EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAPG00000013001 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 6985 bases
Position: chrAVPZ01000389.1:15146148-15153132
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000012068	PAP_assoc	PF03828.19	1.6e-06	1	1
ENSCAPP00000012068	RRM_1	PF00076.22	3.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000015818	-	2070	-	ENSCAPP00000012068	690 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000013001's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000013001's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAPG00000013001	-	65	33.210	ENSCAPG00000008656	MTPAP	87	33.210

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000013001	-	99	80.925	ENSG00000149016	TUT1	100	81.944	Homo_sapiens
ENSCAPG00000013001	-	77	45.659	ENSAPOG00000016423	tut1	68	45.659	Acanthochromis_polyacanthus
ENSCAPG00000013001	-	99	79.855	ENSAMEG00000006723	-	79	80.145	Ailuropoda_melanoleuca
ENSCAPG00000013001	-	77	44.706	ENSACIG00000000948	tut1	72	44.706	Amphilophus_citrinellus
ENSCAPG00000013001	-	77	46.154	ENSAOCG00000021912	tut1	69	46.154	Amphiprion_ocellaris
ENSCAPG00000013001	-	77	46.154	ENSAPEG00000005144	tut1	70	45.833	Amphiprion_percula
ENSCAPG00000013001	-	72	47.980	ENSATEG00000014590	tut1	67	47.980	Anabas_testudineus
ENSCAPG00000013001	-	99	80.925	ENSANAG00000029063	-	79	80.925	Aotus_nancymaae
ENSCAPG00000013001	-	77	47.115	ENSACLG00000013406	tut1	68	47.115	Astatotilapia_calliptera
ENSCAPG00000013001	-	83	43.265	ENSAMXG00000042139	tut1	78	43.265	Astyanax_mexicanus
ENSCAPG00000013001	-	99	78.902	ENSBTAG00000011846	TUT1	79	79.480	Bos_taurus
ENSCAPG00000013001	-	99	80.697	ENSCJAG00000033294	-	91	80.556	Callithrix_jacchus
ENSCAPG00000013001	-	99	79.130	ENSCAFG00000015822	TUT1	78	79.420	Canis_familiaris
ENSCAPG00000013001	-	99	79.130	ENSCAFG00020013039	-	78	79.420	Canis_lupus_dingo
ENSCAPG00000013001	-	99	79.480	ENSCHIG00000006765	-	79	79.480	Capra_hircus
ENSCAPG00000013001	-	99	74.711	ENSTSYG00000000147	-	75	74.711	Carlito_syrichta
ENSCAPG00000013001	-	100	100.000	ENSCPOG00000014281	-	81	100.000	Cavia_porcellus
ENSCAPG00000013001	-	99	80.636	ENSCCAG00000018819	-	76	80.636	Cebus_capucinus
ENSCAPG00000013001	-	99	81.503	ENSCATG00000036770	-	75	81.503	Cercocebus_atys
ENSCAPG00000013001	-	100	89.565	ENSCLAG00000000215	-	81	89.565	Chinchilla_lanigera
ENSCAPG00000013001	-	91	80.442	ENSCSAG00000006566	-	80	80.442	Chlorocebus_sabaeus
ENSCAPG00000013001	-	67	70.196	ENSCHOG00000007746	-	50	70.196	Choloepus_hoffmanni
ENSCAPG00000013001	-	74	54.741	ENSCPBG00000017909	-	74	52.484	Chrysemys_picta_bellii
ENSCAPG00000013001	-	99	80.980	ENSCANG00000043244	-	76	80.980	Colobus_angolensis_palliatus
ENSCAPG00000013001	-	100	72.414	ENSCGRG00001017583	Tut1	80	72.414	Cricetulus_griseus_chok1gshd
ENSCAPG00000013001	-	100	72.414	ENSCGRG00000015008	Tut1	80	72.414	Cricetulus_griseus_crigri
