EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000012908 (Gene tree)
Gene ID: -
Gene Symbol: RNF17
Alias: FLJ11045|Mmip-2|SPATA23|TDRD4
Full Name: ring finger protein 17
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 147131 bases
Position: chrAVPZ01000667.1:22874809-23021939
Accession: 10060
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000011958	TUDOR	PF00567.24	6.2e-49	1	3
ENSCAPP00000011958	TUDOR	PF00567.24	6.2e-49	2	3
ENSCAPP00000011958	TUDOR	PF00567.24	6.2e-49	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000015707	RNF17-201	3600	-	ENSCAPP00000011958	1199 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000012908's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000012908's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000012908	RNF17	99	66.281	ENSG00000132972	RNF17	94	69.565	Homo_sapiens
ENSCAPG00000012908	RNF17	81	30.479	ENSAPOG00000017034	rnf17	71	30.605	Acanthochromis_polyacanthus
ENSCAPG00000012908	RNF17	99	67.907	ENSAMEG00000017340	RNF17	83	67.907	Ailuropoda_melanoleuca
ENSCAPG00000012908	RNF17	89	30.428	ENSAOCG00000018283	rnf17	74	30.456	Amphiprion_ocellaris
ENSCAPG00000012908	RNF17	81	30.899	ENSATEG00000002067	rnf17	74	30.899	Anabas_testudineus
ENSCAPG00000012908	RNF17	90	43.361	ENSAPLG00000003969	RNF17	84	43.361	Anas_platyrhynchos
ENSCAPG00000012908	RNF17	90	40.066	ENSACAG00000001418	RNF17	75	40.066	Anolis_carolinensis
ENSCAPG00000012908	RNF17	86	71.120	ENSANAG00000029969	RNF17	71	79.283	Aotus_nancymaae
ENSCAPG00000012908	RNF17	57	60.000	ENSBTAG00000000278	RNF17	100	60.000	Bos_taurus
ENSCAPG00000012908	RNF17	99	65.289	ENSCJAG00000018937	RNF17	100	58.502	Callithrix_jacchus
ENSCAPG00000012908	RNF17	96	67.604	ENSCAFG00000007418	RNF17	89	62.697	Canis_familiaris
ENSCAPG00000012908	RNF17	62	61.022	ENSCAFG00020002919	-	100	61.429	Canis_lupus_dingo
ENSCAPG00000012908	RNF17	90	66.255	ENSCHIG00000026716	RNF17	100	59.375	Capra_hircus
ENSCAPG00000012908	RNF17	99	63.854	ENSTSYG00000000365	RNF17	99	56.542	Carlito_syrichta
ENSCAPG00000012908	RNF17	99	65.207	ENSCCAG00000026725	RNF17	99	58.658	Cebus_capucinus
ENSCAPG00000012908	RNF17	99	65.785	ENSCATG00000040352	RNF17	100	59.380	Cercocebus_atys
ENSCAPG00000012908	RNF17	99	73.715	ENSCLAG00000004127	RNF17	83	73.715	Chinchilla_lanigera
ENSCAPG00000012908	RNF17	99	65.702	ENSCSAG00000018019	RNF17	83	65.702	Chlorocebus_sabaeus
ENSCAPG00000012908	RNF17	83	68.750	ENSCHOG00000013310	RNF17	66	67.347	Choloepus_hoffmanni
ENSCAPG00000012908	RNF17	99	49.589	ENSCPBG00000020920	RNF17	95	43.868	Chrysemys_picta_bellii
ENSCAPG00000012908	RNF17	99	65.343	ENSCANG00000032927	RNF17	99	59.006	Colobus_angolensis_palliatus
ENSCAPG00000012908	RNF17	99	66.805	ENSCGRG00001022658	Rnf17	82	66.805	Cricetulus_griseus_chok1gshd
ENSCAPG00000012908	RNF17	99	66.805	ENSCGRG00000009924	Rnf17	82	66.805	Cricetulus_griseus_crigri
ENSCAPG00000012908	RNF17	75	30.683	ENSCSEG00000008626	rnf17	71	30.683	Cynoglossus_semilaevis
ENSCAPG00000012908	RNF17	99	66.529	ENSDNOG00000006115	RNF17	82	66.529	Dasypus_novemcinctus
ENSCAPG00000012908	RNF17	59	61.821	ENSEASG00005001421	-	100	61.821	Equus_asinus_asinus
ENSCAPG00000012908	RNF17	99	68.983	ENSECAG00000017152	RNF17	81	68.983	Equus_caballus
