EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCAPG00000013059 (Gene tree)
Gene ID
-
Gene Symbol
LSM14B
Alias
C20orf40|FAM61B|FLJ25473|FT005|LSM13|RAP55B|bA11M20.3
Full Name
LSM family member 14B
Gene Type
protein_coding
Species
Cavia_aperea
Status
putative
Strand
Minus strand
Length
7485 bases
Position
chrAVPZ01000022.1:1897038-1904522
Accession
15887
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCAPP00000012150FDFPF09532.101.9e-2311
ENSCAPP00000012147FDFPF09532.102.4e-2311
ENSCAPP00000012147LSM14PF12701.71.1e-1111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCAPT00000015897LSM14B-2011032-ENSCAPP00000012147343 (aa)--
ENSCAPT00000015900LSM14B-202918-ENSCAPP00000012150305 (aa)--
Gene Model
Click here to download ENSCAPG00000013059's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000013059's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCAPG00000013059LSM14B9043.068ENSCAPG00000017514LSM14A8442.857
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCAPG00000013059LSM14B10094.752ENSG00000149657LSM14B10093.145Homo_sapiens
ENSCAPG00000013059LSM14B8952.174ENSAPOG00000001780lsm14b8152.599Acanthochromis_polyacanthus
ENSCAPG00000013059LSM14B10092.459ENSAMEG00000013430LSM14B9083.770Ailuropoda_melanoleuca
ENSCAPG00000013059LSM14B8948.882ENSACIG00000012266lsm14b8048.160Amphilophus_citrinellus
ENSCAPG00000013059LSM14B6942.500ENSACIG00000003147LSM14B8842.194Amphilophus_citrinellus
ENSCAPG00000013059LSM14B10046.910ENSAOCG00000006667LSM14B8247.531Amphiprion_ocellaris
ENSCAPG00000013059LSM14B8953.125ENSAOCG00000012380lsm14b8153.538Amphiprion_ocellaris
ENSCAPG00000013059LSM14B8948.882ENSAPEG00000023633lsm14b8046.177Amphiprion_percula
ENSCAPG00000013059LSM14B9740.667ENSATEG00000015895LSM14B8941.497Anabas_testudineus
ENSCAPG00000013059LSM14B8950.000ENSATEG00000016603lsm14b8150.467Anabas_testudineus
ENSCAPG00000013059LSM14B10082.085ENSAPLG00000013203LSM14B9875.781Anas_platyrhynchos
ENSCAPG00000013059LSM14B10079.480ENSACAG00000016195LSM14B8979.480Anolis_carolinensis
ENSCAPG00000013059LSM14B10092.711ENSANAG00000037915LSM14B8992.711Aotus_nancymaae
ENSCAPG00000013059LSM14B8138.189ENSACLG00000027552-7137.339Astatotilapia_calliptera
ENSCAPG00000013059LSM14B5349.398ENSACLG00000019624-7839.916Astatotilapia_calliptera
ENSCAPG00000013059LSM14B5346.988ENSACLG00000011955-7738.235Astatotilapia_calliptera
ENSCAPG00000013059LSM14B8948.598ENSACLG00000019663lsm14b8151.692Astatotilapia_calliptera
ENSCAPG00000013059LSM14B8957.704ENSAMXG00000002865lsm14b9058.333Astyanax_mexicanus
ENSCAPG00000013059LSM14B10089.508ENSBTAG00000021558LSM14B9081.152Bos_taurus
ENSCAPG00000013059LSM14B10093.294ENSCJAG00000014434LSM14B8993.294Callithrix_jacchus
ENSCAPG00000013059LSM14B10091.148ENSCAFG00000012518LSM14B9882.723Canis_familiaris
ENSCAPG00000013059LSM14B10092.128ENSCAFG00020022150LSM14B8992.128Canis_lupus_dingo
ENSCAPG00000013059LSM14B10069.096ENSCHIG00000022681-9069.096Capra_hircus
