EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAPG00000012669 (Gene tree)
Gene ID: -
Gene Symbol: SNRPB
Alias: COD|SNRPB1|Sm-B/B'|SmB/SmB'|snRNP-B
Full Name: small nuclear ribonucleoprotein polypeptides B and B1
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 5280 bases
Position: chrAVPZ01000889.1:22057215-22062494
Accession: 11153
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000011649	LSM	PF01423.22	4.4e-20	1	1
ENSCAPP00000011646	LSM	PF01423.22	4.8e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000015392	SNRPB-201	726	-	ENSCAPP00000011646	241 (aa)	-	-
ENSCAPT00000015395	SNRPB-202	693	-	ENSCAPP00000011649	230 (aa)	-	UPI0007FE5787

Gene Model

Click here to download ENSCAPG00000012669's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000012669's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAPG00000012669	SNRPB	96	92.727	ENSCAPG00000003047	SNRPN	92	92.727

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000012669	SNRPB	100	100.000	ENSG00000125835	SNRPB	99	100.000	Homo_sapiens
ENSCAPG00000012669	SNRPB	78	92.778	ENSAPOG00000019606	snrpb	56	94.611	Acanthochromis_polyacanthus
ENSCAPG00000012669	SNRPB	100	99.585	ENSAMEG00000011353	SNRPB	99	99.585	Ailuropoda_melanoleuca
ENSCAPG00000012669	SNRPB	76	92.571	ENSACIG00000014480	snrpb	71	94.444	Amphilophus_citrinellus
ENSCAPG00000012669	SNRPB	78	92.778	ENSAOCG00000006876	snrpb	69	94.611	Amphiprion_ocellaris
ENSCAPG00000012669	SNRPB	78	92.778	ENSAPEG00000021585	snrpb	71	94.611	Amphiprion_percula
ENSCAPG00000012669	SNRPB	78	92.222	ENSATEG00000009836	snrpb	69	94.012	Anabas_testudineus
ENSCAPG00000012669	SNRPB	93	95.305	ENSACAG00000002053	SNRPB	92	95.305	Anolis_carolinensis
ENSCAPG00000012669	SNRPB	100	100.000	ENSANAG00000024443	-	99	100.000	Aotus_nancymaae
ENSCAPG00000012669	SNRPB	99	93.013	ENSANAG00000036271	-	76	93.085	Aotus_nancymaae
ENSCAPG00000012669	SNRPB	78	92.778	ENSACLG00000014707	snrpb	69	94.611	Astatotilapia_calliptera
ENSCAPG00000012669	SNRPB	76	92.857	ENSAMXG00000029434	snrpb	70	94.012	Astyanax_mexicanus
ENSCAPG00000012669	SNRPB	100	99.565	ENSBTAG00000001038	SNRPB	99	99.565	Bos_taurus
ENSCAPG00000012669	SNRPB	100	100.000	ENSCJAG00000020971	-	99	100.000	Callithrix_jacchus
ENSCAPG00000012669	SNRPB	93	92.019	ENSCJAG00000023097	-	78	92.021	Callithrix_jacchus
ENSCAPG00000012669	SNRPB	82	88.421	ENSCAFG00000031109	-	79	84.737	Canis_familiaris
ENSCAPG00000012669	SNRPB	100	100.000	ENSCAFG00000006693	-	99	100.000	Canis_familiaris
ENSCAPG00000012669	SNRPB	99	100.000	ENSCAFG00020016981	-	99	100.000	Canis_lupus_dingo
ENSCAPG00000012669	SNRPB	100	99.565	ENSCHIG00000025449	-	99	99.565	Capra_hircus
ENSCAPG00000012669	SNRPB	97	76.786	ENSTSYG00000032303	-	55	79.195	Carlito_syrichta