ENSCAPG00000012908	RNF17	66	66.225	ENSEEUG00000000332	RNF17	57	66.225	Erinaceus_europaeus
ENSCAPG00000012908	RNF17	89	30.269	ENSELUG00000005626	rnf17	74	30.212	Esox_lucius
ENSCAPG00000012908	RNF17	99	68.709	ENSFCAG00000004914	RNF17	100	61.310	Felis_catus
ENSCAPG00000012908	RNF17	100	41.397	ENSFALG00000008766	RNF17	90	41.397	Ficedula_albicollis
ENSCAPG00000012908	RNF17	99	70.588	ENSFDAG00000017857	RNF17	82	70.588	Fukomys_damarensis
ENSCAPG00000012908	RNF17	91	49.262	ENSGAGG00000016999	RNF17	80	49.262	Gopherus_agassizii
ENSCAPG00000012908	RNF17	99	66.364	ENSGGOG00000014491	RNF17	100	59.535	Gorilla_gorilla
ENSCAPG00000012908	RNF17	99	71.831	ENSHGLG00000007270	RNF17	82	71.831	Heterocephalus_glaber_female
ENSCAPG00000012908	RNF17	99	71.914	ENSHGLG00100017393	RNF17	82	71.914	Heterocephalus_glaber_male
ENSCAPG00000012908	RNF17	99	65.199	ENSJJAG00000016584	Rnf17	82	65.199	Jaculus_jaculus
ENSCAPG00000012908	RNF17	60	33.042	ENSLBEG00000014910	rnf17	65	33.042	Labrus_bergylta
ENSCAPG00000012908	RNF17	70	44.912	ENSLACG00000000323	RNF17	79	44.912	Latimeria_chalumnae
ENSCAPG00000012908	RNF17	99	65.950	ENSMFAG00000032388	RNF17	100	59.535	Macaca_fascicularis
ENSCAPG00000012908	RNF17	99	66.033	ENSMMUG00000014610	RNF17	100	59.690	Macaca_mulatta
ENSCAPG00000012908	RNF17	99	65.868	ENSMNEG00000011234	RNF17	100	60.127	Macaca_nemestrina
ENSCAPG00000012908	RNF17	99	66.030	ENSMLEG00000030227	RNF17	83	66.030	Mandrillus_leucophaeus
ENSCAPG00000012908	RNF17	90	42.118	ENSMGAG00000015138	RNF17	96	42.118	Meleagris_gallopavo
ENSCAPG00000012908	RNF17	99	63.606	ENSMAUG00000004788	Rnf17	82	63.772	Mesocricetus_auratus
ENSCAPG00000012908	RNF17	99	68.377	ENSMICG00000010364	RNF17	100	61.059	Microcebus_murinus
ENSCAPG00000012908	RNF17	70	66.244	ENSMOCG00000011818	-	100	66.244	Microtus_ochrogaster
ENSCAPG00000012908	RNF17	100	57.756	ENSMODG00000007827	RNF17	81	57.756	Monodelphis_domestica
ENSCAPG00000012908	RNF17	81	31.466	ENSMALG00000016943	rnf17	72	31.466	Monopterus_albus
ENSCAPG00000012908	RNF17	99	66.915	MGP_CAROLIEiJ_G0019337	Rnf17	82	66.998	Mus_caroli
ENSCAPG00000012908	RNF17	99	66.722	ENSMUSG00000000365	Rnf17	82	66.722	Mus_musculus
ENSCAPG00000012908	RNF17	99	67.052	MGP_PahariEiJ_G0030355	Rnf17	82	67.052	Mus_pahari
ENSCAPG00000012908	RNF17	99	66.804	MGP_SPRETEiJ_G0020228	Rnf17	82	66.804	Mus_spretus
ENSCAPG00000012908	RNF17	99	68.631	ENSMPUG00000013305	RNF17	83	68.631	Mustela_putorius_furo
ENSCAPG00000012908	RNF17	99	68.156	ENSMLUG00000003903	RNF17	83	68.156	Myotis_lucifugus
ENSCAPG00000012908	RNF17	99	65.840	ENSNGAG00000013553	Rnf17	82	65.840	Nannospalax_galili
ENSCAPG00000012908	RNF17	89	30.874	ENSNBRG00000012006	rnf17	82	30.874	Neolamprologus_brichardi
ENSCAPG00000012908	RNF17	99	65.702	ENSNLEG00000013780	RNF17	100	59.098	Nomascus_leucogenys
ENSCAPG00000012908	RNF17	84	74.468	ENSOPRG00000016743	-	71	74.468	Ochotona_princeps
ENSCAPG00000012908	RNF17	59	60.932	ENSODEG00000005443	-	100	60.932	Octodon_degus
ENSCAPG00000012908	RNF17	64	30.366	ENSONIG00000015746	rnf17	98	30.366	Oreochromis_niloticus
ENSCAPG00000012908	RNF17	99	67.659	ENSOCUG00000007384	RNF17	82	67.659	Oryctolagus_cuniculus