ENSCAPG00000013059LSM14B10092.128ENSCHIG00000010284-8992.128Capra_hircus
ENSCAPG00000013059LSM14B9992.982ENSTSYG00000031914LSM14B8992.982Carlito_syrichta
ENSCAPG00000013059LSM14B10099.672ENSCPOG00000038080LSM14B10099.708Cavia_porcellus
ENSCAPG00000013059LSM14B9976.547ENSCCAG00000024900-9976.299Cebus_capucinus
ENSCAPG00000013059LSM14B10093.586ENSCCAG00000021267LSM14B8993.586Cebus_capucinus
ENSCAPG00000013059LSM14B10095.044ENSCATG00000036006LSM14B8995.044Cercocebus_atys
ENSCAPG00000013059LSM14B10096.721ENSCLAG00000003186LSM14B10097.076Chinchilla_lanigera
ENSCAPG00000013059LSM14B10093.443ENSCSAG00000015729LSM14B9085.340Chlorocebus_sabaeus
ENSCAPG00000013059LSM14B9962.338ENSCHOG00000006997-10062.662Choloepus_hoffmanni
ENSCAPG00000013059LSM14B10081.373ENSCPBG00000027065LSM14B9175.457Chrysemys_picta_bellii
ENSCAPG00000013059LSM14B9994.152ENSCANG00000036986LSM14B10094.152Colobus_angolensis_palliatus
ENSCAPG00000013059LSM14B10093.586ENSCGRG00001018399Lsm14b10092.787Cricetulus_griseus_chok1gshd
ENSCAPG00000013059LSM14B9892.617ENSCGRG00000006111-10092.617Cricetulus_griseus_crigri
ENSCAPG00000013059LSM14B8082.305ENSCGRG00000002484-10080.247Cricetulus_griseus_crigri
ENSCAPG00000013059LSM14B9048.589ENSCSEG00000004722lsm14b8149.226Cynoglossus_semilaevis
ENSCAPG00000013059LSM14B9645.352ENSCSEG00000020669LSM14B8245.536Cynoglossus_semilaevis
ENSCAPG00000013059LSM14B9532.203ENSCVAG00000012433-8836.402Cyprinodon_variegatus
ENSCAPG00000013059LSM14B10052.394ENSDARG00000025386lsm14b8952.394Danio_rerio
ENSCAPG00000013059LSM14B10088.197ENSDNOG00000025246LSM14B10088.197Dasypus_novemcinctus
ENSCAPG00000013059LSM14B10091.545ENSDORG00000016683Lsm14b10090.492Dipodomys_ordii
ENSCAPG00000013059LSM14B9973.977ENSETEG00000001869-8972.515Echinops_telfairi
ENSCAPG00000013059LSM14B8170.968ENSETEG00000011188-10084.848Echinops_telfairi
ENSCAPG00000013059LSM14B10091.475ENSEASG00005023218LSM14B10091.475Equus_asinus_asinus
ENSCAPG00000013059LSM14B10092.711ENSECAG00000010659LSM14B8992.711Equus_caballus
ENSCAPG00000013059LSM14B8374.737ENSEEUG00000007331LSM14B10074.737Erinaceus_europaeus
ENSCAPG00000013059LSM14B10051.420ENSELUG00000016299LSM14B8951.420Esox_lucius
ENSCAPG00000013059LSM14B9756.342ENSELUG00000005780lsm14b8256.740Esox_lucius
ENSCAPG00000013059LSM14B10092.420ENSFCAG00000003248LSM14B8992.420Felis_catus
ENSCAPG00000013059LSM14B10083.117ENSFALG00000010618LSM14B9976.623Ficedula_albicollis
ENSCAPG00000013059LSM14B10095.738ENSFDAG00000002214LSM14B10096.199Fukomys_damarensis
ENSCAPG00000013059LSM14B10047.175ENSFHEG00000006237lsm14b8147.130Fundulus_heteroclitus
ENSCAPG00000013059LSM14B7140.221ENSFHEG00000003362LSM14B6643.130Fundulus_heteroclitus
ENSCAPG00000013059LSM14B10048.837ENSGMOG00000017115lsm14b7848.562Gadus_morhua
ENSCAPG00000013059LSM14B10083.668ENSGALG00000005125LSM14B9084.814Gallus_gallus
ENSCAPG00000013059LSM14B8943.574ENSGAFG00000020318lsm14b8142.901Gambusia_affinis