ENSCAPG00000012669	SNRPB	100	100.000	ENSTSYG00000014498	-	99	100.000	Carlito_syrichta
ENSCAPG00000012669	SNRPB	100	100.000	ENSCPOG00000039408	SNRPB	99	100.000	Cavia_porcellus
ENSCAPG00000012669	SNRPB	100	100.000	ENSCCAG00000026002	SNRPB	99	100.000	Cebus_capucinus
ENSCAPG00000012669	SNRPB	55	88.189	ENSCCAG00000035140	-	89	86.275	Cebus_capucinus
ENSCAPG00000012669	SNRPB	100	100.000	ENSCATG00000030230	SNRPB	99	100.000	Cercocebus_atys
ENSCAPG00000012669	SNRPB	98	100.000	ENSCLAG00000012442	SNRPB	99	98.745	Chinchilla_lanigera
ENSCAPG00000012669	SNRPB	100	100.000	ENSCSAG00000010840	SNRPB	99	100.000	Chlorocebus_sabaeus
ENSCAPG00000012669	SNRPB	99	96.653	ENSCPBG00000026801	SNRPB	99	96.653	Chrysemys_picta_bellii
ENSCAPG00000012669	SNRPB	100	100.000	ENSCANG00000019461	SNRPB	99	100.000	Colobus_angolensis_palliatus
ENSCAPG00000012669	SNRPB	100	100.000	ENSCGRG00001023046	Snrpb	99	100.000	Cricetulus_griseus_chok1gshd
ENSCAPG00000012669	SNRPB	96	100.000	ENSCGRG00000010423	Snrpb	98	100.000	Cricetulus_griseus_crigri
ENSCAPG00000012669	SNRPB	79	92.857	ENSCSEG00000020328	snrpb	69	94.611	Cynoglossus_semilaevis
ENSCAPG00000012669	SNRPB	73	92.814	ENSDARG00000011125	snrpb	69	94.611	Danio_rerio
ENSCAPG00000012669	SNRPB	99	100.000	ENSDNOG00000015545	-	99	100.000	Dasypus_novemcinctus
ENSCAPG00000012669	SNRPB	75	94.767	ENSDNOG00000007896	-	71	94.767	Dasypus_novemcinctus
ENSCAPG00000012669	SNRPB	97	99.552	ENSDORG00000029558	Snrpb	100	99.565	Dipodomys_ordii
ENSCAPG00000012669	SNRPB	64	70.270	FBgn0262601	SmB	73	70.270	Drosophila_melanogaster
ENSCAPG00000012669	SNRPB	79	78.571	ENSETEG00000006830	SNRPB	73	77.246	Echinops_telfairi
ENSCAPG00000012669	SNRPB	78	80.000	ENSEBUG00000007467	SNRPB	62	88.514	Eptatretus_burgeri
ENSCAPG00000012669	SNRPB	100	99.565	ENSEASG00005012991	SNRPB	99	99.565	Equus_asinus_asinus
ENSCAPG00000012669	SNRPB	100	100.000	ENSECAG00000011944	SNRPB	99	100.000	Equus_caballus
ENSCAPG00000012669	SNRPB	98	100.000	ENSEEUG00000015568	SNRPB	81	98.268	Erinaceus_europaeus
ENSCAPG00000012669	SNRPB	63	95.833	ENSELUG00000014564	snrpb	71	93.210	Esox_lucius
ENSCAPG00000012669	SNRPB	100	100.000	ENSFCAG00000034090	-	99	100.000	Felis_catus
ENSCAPG00000012669	SNRPB	96	96.121	ENSFALG00000004866	SNRPB	100	96.121	Ficedula_albicollis
ENSCAPG00000012669	SNRPB	100	100.000	ENSFDAG00000009937	SNRPB	99	100.000	Fukomys_damarensis
ENSCAPG00000012669	SNRPB	99	96.234	ENSGALG00000035421	SNRPN	99	96.234	Gallus_gallus
ENSCAPG00000012669	SNRPB	75	93.023	ENSGAFG00000019558	snrpb	73	93.491	Gambusia_affinis
ENSCAPG00000012669	SNRPB	79	91.209	ENSGACG00000003262	snrpb	69	94.611	Gasterosteus_aculeatus