ENSCAPG00000013001	-	77	47.115	ENSCSEG00000012807	tut1	68	47.115	Cynoglossus_semilaevis
ENSCAPG00000013001	-	76	46.569	ENSCVAG00000005396	tut1	70	46.569	Cyprinodon_variegatus
ENSCAPG00000013001	-	77	47.561	ENSDARG00000057321	tut1	69	47.561	Danio_rerio
ENSCAPG00000013001	-	99	79.624	ENSDNOG00000038908	-	79	79.913	Dasypus_novemcinctus
ENSCAPG00000013001	-	100	78.902	ENSDORG00000004018	Tut1	78	78.902	Dipodomys_ordii
ENSCAPG00000013001	-	82	43.357	ENSEBUG00000014170	tut1	61	43.357	Eptatretus_burgeri
ENSCAPG00000013001	-	99	80.636	ENSEASG00005007531	-	79	80.636	Equus_asinus_asinus
ENSCAPG00000013001	-	99	80.925	ENSECAG00000009471	-	77	80.925	Equus_caballus
ENSCAPG00000013001	-	99	75.581	ENSEEUG00000001238	-	79	75.581	Erinaceus_europaeus
ENSCAPG00000013001	-	82	42.419	ENSELUG00000011532	tut1	64	42.419	Esox_lucius
ENSCAPG00000013001	-	99	79.509	ENSFCAG00000008859	-	76	79.798	Felis_catus
ENSCAPG00000013001	-	99	81.277	ENSFDAG00000021131	-	87	81.277	Fukomys_damarensis
ENSCAPG00000013001	-	71	48.731	ENSFHEG00000006279	tut1	63	48.731	Fundulus_heteroclitus
ENSCAPG00000013001	-	77	46.108	ENSGMOG00000013378	tut1	73	46.108	Gadus_morhua
ENSCAPG00000013001	-	70	46.254	ENSGACG00000009956	tut1	64	46.254	Gasterosteus_aculeatus
ENSCAPG00000013001	-	88	46.840	ENSGAGG00000007912	-	74	46.840	Gopherus_agassizii
ENSCAPG00000013001	-	99	80.925	ENSGGOG00000013564	-	82	86.111	Gorilla_gorilla
ENSCAPG00000013001	-	77	46.795	ENSHBUG00000022855	tut1	68	46.795	Haplochromis_burtoni
ENSCAPG00000013001	-	100	85.507	ENSHGLG00000002742	-	81	85.507	Heterocephalus_glaber_female
ENSCAPG00000013001	-	100	85.507	ENSHGLG00100017588	-	81	85.507	Heterocephalus_glaber_male
ENSCAPG00000013001	-	87	38.961	ENSHCOG00000016358	tut1	68	38.961	Hippocampus_comes
ENSCAPG00000013001	-	77	46.835	ENSIPUG00000017671	tut1	70	46.835	Ictalurus_punctatus
ENSCAPG00000013001	-	99	79.913	ENSSTOG00000002859	-	79	79.798	Ictidomys_tridecemlineatus
ENSCAPG00000013001	-	99	77.569	ENSJJAG00000022329	Tut1	80	77.569	Jaculus_jaculus
ENSCAPG00000013001	-	87	40.484	ENSKMAG00000010023	tut1	68	40.484	Kryptolebias_marmoratus
ENSCAPG00000013001	-	71	43.770	ENSLBEG00000014969	tut1	64	43.770	Labrus_bergylta
ENSCAPG00000013001	-	82	43.463	ENSLACG00000011278	tut1	68	43.434	Latimeria_chalumnae
ENSCAPG00000013001	-	72	53.875	ENSLOCG00000013105	tut1	63	54.244	Lepisosteus_oculatus
ENSCAPG00000013001	-	99	79.480	ENSLAFG00000003340	-	79	79.365	Loxodonta_africana
ENSCAPG00000013001	-	99	81.358	ENSMFAG00000000912	-	75	81.358	Macaca_fascicularis
ENSCAPG00000013001	-	99	81.214	ENSMMUG00000006595	-	83	81.013	Macaca_mulatta
ENSCAPG00000013001	-	99	81.358	ENSMNEG00000029841	-	75	81.358	Macaca_nemestrina
ENSCAPG00000013001	-	99	81.647	ENSMLEG00000040498	-	75	81.647	Mandrillus_leucophaeus
ENSCAPG00000013001	-	72	49.281	ENSMAMG00000008173	tut1	65	49.281	Mastacembelus_armatus
ENSCAPG00000013001	-	77	44.223	ENSMZEG00005009777	tut1	72	44.223	Maylandia_zebra