ENSCAPG00000013059LSM14B9634.812ENSGAFG00000013723LSM14B8739.574Gambusia_affinis
ENSCAPG00000013059LSM14B9151.899ENSGACG00000009973lsm14b8151.899Gasterosteus_aculeatus
ENSCAPG00000013059LSM14B9371.479ENSGAGG00000004106LSM14B9480.816Gopherus_agassizii
ENSCAPG00000013059LSM14B10094.461ENSGGOG00000005630LSM14B10093.115Gorilla_gorilla
ENSCAPG00000013059LSM14B10095.918ENSHGLG00000015055LSM14B10095.410Heterocephalus_glaber_female
ENSCAPG00000013059LSM14B9995.364ENSHGLG00100015273LSM14B10095.364Heterocephalus_glaber_male
ENSCAPG00000013059LSM14B9547.536ENSHCOG00000018747LSM14B8248.297Hippocampus_comes
ENSCAPG00000013059LSM14B8837.175ENSHCOG00000004867lsm14b8643.404Hippocampus_comes
ENSCAPG00000013059LSM14B8956.592ENSIPUG00000014946lsm14b7756.962Ictalurus_punctatus
ENSCAPG00000013059LSM14B10096.066ENSSTOG00000020482LSM14B10096.491Ictidomys_tridecemlineatus
ENSCAPG00000013059LSM14B10093.586ENSJJAG00000012728Lsm14b10092.787Jaculus_jaculus
ENSCAPG00000013059LSM14B8950.311ENSKMAG00000017524lsm14b8150.765Kryptolebias_marmoratus
ENSCAPG00000013059LSM14B6543.333ENSKMAG00000012834-8843.541Kryptolebias_marmoratus
ENSCAPG00000013059LSM14B7840.602ENSLBEG00000007951LSM14B8640.598Labrus_bergylta
ENSCAPG00000013059LSM14B10067.638ENSLACG00000003849LSM14B9065.803Latimeria_chalumnae
ENSCAPG00000013059LSM14B10060.458ENSLOCG00000003746lsm14b9660.172Lepisosteus_oculatus
ENSCAPG00000013059LSM14B10089.796ENSLAFG00000007492LSM14B9989.796Loxodonta_africana
ENSCAPG00000013059LSM14B10095.044ENSMFAG00000041479LSM14B8995.044Macaca_fascicularis
ENSCAPG00000013059LSM14B10095.044ENSMMUG00000014084LSM14B8995.044Macaca_mulatta
ENSCAPG00000013059LSM14B10095.044ENSMNEG00000045573LSM14B8995.044Macaca_nemestrina
ENSCAPG00000013059LSM14B9995.029ENSMLEG00000040895LSM14B10095.029Mandrillus_leucophaeus
ENSCAPG00000013059LSM14B10047.578ENSMAMG00000024124LSM14B8147.962Mastacembelus_armatus
ENSCAPG00000013059LSM14B8949.536ENSMAMG00000020539lsm14b8150.915Mastacembelus_armatus
ENSCAPG00000013059LSM14B8947.975ENSMZEG00005000987lsm14b8151.077Maylandia_zebra
ENSCAPG00000013059LSM14B9245.455ENSMZEG00005026001LSM14B8546.567Maylandia_zebra
ENSCAPG00000013059LSM14B10081.322ENSMGAG00000005300LSM14B9882.471Meleagris_gallopavo
ENSCAPG00000013059LSM14B10093.294ENSMAUG00000020700Lsm14b10092.459Mesocricetus_auratus
ENSCAPG00000013059LSM14B10095.335ENSMICG00000014675LSM14B8995.335Microcebus_murinus
ENSCAPG00000013059LSM14B9079.273ENSMOCG00000005119-9379.121Microtus_ochrogaster
ENSCAPG00000013059LSM14B10093.294ENSMOCG00000020600Lsm14b10092.459Microtus_ochrogaster
ENSCAPG00000013059LSM14B8950.000ENSMMOG00000020042lsm14b8450.311Mola_mola
ENSCAPG00000013059LSM14B9147.436ENSMMOG00000017321LSM14B8047.452Mola_mola
ENSCAPG00000013059LSM14B10087.213ENSMODG00000016690LSM14B10087.213Monodelphis_domestica
ENSCAPG00000013059LSM14B9450.154ENSMALG00000004783lsm14b8148.718Monopterus_albus
ENSCAPG00000013059LSM14B9247.095ENSMALG00000022251LSM14B8142.773Monopterus_albus