ENSCAPG00000012669	SNRPB	99	96.653	ENSGAGG00000001308	SNRPB	99	96.653	Gopherus_agassizii
ENSCAPG00000012669	SNRPB	100	100.000	ENSGGOG00000016138	SNRPB	99	100.000	Gorilla_gorilla
ENSCAPG00000012669	SNRPB	78	92.778	ENSHBUG00000008369	snrpb	69	94.611	Haplochromis_burtoni
ENSCAPG00000012669	SNRPB	100	100.000	ENSHGLG00000016241	-	99	100.000	Heterocephalus_glaber_female
ENSCAPG00000012669	SNRPB	64	90.541	ENSHGLG00000016505	-	71	90.541	Heterocephalus_glaber_female
ENSCAPG00000012669	SNRPB	100	100.000	ENSHGLG00100012877	-	99	100.000	Heterocephalus_glaber_male
ENSCAPG00000012669	SNRPB	64	90.541	ENSHGLG00100004178	-	71	90.541	Heterocephalus_glaber_male
ENSCAPG00000012669	SNRPB	79	92.308	ENSHCOG00000014888	snrpb	69	94.611	Hippocampus_comes
ENSCAPG00000012669	SNRPB	73	92.814	ENSIPUG00000024569	SNRPB	69	94.611	Ictalurus_punctatus
ENSCAPG00000012669	SNRPB	94	81.944	ENSSTOG00000027821	-	62	99.265	Ictidomys_tridecemlineatus
ENSCAPG00000012669	SNRPB	99	98.326	ENSSTOG00000033664	-	99	98.326	Ictidomys_tridecemlineatus
ENSCAPG00000012669	SNRPB	100	100.000	ENSJJAG00000024170	Snrpb	99	100.000	Jaculus_jaculus
ENSCAPG00000012669	SNRPB	75	94.186	ENSKMAG00000014494	snrpb	68	95.210	Kryptolebias_marmoratus
ENSCAPG00000012669	SNRPB	79	92.308	ENSLBEG00000005678	snrpb	69	94.611	Labrus_bergylta
ENSCAPG00000012669	SNRPB	96	93.182	ENSLACG00000011459	SNRPB	92	93.182	Latimeria_chalumnae
ENSCAPG00000012669	SNRPB	73	94.012	ENSLOCG00000002687	snrpb	69	95.210	Lepisosteus_oculatus
ENSCAPG00000012669	SNRPB	99	96.053	ENSLAFG00000017588	SNRPB	99	96.070	Loxodonta_africana
ENSCAPG00000012669	SNRPB	100	100.000	ENSMFAG00000038756	SNRPB	99	100.000	Macaca_fascicularis
ENSCAPG00000012669	SNRPB	100	100.000	ENSMMUG00000010050	SNRPB	99	100.000	Macaca_mulatta
ENSCAPG00000012669	SNRPB	100	100.000	ENSMNEG00000027954	SNRPB	99	100.000	Macaca_nemestrina
ENSCAPG00000012669	SNRPB	100	100.000	ENSMLEG00000022346	SNRPB	99	100.000	Mandrillus_leucophaeus
ENSCAPG00000012669	SNRPB	78	92.778	ENSMAMG00000009294	snrpb	67	94.643	Mastacembelus_armatus
ENSCAPG00000012669	SNRPB	78	92.778	ENSMZEG00005011856	snrpb	69	94.611	Maylandia_zebra
ENSCAPG00000012669	SNRPB	97	85.268	ENSMICG00000015983	-	86	89.894	Microcebus_murinus
ENSCAPG00000012669	SNRPB	100	99.565	ENSMICG00000016519	SNRPB	99	99.565	Microcebus_murinus
ENSCAPG00000012669	SNRPB	100	99.565	ENSMOCG00000002892	-	99	99.565	Microtus_ochrogaster
ENSCAPG00000012669	SNRPB	72	69.880	ENSMOCG00000021362	-	71	73.256	Microtus_ochrogaster
ENSCAPG00000012669	SNRPB	79	92.308	ENSMMOG00000013226	snrpb	72	94.083	Mola_mola
ENSCAPG00000012669	SNRPB	78	92.222	ENSMALG00000020839	snrpb	56	94.012	Monopterus_albus
ENSCAPG00000012669	SNRPB	100	99.565	MGP_CAROLIEiJ_G0024293	Snrpb	99	99.565	Mus_caroli