ENSCAPG00000012908	RNF17	75	31.041	ENSORLG00000012818	rnf17	73	31.094	Oryzias_latipes
ENSCAPG00000012908	RNF17	75	31.256	ENSORLG00020009879	-	65	31.256	Oryzias_latipes_hni
ENSCAPG00000012908	RNF17	75	31.173	ENSORLG00015013027	-	65	31.173	Oryzias_latipes_hsok
ENSCAPG00000012908	RNF17	67	30.839	ENSOMEG00000009891	rnf17	82	30.839	Oryzias_melastigma
ENSCAPG00000012908	RNF17	99	66.584	ENSOGAG00000014803	RNF17	83	66.584	Otolemur_garnettii
ENSCAPG00000012908	RNF17	99	66.173	ENSOARG00000014641	RNF17	83	66.173	Ovis_aries
ENSCAPG00000012908	RNF17	99	61.233	ENSPPAG00000028779	RNF17	100	59.225	Pan_paniscus
ENSCAPG00000012908	RNF17	99	68.626	ENSPPRG00000009230	RNF17	100	61.310	Panthera_pardus
ENSCAPG00000012908	RNF17	99	68.709	ENSPTIG00000001738	RNF17	100	61.466	Panthera_tigris_altaica
ENSCAPG00000012908	RNF17	99	66.033	ENSPTRG00000005713	RNF17	100	59.070	Pan_troglodytes
ENSCAPG00000012908	RNF17	99	65.378	ENSPANG00000007640	RNF17	100	59.225	Papio_anubis
ENSCAPG00000012908	RNF17	89	30.711	ENSPKIG00000001648	rnf17	90	30.711	Paramormyrops_kingsleyae
ENSCAPG00000012908	RNF17	90	49.094	ENSPSIG00000011245	RNF17	100	49.176	Pelodiscus_sinensis
ENSCAPG00000012908	RNF17	100	67.163	ENSPEMG00000008693	Rnf17	85	67.163	Peromyscus_maniculatus_bairdii
ENSCAPG00000012908	RNF17	72	58.849	ENSPCIG00000009190	-	94	58.849	Phascolarctos_cinereus
ENSCAPG00000012908	RNF17	99	65.868	ENSPPYG00000005215	RNF17	83	65.868	Pongo_abelii
ENSCAPG00000012908	RNF17	66	84.211	ENSPCAG00000002665	RNF17	59	84.211	Procavia_capensis
ENSCAPG00000012908	RNF17	87	52.740	ENSPCOG00000020211	RNF17	76	67.010	Propithecus_coquereli
ENSCAPG00000012908	RNF17	94	77.320	ENSPVAG00000013021	RNF17	80	77.320	Pteropus_vampyrus
ENSCAPG00000012908	RNF17	99	65.840	ENSRNOG00000008059	Rnf17	82	65.840	Rattus_norvegicus
ENSCAPG00000012908	RNF17	99	64.508	ENSRBIG00000027010	RNF17	88	60.303	Rhinopithecus_bieti
ENSCAPG00000012908	RNF17	99	65.149	ENSRROG00000022801	RNF17	100	58.696	Rhinopithecus_roxellana
ENSCAPG00000012908	RNF17	99	65.124	ENSSBOG00000021661	RNF17	99	58.563	Saimiri_boliviensis_boliviensis
ENSCAPG00000012908	RNF17	99	57.603	ENSSHAG00000005609	RNF17	82	57.603	Sarcophilus_harrisii
ENSCAPG00000012908	RNF17	89	31.574	ENSSFOG00015023037	rnf17	89	31.574	Scleropages_formosus
ENSCAPG00000012908	RNF17	80	72.648	ENSSARG00000003016	RNF17	62	72.648	Sorex_araneus
ENSCAPG00000012908	RNF17	88	49.369	ENSSPUG00000008917	RNF17	81	48.862	Sphenodon_punctatus
ENSCAPG00000012908	RNF17	98	64.433	ENSSSCG00000009572	RNF17	82	64.221	Sus_scrofa
ENSCAPG00000012908	RNF17	56	49.636	ENSTGUG00000011267	-	100	49.636	Taeniopygia_guttata
ENSCAPG00000012908	RNF17	55	38.663	ENSTGUG00000011272	-	100	38.663	Taeniopygia_guttata
ENSCAPG00000012908	RNF17	85	62.441	ENSTBEG00000000282	RNF17	75	63.918	Tupaia_belangeri
ENSCAPG00000012908	RNF17	99	59.752	ENSTTRG00000012698	RNF17	83	59.752	Tursiops_truncatus
ENSCAPG00000012908	RNF17	63	61.981	ENSUMAG00000013953	-	100	61.905	Ursus_maritimus
ENSCAPG00000012908	RNF17	72	88.732	ENSVPAG00000011388	RNF17	62	88.732	Vicugna_pacos
ENSCAPG00000012908	RNF17	99	68.478	ENSVVUG00000006226	RNF17	84	68.382	Vulpes_vulpes
ENSCAPG00000012908	RNF17	85	33.874	ENSXETG00000034020	RNF17	100	33.706	Xenopus_tropicalis