ENSCAPG00000013059LSM14B10092.711MGP_CAROLIEiJ_G0024770Lsm14b8992.711Mus_caroli
ENSCAPG00000013059LSM14B10093.003ENSMUSG00000039108Lsm14b10091.803Mus_musculus
ENSCAPG00000013059LSM14B10093.003MGP_PahariEiJ_G0026214Lsm14b8993.003Mus_pahari
ENSCAPG00000013059LSM14B10093.003MGP_SPRETEiJ_G0025693Lsm14b8993.003Mus_spretus
ENSCAPG00000013059LSM14B10090.820ENSMPUG00000007584LSM14B9581.937Mustela_putorius_furo
ENSCAPG00000013059LSM14B10090.698ENSMLUG00000000304LSM14B8990.698Myotis_lucifugus
ENSCAPG00000013059LSM14B7589.610ENSNGAG00000016550Lsm14b10089.610Nannospalax_galili
ENSCAPG00000013059LSM14B9994.737ENSNLEG00000015757LSM14B10094.737Nomascus_leucogenys
ENSCAPG00000013059LSM14B7497.000ENSMEUG00000008267-6597.000Notamacropus_eugenii
ENSCAPG00000013059LSM14B5695.000ENSOPRG00000000447-5995.000Ochotona_princeps
ENSCAPG00000013059LSM14B10096.793ENSODEG00000004099LSM14B10096.393Octodon_degus
ENSCAPG00000013059LSM14B8952.025ENSONIG00000020318lsm14b8251.952Oreochromis_niloticus
ENSCAPG00000013059LSM14B6981.780ENSOANG00000003370LSM14B8681.369Ornithorhynchus_anatinus
ENSCAPG00000013059LSM14B10090.379ENSOCUG00000006279LSM14B9990.379Oryctolagus_cuniculus
ENSCAPG00000013059LSM14B9242.424ENSORLG00000028353LSM14B8141.796Oryzias_latipes
ENSCAPG00000013059LSM14B8947.950ENSORLG00000013525lsm14b8150.311Oryzias_latipes
ENSCAPG00000013059LSM14B9132.384ENSORLG00020018191-8534.363Oryzias_latipes_hni
ENSCAPG00000013059LSM14B8947.950ENSORLG00020020553lsm14b8150.311Oryzias_latipes_hni
ENSCAPG00000013059LSM14B8947.950ENSORLG00015016862lsm14b8150.311Oryzias_latipes_hsok
ENSCAPG00000013059LSM14B9242.470ENSORLG00015013157LSM14B8141.846Oryzias_latipes_hsok
ENSCAPG00000013059LSM14B7238.057ENSOMEG00000000171-9738.697Oryzias_melastigma
ENSCAPG00000013059LSM14B8947.319ENSOMEG00000023917lsm14b8049.689Oryzias_melastigma
ENSCAPG00000013059LSM14B10092.787ENSOGAG00000003915LSM14B9084.555Otolemur_garnettii
ENSCAPG00000013059LSM14B10091.148ENSOARG00000014706LSM14B9882.461Ovis_aries
ENSCAPG00000013059LSM14B10094.461ENSPPAG00000035799LSM14B9494.461Pan_paniscus
ENSCAPG00000013059LSM14B10092.128ENSPPRG00000009197LSM14B8992.128Panthera_pardus
ENSCAPG00000013059LSM14B9790.541ENSPTIG00000021518LSM14B10090.541Panthera_tigris_altaica
ENSCAPG00000013059LSM14B10094.752ENSPTRG00000013696LSM14B8994.752Pan_troglodytes
ENSCAPG00000013059LSM14B10095.335ENSPANG00000011747LSM14B8995.335Papio_anubis
ENSCAPG00000013059LSM14B10058.430ENSPKIG00000003275lsm14b8159.615Paramormyrops_kingsleyae
ENSCAPG00000013059LSM14B10082.849ENSPSIG00000014762LSM14B9982.849Pelodiscus_sinensis
ENSCAPG00000013059LSM14B10093.586ENSPEMG00000017688Lsm14b10092.459Peromyscus_maniculatus_bairdii
ENSCAPG00000013059LSM14B10088.047ENSPCIG00000013405LSM14B8988.047Phascolarctos_cinereus
ENSCAPG00000013059LSM14B10046.761ENSPFOG00000005631lsm14b8147.059Poecilia_formosa
ENSCAPG00000013059LSM14B10046.742ENSPLAG00000002449lsm14b8147.040Poecilia_latipinna