ENSCAPG00000013001	-	83	82.353	ENSMAUG00000012453	Tut1	75	82.353	Mesocricetus_auratus
ENSCAPG00000013001	-	100	79.221	ENSMICG00000009841	-	76	79.221	Microcebus_murinus
ENSCAPG00000013001	-	99	73.410	ENSMOCG00000015834	Tut1	79	73.410	Microtus_ochrogaster
ENSCAPG00000013001	-	77	46.302	ENSMMOG00000002589	tut1	68	46.302	Mola_mola
ENSCAPG00000013001	-	94	71.558	ENSMODG00000007710	-	79	69.811	Monodelphis_domestica
ENSCAPG00000013001	-	77	46.006	ENSMALG00000003624	tut1	68	46.006	Monopterus_albus
ENSCAPG00000013001	-	99	71.533	MGP_CAROLIEiJ_G0022670	Tut1	79	71.971	Mus_caroli
ENSCAPG00000013001	-	99	71.657	ENSMUSG00000071645	Tut1	79	72.965	Mus_musculus
ENSCAPG00000013001	-	100	71.552	MGP_PahariEiJ_G0014164	Tut1	80	72.845	Mus_pahari
ENSCAPG00000013001	-	99	71.366	MGP_SPRETEiJ_G0023583	Tut1	79	72.674	Mus_spretus
ENSCAPG00000013001	-	99	79.450	ENSMPUG00000013938	-	79	79.740	Mustela_putorius_furo
ENSCAPG00000013001	-	99	67.294	ENSMLUG00000000349	-	78	67.294	Myotis_lucifugus
ENSCAPG00000013001	-	99	77.698	ENSNGAG00000002988	Tut1	80	77.698	Nannospalax_galili
ENSCAPG00000013001	-	77	47.115	ENSNBRG00000022055	tut1	68	47.115	Neolamprologus_brichardi
ENSCAPG00000013001	-	99	81.069	ENSNLEG00000003780	-	82	85.880	Nomascus_leucogenys
ENSCAPG00000013001	-	89	73.737	ENSMEUG00000012756	-	72	73.737	Notamacropus_eugenii
ENSCAPG00000013001	-	80	81.329	ENSOPRG00000011835	-	71	81.329	Ochotona_princeps
ENSCAPG00000013001	-	100	87.391	ENSODEG00000002204	-	82	87.391	Octodon_degus
ENSCAPG00000013001	-	77	44.490	ENSONIG00000019913	tut1	73	44.490	Oreochromis_niloticus
ENSCAPG00000013001	-	67	68.478	ENSOANG00000012458	-	91	69.481	Ornithorhynchus_anatinus
ENSCAPG00000013001	-	99	80.202	ENSOCUG00000017215	-	76	80.202	Oryctolagus_cuniculus
ENSCAPG00000013001	-	77	46.429	ENSORLG00000004342	tut1	74	43.099	Oryzias_latipes
ENSCAPG00000013001	-	77	46.104	ENSORLG00015018834	tut1	74	42.817	Oryzias_latipes_hsok
ENSCAPG00000013001	-	69	48.148	ENSOMEG00000005129	tut1	63	48.148	Oryzias_melastigma
ENSCAPG00000013001	-	100	78.963	ENSOGAG00000000828	-	80	78.788	Otolemur_garnettii
ENSCAPG00000013001	-	99	74.319	ENSOARG00000015269	-	78	75.827	Ovis_aries
ENSCAPG00000013001	-	99	81.503	ENSPPAG00000037200	-	82	86.343	Pan_paniscus
ENSCAPG00000013001	-	99	79.654	ENSPPRG00000000257	-	79	79.942	Panthera_pardus
ENSCAPG00000013001	-	99	79.798	ENSPTIG00000017573	-	76	80.087	Panthera_tigris_altaica
ENSCAPG00000013001	-	99	81.358	ENSPTRG00000003770	TUT1	82	86.111	Pan_troglodytes
ENSCAPG00000013001	-	100	77.489	ENSPANG00000010908	-	82	77.633	Papio_anubis
ENSCAPG00000013001	-	91	37.977	ENSPKIG00000022062	tut1	75	37.977	Paramormyrops_kingsleyae
ENSCAPG00000013001	-	86	49.500	ENSPSIG00000004972	-	68	49.500	Pelodiscus_sinensis
ENSCAPG00000013001	-	69	49.808	ENSPMGG00000004299	tut1	62	49.097	Periophthalmus_magnuspinnatus
ENSCAPG00000013001	-	100	73.707	ENSPEMG00000018332	Tut1	80	73.851	Peromyscus_maniculatus_bairdii
