EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000012811 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Minus strand
Length: 3389 bases
Position: chrAVPZ01000678.1:2864771-2868159
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000011823	tRNA_int_endo	PF01974.17	4.9e-21	1	1
ENSCAPP00000011818	tRNA_int_endo	PF01974.17	5.2e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000015566	-	612	-	ENSCAPP00000011818	203 (aa)	-	-
ENSCAPT00000015571	-	597	-	ENSCAPP00000011823	198 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000012811's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000012811's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000012811	-	99	80.296	ENSG00000170892	TSEN34	65	80.296	Homo_sapiens
ENSCAPG00000012811	-	94	79.058	ENSAMEG00000004585	TSEN34	67	79.058	Ailuropoda_melanoleuca
ENSCAPG00000012811	-	78	45.625	ENSATEG00000019800	tsen34	56	45.625	Anabas_testudineus
ENSCAPG00000012811	-	67	59.848	ENSACAG00000016189	TSEN34	63	48.744	Anolis_carolinensis
ENSCAPG00000012811	-	99	81.281	ENSANAG00000026113	TSEN34	65	81.281	Aotus_nancymaae
ENSCAPG00000012811	-	99	78.922	ENSBTAG00000006486	TSEN34	66	78.922	Bos_taurus
ENSCAPG00000012811	-	99	78.713	ENSCJAG00000001128	TSEN34	64	78.713	Callithrix_jacchus
ENSCAPG00000012811	-	99	79.024	ENSCAFG00000002675	TSEN34	66	79.024	Canis_familiaris
ENSCAPG00000012811	-	99	79.803	ENSCAFG00020018350	TSEN34	65	79.803	Canis_lupus_dingo
ENSCAPG00000012811	-	99	76.355	ENSCHIG00000020705	TSEN34	65	76.355	Capra_hircus
ENSCAPG00000012811	-	97	78.283	ENSTSYG00000028200	TSEN34	64	78.283	Carlito_syrichta
ENSCAPG00000012811	-	100	95.122	ENSCPOG00000012672	TSEN34	66	95.122	Cavia_porcellus
ENSCAPG00000012811	-	99	80.296	ENSCCAG00000036023	TSEN34	65	80.296	Cebus_capucinus
ENSCAPG00000012811	-	94	79.058	ENSCATG00000033390	TSEN34	60	79.058	Cercocebus_atys
ENSCAPG00000012811	-	99	83.168	ENSCLAG00000000618	TSEN34	65	83.168	Chinchilla_lanigera
ENSCAPG00000012811	-	99	80.788	ENSCSAG00000001891	TSEN34	65	80.788	Chlorocebus_sabaeus
ENSCAPG00000012811	-	99	80.788	ENSCANG00000040984	TSEN34	65	80.788	Colobus_angolensis_palliatus
ENSCAPG00000012811	-	99	79.327	ENSCGRG00001006296	Tsen34	66	79.327	Cricetulus_griseus_chok1gshd
ENSCAPG00000012811	-	98	74.178	ENSCGRG00000008494	Tsen34	90	76.526	Cricetulus_griseus_crigri
ENSCAPG00000012811	-	99	40.000	ENSCSEG00000006278	tsen34	67	40.000	Cynoglossus_semilaevis
ENSCAPG00000012811	-	99	83.251	ENSDNOG00000039332	TSEN34	67	83.251	Dasypus_novemcinctus
ENSCAPG00000012811	-	99	80.000	ENSDORG00000029071	Tsen34	65	80.000	Dipodomys_ordii
ENSCAPG00000012811	-	99	82.266	ENSEASG00005021580	TSEN34	65	82.266	Equus_asinus_asinus
ENSCAPG00000012811	-	99	81.281	ENSECAG00000019651	TSEN34	56	81.281	Equus_caballus
ENSCAPG00000012811	-	79	77.019	ENSEEUG00000005692	TSEN34	57	77.019	Erinaceus_europaeus