ENSCAPG00000012669	SNRPB	100	99.565	ENSMUSG00000027404	Snrpb	99	99.565	Mus_musculus
ENSCAPG00000012669	SNRPB	100	99.565	MGP_PahariEiJ_G0025738	Snrpb	99	99.565	Mus_pahari
ENSCAPG00000012669	SNRPB	100	99.565	MGP_SPRETEiJ_G0025213	Snrpb	99	99.565	Mus_spretus
ENSCAPG00000012669	SNRPB	100	100.000	ENSMPUG00000009283	SNRPB	99	100.000	Mustela_putorius_furo
ENSCAPG00000012669	SNRPB	99	96.930	ENSMLUG00000016951	SNRPB	99	96.653	Myotis_lucifugus
ENSCAPG00000012669	SNRPB	100	100.000	ENSNGAG00000012051	Snrpb	99	100.000	Nannospalax_galili
ENSCAPG00000012669	SNRPB	77	91.525	ENSNBRG00000006353	snrpb	62	93.293	Neolamprologus_brichardi
ENSCAPG00000012669	SNRPB	99	100.000	ENSNLEG00000029067	SNRPB	99	100.000	Nomascus_leucogenys
ENSCAPG00000012669	SNRPB	98	97.333	ENSMEUG00000015625	SNRPB	100	97.333	Notamacropus_eugenii
ENSCAPG00000012669	SNRPB	100	100.000	ENSODEG00000004305	-	99	100.000	Octodon_degus
ENSCAPG00000012669	SNRPB	98	96.444	ENSODEG00000016060	-	99	95.397	Octodon_degus
ENSCAPG00000012669	SNRPB	78	92.778	ENSONIG00000000248	snrpb	69	94.611	Oreochromis_niloticus
ENSCAPG00000012669	SNRPB	93	94.860	ENSOCUG00000021456	-	78	95.745	Oryctolagus_cuniculus
ENSCAPG00000012669	SNRPB	77	93.258	ENSOCUG00000022423	-	86	96.407	Oryctolagus_cuniculus
ENSCAPG00000012669	SNRPB	93	71.831	ENSOCUG00000026813	-	64	70.667	Oryctolagus_cuniculus
ENSCAPG00000012669	SNRPB	99	97.071	ENSOCUG00000028215	-	99	97.071	Oryctolagus_cuniculus
ENSCAPG00000012669	SNRPB	99	99.582	ENSOCUG00000014042	-	99	99.582	Oryctolagus_cuniculus
ENSCAPG00000012669	SNRPB	79	92.265	ENSORLG00000021862	snrpb	69	94.611	Oryzias_latipes
ENSCAPG00000012669	SNRPB	99	100.000	ENSOGAG00000016149	SNRPB	99	100.000	Otolemur_garnettii
ENSCAPG00000012669	SNRPB	100	99.565	ENSOARG00000006740	SNRPB	99	99.565	Ovis_aries
ENSCAPG00000012669	SNRPB	100	100.000	ENSPPAG00000036314	SNRPB	99	100.000	Pan_paniscus
ENSCAPG00000012669	SNRPB	100	100.000	ENSPPRG00000003233	-	99	100.000	Panthera_pardus
ENSCAPG00000012669	SNRPB	100	100.000	ENSPTIG00000007468	SNRPB	99	100.000	Panthera_tigris_altaica
ENSCAPG00000012669	SNRPB	100	100.000	ENSPTRG00000013176	SNRPB	99	100.000	Pan_troglodytes
ENSCAPG00000012669	SNRPB	100	100.000	ENSPANG00000020362	SNRPB	99	100.000	Papio_anubis
ENSCAPG00000012669	SNRPB	73	92.216	ENSPKIG00000002865	snrpb	69	94.012	Paramormyrops_kingsleyae
ENSCAPG00000012669	SNRPB	100	96.266	ENSPSIG00000014125	SNRPB	99	96.266	Pelodiscus_sinensis
ENSCAPG00000012669	SNRPB	77	90.449	ENSPMGG00000016349	snrpb	69	92.025	Periophthalmus_magnuspinnatus
ENSCAPG00000012669	SNRPB	100	100.000	ENSPEMG00000007948	Snrpb	99	100.000	Peromyscus_maniculatus_bairdii
ENSCAPG00000012669	SNRPB	100	97.510	ENSPCIG00000004694	SNRPB	100	97.510	Phascolarctos_cinereus