ENSCAPG00000013001	-	62	50.186	ENSPMAG00000005825	tut1	62	50.186	Petromyzon_marinus
ENSCAPG00000013001	-	96	69.715	ENSPCIG00000017805	-	78	70.165	Phascolarctos_cinereus
ENSCAPG00000013001	-	71	47.573	ENSPFOG00000016195	tut1	64	47.573	Poecilia_formosa
ENSCAPG00000013001	-	71	47.573	ENSPLAG00000022064	tut1	64	47.573	Poecilia_latipinna
ENSCAPG00000013001	-	71	47.896	ENSPMEG00000019175	tut1	65	47.896	Poecilia_mexicana
ENSCAPG00000013001	-	78	47.208	ENSPREG00000020464	tut1	73	47.208	Poecilia_reticulata
ENSCAPG00000013001	-	99	81.069	ENSPPYG00000003162	-	79	81.069	Pongo_abelii
ENSCAPG00000013001	-	99	79.100	ENSPCAG00000002956	-	81	79.100	Procavia_capensis
ENSCAPG00000013001	-	100	76.781	ENSPCOG00000017464	-	77	76.781	Propithecus_coquereli
ENSCAPG00000013001	-	81	78.879	ENSPVAG00000003444	-	64	78.879	Pteropus_vampyrus
ENSCAPG00000013001	-	77	46.154	ENSPNYG00000018764	tut1	68	46.154	Pundamilia_nyererei
ENSCAPG00000013001	-	77	47.951	ENSPNAG00000011889	tut1	70	47.951	Pygocentrus_nattereri
ENSCAPG00000013001	-	100	73.563	ENSRNOG00000020047	Tut1	80	73.563	Rattus_norvegicus
ENSCAPG00000013001	-	99	80.980	ENSRBIG00000021240	-	83	86.343	Rhinopithecus_bieti
ENSCAPG00000013001	-	99	80.980	ENSRROG00000043315	-	83	86.343	Rhinopithecus_roxellana
ENSCAPG00000013001	-	99	80.636	ENSSBOG00000003827	-	79	80.636	Saimiri_boliviensis_boliviensis
ENSCAPG00000013001	-	99	69.814	ENSSHAG00000003368	-	82	69.814	Sarcophilus_harrisii
ENSCAPG00000013001	-	90	38.955	ENSSFOG00015005639	tut1	77	47.410	Scleropages_formosus
ENSCAPG00000013001	-	77	46.795	ENSSMAG00000011449	tut1	69	46.795	Scophthalmus_maximus
ENSCAPG00000013001	-	70	45.503	ENSSDUG00000003613	tut1	70	44.872	Seriola_dumerili
ENSCAPG00000013001	-	70	45.503	ENSSLDG00000022487	tut1	68	44.551	Seriola_lalandi_dorsalis
ENSCAPG00000013001	-	74	55.312	ENSSPUG00000008143	-	64	55.312	Sphenodon_punctatus
ENSCAPG00000013001	-	71	47.716	ENSSPAG00000023390	tut1	63	47.716	Stegastes_partitus
ENSCAPG00000013001	-	85	79.561	ENSSSCG00000013063	-	78	80.180	Sus_scrofa
ENSCAPG00000013001	-	77	45.161	ENSTRUG00000016451	tut1	73	45.161	Takifugu_rubripes
ENSCAPG00000013001	-	88	42.904	ENSTNIG00000012852	tut1	95	42.904	Tetraodon_nigroviridis
ENSCAPG00000013001	-	99	79.420	ENSTTRG00000002460	-	79	79.420	Tursiops_truncatus
ENSCAPG00000013001	-	99	79.565	ENSUAMG00000027237	-	79	79.855	Ursus_americanus
ENSCAPG00000013001	-	99	79.565	ENSUMAG00000012710	-	79	79.855	Ursus_maritimus
ENSCAPG00000013001	-	93	80.000	ENSVPAG00000005413	-	96	80.000	Vicugna_pacos
ENSCAPG00000013001	-	99	79.275	ENSVVUG00000029882	-	78	79.565	Vulpes_vulpes
ENSCAPG00000013001	-	79	47.872	ENSXETG00000005640	tut1	73	40.429	Xenopus_tropicalis
ENSCAPG00000013001	-	62	41.244	ENSXCOG00000017824	tut1	79	41.244	Xiphophorus_couchianus
ENSCAPG00000013001	-	79	46.701	ENSXMAG00000027272	tut1	74	46.701	Xiphophorus_maculatus