ENSCAPG00000012811	-	99	81.773	ENSFCAG00000014045	TSEN34	65	81.773	Felis_catus
ENSCAPG00000012811	-	99	84.653	ENSFDAG00000017995	TSEN34	77	84.653	Fukomys_damarensis
ENSCAPG00000012811	-	67	49.265	ENSGMOG00000001961	tsen34	71	48.227	Gadus_morhua
ENSCAPG00000012811	-	99	80.296	ENSGGOG00000008197	TSEN34	65	80.296	Gorilla_gorilla
ENSCAPG00000012811	-	99	83.981	ENSHGLG00000017619	TSEN34	65	83.981	Heterocephalus_glaber_female
ENSCAPG00000012811	-	99	77.033	ENSHGLG00100008719	TSEN34	76	77.184	Heterocephalus_glaber_male
ENSCAPG00000012811	-	99	78.818	ENSSTOG00000023816	TSEN34	65	78.818	Ictidomys_tridecemlineatus
ENSCAPG00000012811	-	99	78.155	ENSJJAG00000016301	Tsen34	66	78.155	Jaculus_jaculus
ENSCAPG00000012811	-	99	43.062	ENSLACG00000013346	-	88	43.062	Latimeria_chalumnae
ENSCAPG00000012811	-	71	48.936	ENSLOCG00000001887	tsen34	50	48.936	Lepisosteus_oculatus
ENSCAPG00000012811	-	99	79.426	ENSLAFG00000015215	TSEN34	66	79.426	Loxodonta_africana
ENSCAPG00000012811	-	99	81.281	ENSMFAG00000044825	TSEN34	65	81.281	Macaca_fascicularis
ENSCAPG00000012811	-	99	81.281	ENSMMUG00000016571	TSEN34	65	81.281	Macaca_mulatta
ENSCAPG00000012811	-	99	81.281	ENSMNEG00000045457	TSEN34	65	81.281	Macaca_nemestrina
ENSCAPG00000012811	-	94	80.628	ENSMLEG00000034295	TSEN34	72	80.628	Mandrillus_leucophaeus
ENSCAPG00000012811	-	67	50.725	ENSMAMG00000018407	tsen34	50	49.655	Mastacembelus_armatus
ENSCAPG00000012811	-	99	81.773	ENSMICG00000002409	TSEN34	74	81.773	Microcebus_murinus
ENSCAPG00000012811	-	99	77.251	ENSMOCG00000022190	Tsen34	66	77.251	Microtus_ochrogaster
ENSCAPG00000012811	-	67	54.545	ENSMMOG00000009551	tsen34	55	53.237	Mola_mola
ENSCAPG00000012811	-	99	76.667	MGP_CAROLIEiJ_G0029099	Tsen34	66	76.667	Mus_caroli
ENSCAPG00000012811	-	99	78.537	ENSMUSG00000035585	Tsen34	97	82.143	Mus_musculus
ENSCAPG00000012811	-	99	78.095	MGP_PahariEiJ_G0020968	Tsen34	66	78.095	Mus_pahari
ENSCAPG00000012811	-	99	76.667	MGP_SPRETEiJ_G0030152	Tsen34	66	76.667	Mus_spretus
ENSCAPG00000012811	-	99	78.818	ENSMPUG00000010373	TSEN34	65	78.818	Mustela_putorius_furo
ENSCAPG00000012811	-	99	79.126	ENSMLUG00000016894	TSEN34	66	79.126	Myotis_lucifugus
ENSCAPG00000012811	-	78	67.879	ENSNGAG00000016187	Tsen34	58	67.879	Nannospalax_galili
ENSCAPG00000012811	-	67	50.000	ENSNBRG00000008640	tsen34	50	48.921	Neolamprologus_brichardi
ENSCAPG00000012811	-	99	79.803	ENSNLEG00000006309	TSEN34	65	79.803	Nomascus_leucogenys
ENSCAPG00000012811	-	69	75.000	ENSMEUG00000002978	TSEN34	50	75.000	Notamacropus_eugenii
ENSCAPG00000012811	-	99	74.038	ENSODEG00000000096	TSEN34	66	74.762	Octodon_degus
ENSCAPG00000012811	-	68	48.921	ENSONIG00000017253	tsen34	51	48.921	Oreochromis_niloticus
ENSCAPG00000012811	-	100	54.146	ENSOANG00000014747	-	85	54.146	Ornithorhynchus_anatinus
ENSCAPG00000012811	-	67	51.515	ENSORLG00015012740	tsen34	68	40.291	Oryzias_latipes_hsok
ENSCAPG00000012811	-	89	44.324	ENSOMEG00000016771	tsen34	67	42.289	Oryzias_melastigma