ENSCAPG00000012669	SNRPB	83	76.842	ENSPREG00000015515	snrpb	62	95.556	Poecilia_reticulata
ENSCAPG00000012669	SNRPB	100	100.000	ENSPPYG00000010841	SNRPB	99	100.000	Pongo_abelii
ENSCAPG00000012669	SNRPB	100	100.000	ENSPCOG00000013686	SNRPB	99	100.000	Propithecus_coquereli
ENSCAPG00000012669	SNRPB	98	98.673	ENSPVAG00000017013	SNRPB	79	98.673	Pteropus_vampyrus
ENSCAPG00000012669	SNRPB	78	92.778	ENSPNYG00000014788	snrpb	69	94.611	Pundamilia_nyererei
ENSCAPG00000012669	SNRPB	77	93.220	ENSPNAG00000016126	snrpb	69	94.611	Pygocentrus_nattereri
ENSCAPG00000012669	SNRPB	100	100.000	ENSRNOG00000006961	Snrpb	99	100.000	Rattus_norvegicus
ENSCAPG00000012669	SNRPB	100	99.565	ENSRBIG00000040505	SNRPB	99	99.582	Rhinopithecus_bieti
ENSCAPG00000012669	SNRPB	100	100.000	ENSRROG00000036094	SNRPB	99	100.000	Rhinopithecus_roxellana
ENSCAPG00000012669	SNRPB	100	100.000	ENSSBOG00000027310	SNRPB	99	100.000	Saimiri_boliviensis_boliviensis
ENSCAPG00000012669	SNRPB	99	98.326	ENSSHAG00000010394	SNRPB	99	98.326	Sarcophilus_harrisii
ENSCAPG00000012669	SNRPB	73	92.216	ENSSFOG00015002870	snrpb	70	93.413	Scleropages_formosus
ENSCAPG00000012669	SNRPB	79	91.758	ENSSMAG00000006766	snrpb	69	94.012	Scophthalmus_maximus
ENSCAPG00000012669	SNRPB	78	92.778	ENSSDUG00000018539	snrpb	69	94.611	Seriola_dumerili
ENSCAPG00000012669	SNRPB	78	92.778	ENSSLDG00000022391	snrpb	69	94.611	Seriola_lalandi_dorsalis
ENSCAPG00000012669	SNRPB	75	84.884	ENSSARG00000003084	SNRPB	74	84.884	Sorex_araneus
ENSCAPG00000012669	SNRPB	99	96.653	ENSSPUG00000015659	SNRPB	100	96.653	Sphenodon_punctatus
ENSCAPG00000012669	SNRPB	78	92.778	ENSSPAG00000021992	snrpb	69	94.611	Stegastes_partitus
ENSCAPG00000012669	SNRPB	100	99.565	ENSSSCG00000040857	-	99	99.565	Sus_scrofa
ENSCAPG00000012669	SNRPB	100	80.435	ENSSSCG00000011966	-	90	76.303	Sus_scrofa
ENSCAPG00000012669	SNRPB	77	79.661	ENSTGUG00000005684	SNRPB	59	96.429	Taeniopygia_guttata
ENSCAPG00000012669	SNRPB	79	91.758	ENSTRUG00000023094	snrpb	72	94.012	Takifugu_rubripes
ENSCAPG00000012669	SNRPB	79	91.758	ENSTNIG00000002991	snrpb	69	94.012	Tetraodon_nigroviridis
ENSCAPG00000012669	SNRPB	75	100.000	ENSUAMG00000005984	-	82	100.000	Ursus_americanus
ENSCAPG00000012669	SNRPB	60	99.270	ENSUMAG00000002123	-	63	99.270	Ursus_maritimus
ENSCAPG00000012669	SNRPB	99	99.582	ENSVVUG00000025654	-	99	99.582	Vulpes_vulpes
ENSCAPG00000012669	SNRPB	97	79.646	ENSVVUG00000010086	-	84	81.026	Vulpes_vulpes
ENSCAPG00000012669	SNRPB	64	43.373	ENSVVUG00000018297	-	52	43.373	Vulpes_vulpes
ENSCAPG00000012669	SNRPB	91	95.455	ENSXETG00000027266	snrpb	93	95.455	Xenopus_tropicalis
ENSCAPG00000012669	SNRPB	93	65.022	ENSXMAG00000028767	snrpb	58	95.556	Xiphophorus_maculatus