000012562	TRMT1L	52	73.077	ENSTNIG00000005534	trmt1l	69	73.077	Tetraodon_nigroviridis
ENSCAPG00000012562	TRMT1L	77	84.158	ENSTBEG00000016498	TRMT1L	62	83.663	Tupaia_belangeri
ENSCAPG00000012562	TRMT1L	88	89.855	ENSTTRG00000005892	TRMT1L	72	90.217	Tursiops_truncatus
ENSCAPG00000012562	TRMT1L	89	88.406	ENSUAMG00000020936	TRMT1L	71	88.768	Ursus_americanus
ENSCAPG00000012562	TRMT1L	89	88.727	ENSUMAG00000021919	TRMT1L	70	89.091	Ursus_maritimus
ENSCAPG00000012562	TRMT1L	89	89.455	ENSVPAG00000011854	TRMT1L	80	89.455	Vicugna_pacos
ENSCAPG00000012562	TRMT1L	89	90.217	ENSVVUG00000009166	TRMT1L	71	90.580	Vulpes_vulpes
ENSCAPG00000012562	TRMT1L	63	65.185	ENSXETG00000004539	trmt1l	68	68.067	Xenopus_tropicalis
ENSCAPG00000012562	TRMT1L	77	59.592	ENSXCOG00000007372	trmt1l	70	59.184	Xiphophorus_couchianus
ENSCAPG00000012562	TRMT1L	78	60.392	ENSXMAG00000003575	trmt1l	76	58.039	Xiphophorus_maculatus