ENSCAPG00000012811	-	99	80.788	ENSOGAG00000006966	TSEN34	65	80.788	Otolemur_garnettii
ENSCAPG00000012811	-	99	76.471	ENSOARG00000002763	TSEN34	68	76.471	Ovis_aries
ENSCAPG00000012811	-	99	79.803	ENSPPAG00000036935	TSEN34	65	79.803	Pan_paniscus
ENSCAPG00000012811	-	99	81.773	ENSPPRG00000011779	TSEN34	65	81.773	Panthera_pardus
ENSCAPG00000012811	-	99	80.296	ENSPTRG00000044768	-	65	80.296	Pan_troglodytes
ENSCAPG00000012811	-	99	80.296	ENSPTRG00000011448	TSEN34	65	80.296	Pan_troglodytes
ENSCAPG00000012811	-	99	81.281	ENSPANG00000012101	TSEN34	65	81.281	Papio_anubis
ENSCAPG00000012811	-	99	79.412	ENSPEMG00000014535	Tsen34	66	79.412	Peromyscus_maniculatus_bairdii
ENSCAPG00000012811	-	67	55.224	ENSPFOG00000008679	tsen34	53	51.634	Poecilia_formosa
ENSCAPG00000012811	-	67	55.970	ENSPLAG00000017309	tsen34	53	52.288	Poecilia_latipinna
ENSCAPG00000012811	-	67	55.224	ENSPMEG00000005235	tsen34	53	51.634	Poecilia_mexicana
ENSCAPG00000012811	-	99	81.281	ENSPPYG00000010376	TSEN34	63	81.281	Pongo_abelii
ENSCAPG00000012811	-	99	80.296	ENSPCAG00000012359	TSEN34	66	80.788	Procavia_capensis
ENSCAPG00000012811	-	99	81.773	ENSPCOG00000013843	TSEN34	65	81.773	Propithecus_coquereli
ENSCAPG00000012811	-	99	77.833	ENSPVAG00000015570	TSEN34	65	77.833	Pteropus_vampyrus
ENSCAPG00000012811	-	99	77.143	ENSRNOG00000059572	Tsen34l1	66	77.143	Rattus_norvegicus
ENSCAPG00000012811	-	99	77.143	ENSRNOG00000055179	Tsen34	66	77.143	Rattus_norvegicus
ENSCAPG00000012811	-	99	80.296	ENSRBIG00000034430	TSEN34	65	80.296	Rhinopithecus_bieti
ENSCAPG00000012811	-	99	80.788	ENSRROG00000024217	TSEN34	65	80.788	Rhinopithecus_roxellana
ENSCAPG00000012811	-	94	80.105	ENSSBOG00000016017	TSEN34	62	80.000	Saimiri_boliviensis_boliviensis
ENSCAPG00000012811	-	71	72.857	ENSSHAG00000009295	-	93	59.296	Sarcophilus_harrisii
ENSCAPG00000012811	-	67	48.872	ENSSFOG00015017579	tsen34	58	47.826	Scleropages_formosus
ENSCAPG00000012811	-	68	53.901	ENSSMAG00000005214	tsen34	50	53.901	Scophthalmus_maximus
ENSCAPG00000012811	-	99	43.564	ENSSDUG00000005391	tsen34	63	43.564	Seriola_dumerili
ENSCAPG00000012811	-	90	64.737	ENSSARG00000005857	TSEN34	51	64.737	Sorex_araneus
ENSCAPG00000012811	-	67	53.731	ENSSPAG00000010512	tsen34	50	52.482	Stegastes_partitus
ENSCAPG00000012811	-	99	78.431	ENSSSCG00000003268	TSEN34	66	78.922	Sus_scrofa
ENSCAPG00000012811	-	73	45.963	ENSTRUG00000000787	tsen34	56	45.963	Takifugu_rubripes
ENSCAPG00000012811	-	70	49.324	ENSTNIG00000001937	-	54	49.091	Tetraodon_nigroviridis
ENSCAPG00000012811	-	99	81.281	ENSTTRG00000006571	TSEN34	65	81.281	Tursiops_truncatus
ENSCAPG00000012811	-	99	79.803	ENSUAMG00000008701	TSEN34	65	79.803	Ursus_americanus
ENSCAPG00000012811	-	99	79.803	ENSVVUG00000008211	TSEN34	65	79.803	Vulpes_vulpes
ENSCAPG00000012811	-	98	43.367	ENSXETG00000004597	tsen34	64	42.929	Xenopus_tropicalis