ENSCAPG00000013059LSM14B9044.688ENSPLAG00000005793LSM14B8145.342Poecilia_latipinna
ENSCAPG00000013059LSM14B8944.051ENSPMEG00000022953LSM14B8145.370Poecilia_mexicana
ENSCAPG00000013059LSM14B9146.417ENSPMEG00000000745lsm14b8146.417Poecilia_mexicana
ENSCAPG00000013059LSM14B9037.319ENSPREG00000007828LSM14B8739.044Poecilia_reticulata
ENSCAPG00000013059LSM14B10076.945ENSPPYG00000011194LSM14B8972.905Pongo_abelii
ENSCAPG00000013059LSM14B10095.044ENSPCOG00000013625LSM14B8995.044Propithecus_coquereli
ENSCAPG00000013059LSM14B10070.164ENSPVAG00000017918LSM14B10073.482Pteropus_vampyrus
ENSCAPG00000013059LSM14B10057.670ENSPNAG00000012777lsm14b9057.386Pygocentrus_nattereri
ENSCAPG00000013059LSM14B10091.475ENSRNOG00000054557Lsm14b9082.984Rattus_norvegicus
ENSCAPG00000013059LSM14B10093.878ENSRBIG00000033461LSM14B9993.878Rhinopithecus_bieti
ENSCAPG00000013059LSM14B10094.461ENSRROG00000042949LSM14B10092.787Rhinopithecus_roxellana
ENSCAPG00000013059LSM14B9992.982ENSSBOG00000032820LSM14B10092.982Saimiri_boliviensis_boliviensis
ENSCAPG00000013059LSM14B10088.338ENSSHAG00000015528LSM14B10086.557Sarcophilus_harrisii
ENSCAPG00000013059LSM14B8957.778ENSSFOG00015004627lsm14b8159.502Scleropages_formosus
ENSCAPG00000013059LSM14B9751.014ENSSMAG00000000135LSM14B8150.920Scophthalmus_maximus
ENSCAPG00000013059LSM14B8948.765ENSSMAG00000012725lsm14b8149.240Scophthalmus_maximus
ENSCAPG00000013059LSM14B8950.309ENSSDUG00000020977lsm14b8151.368Seriola_dumerili
ENSCAPG00000013059LSM14B9250.459ENSSDUG00000022770LSM14B8151.534Seriola_dumerili
ENSCAPG00000013059LSM14B9038.028ENSSLDG00000011354-8944.186Seriola_lalandi_dorsalis
ENSCAPG00000013059LSM14B6783.092ENSSARG00000007749-10083.092Sorex_araneus
ENSCAPG00000013059LSM14B10080.844ENSSPUG00000014360LSM14B9175.521Sphenodon_punctatus
ENSCAPG00000013059LSM14B9537.329ENSSPAG00000018854-8839.271Stegastes_partitus
ENSCAPG00000013059LSM14B8952.273ENSSPAG00000020915lsm14b7953.035Stegastes_partitus
ENSCAPG00000013059LSM14B10091.254ENSSSCG00000026052LSM14B10090.492Sus_scrofa
ENSCAPG00000013059LSM14B10084.682ENSTGUG00000007884LSM14B9984.682Taeniopygia_guttata
ENSCAPG00000013059LSM14B10047.632ENSTRUG00000011354lsm14b8148.624Takifugu_rubripes
ENSCAPG00000013059LSM14B9247.112ENSTRUG00000001529LSM14B8146.933Takifugu_rubripes
ENSCAPG00000013059LSM14B9152.648ENSTNIG00000002445lsm14b8152.648Tetraodon_nigroviridis
ENSCAPG00000013059LSM14B7195.238ENSTTRG00000011043LSM14B7569.024Tursiops_truncatus
ENSCAPG00000013059LSM14B10093.294ENSUAMG00000025298LSM14B9093.294Ursus_americanus
ENSCAPG00000013059LSM14B10093.294ENSUMAG00000000480LSM14B9093.294Ursus_maritimus
ENSCAPG00000013059LSM14B10091.837ENSVVUG00000015920LSM14B10090.820Vulpes_vulpes
ENSCAPG00000013059LSM14B8373.958ENSXETG00000001997lsm14b8875.000Xenopus_tropicalis
ENSCAPG00000013059LSM14B8945.426ENSXMAG00000010013lsm14b8145.963Xiphophorus_maculatus

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