EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCAPG00000013118 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Cavia_aperea
Status
putative
Strand
Plus strand
Length
12628 bases
Position
chrAVPZ01000085.1:1138921-1151548
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCAPP00000012214zf-C2H2PF00096.264.8e-69113
ENSCAPP00000012214zf-C2H2PF00096.264.8e-69213
ENSCAPP00000012214zf-C2H2PF00096.264.8e-69313
ENSCAPP00000012214zf-C2H2PF00096.264.8e-69413
ENSCAPP00000012214zf-C2H2PF00096.264.8e-69513
ENSCAPP00000012214zf-C2H2PF00096.264.8e-69613
ENSCAPP00000012214zf-C2H2PF00096.264.8e-69713
ENSCAPP00000012214zf-C2H2PF00096.264.8e-69813
ENSCAPP00000012214zf-C2H2PF00096.264.8e-69913
ENSCAPP00000012214zf-C2H2PF00096.264.8e-691013
ENSCAPP00000012214zf-C2H2PF00096.264.8e-691113
ENSCAPP00000012214zf-C2H2PF00096.264.8e-691213
ENSCAPP00000012214zf-C2H2PF00096.264.8e-691313
ENSCAPP00000012221zf-C2H2PF00096.264.8e-69113
ENSCAPP00000012221zf-C2H2PF00096.264.8e-69213
ENSCAPP00000012221zf-C2H2PF00096.264.8e-69313
ENSCAPP00000012221zf-C2H2PF00096.264.8e-69413
ENSCAPP00000012221zf-C2H2PF00096.264.8e-69513
ENSCAPP00000012221zf-C2H2PF00096.264.8e-69613
ENSCAPP00000012221zf-C2H2PF00096.264.8e-69713
ENSCAPP00000012221zf-C2H2PF00096.264.8e-69813
ENSCAPP00000012221zf-C2H2PF00096.264.8e-69913
ENSCAPP00000012221zf-C2H2PF00096.264.8e-691013
ENSCAPP00000012221zf-C2H2PF00096.264.8e-691113
ENSCAPP00000012221zf-C2H2PF00096.264.8e-691213
ENSCAPP00000012221zf-C2H2PF00096.264.8e-691313
ENSCAPP00000012232zf-C2H2PF00096.264.8e-69113
ENSCAPP00000012232zf-C2H2PF00096.264.8e-69213
ENSCAPP00000012232zf-C2H2PF00096.264.8e-69313
ENSCAPP00000012232zf-C2H2PF00096.264.8e-69413
ENSCAPP00000012232zf-C2H2PF00096.264.8e-69513
ENSCAPP00000012232zf-C2H2PF00096.264.8e-69613
ENSCAPP00000012232zf-C2H2PF00096.264.8e-69713
ENSCAPP00000012232zf-C2H2PF00096.264.8e-69813
ENSCAPP00000012232zf-C2H2PF00096.264.8e-69913
ENSCAPP00000012232zf-C2H2PF00096.264.8e-691013
ENSCAPP00000012232zf-C2H2PF00096.264.8e-691113
ENSCAPP00000012232zf-C2H2PF00096.264.8e-691213
ENSCAPP00000012232zf-C2H2PF00096.264.8e-691313
ENSCAPP00000012225zf-C2H2PF00096.269.1e-69113
ENSCAPP00000012225zf-C2H2PF00096.269.1e-69213
ENSCAPP00000012225zf-C2H2PF00096.269.1e-69313
ENSCAPP00000012225zf-C2H2PF00096.269.1e-69413
ENSCAPP00000012225zf-C2H2PF00096.269.1e-69513
ENSCAPP00000012225zf-C2H2PF00096.269.1e-69613
ENSCAPP00000012225zf-C2H2PF00096.269.1e-69713
ENSCAPP00000012225zf-C2H2PF00096.269.1e-69813
ENSCAPP00000012225zf-C2H2PF00096.269.1e-69913
ENSCAPP00000012225zf-C2H2PF00096.269.1e-691013
ENSCAPP00000012225zf-C2H2PF00096.269.1e-691113
ENSCAPP00000012225zf-C2H2PF00096.269.1e-691213
ENSCAPP00000012225zf-C2H2PF00096.269.1e-691313
ENSCAPP00000012232zf-metPF12874.79.7e-0912
ENSCAPP00000012232zf-metPF12874.79.7e-0922
ENSCAPP00000012221zf-metPF12874.79.8e-0912
ENSCAPP00000012221zf-metPF12874.79.8e-0922
ENSCAPP00000012214zf-metPF12874.79.9e-0912
ENSCAPP00000012214zf-metPF12874.79.9e-0922
ENSCAPP00000012225zf-metPF12874.72.4e-0812
ENSCAPP00000012225zf-metPF12874.72.4e-0822
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCAPT00000015975-1755-ENSCAPP00000012225584 (aa)--
ENSCAPT00000015982-1656-ENSCAPP00000012232551 (aa)--
ENSCAPT00000015971-1644-ENSCAPP00000012221547 (aa)--
ENSCAPT00000015964-1644-ENSCAPP00000012214547 (aa)--
Gene Model
Click here to download ENSCAPG00000013118's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000013118's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCAPG00000013118-7331.405ENSCAPG00000009522ZNF8657535.246
ENSCAPG00000013118-8032.500ENSCAPG00000006001ZNF6467532.292
ENSCAPG00000013118-9934.911ENSCAPG00000003638ZNF2127334.911
ENSCAPG00000013118-7645.161ENSCAPG00000009816ZNF2366841.667
ENSCAPG00000013118-7840.196ENSCAPG00000014002SNAI15640.196
ENSCAPG00000013118-9038.824ENSCAPG00000014613ZNF4239838.824
ENSCAPG00000013118-7245.000ENSCAPG00000012608-6345.000
ENSCAPG00000013118-9954.260ENSCAPG00000017499ZNF29954.260
ENSCAPG00000013118-7138.961ENSCAPG00000005775OVOL27138.961
ENSCAPG00000013118-9843.725ENSCAPG00000004697ZNF2026344.144
ENSCAPG00000013118-7334.906ENSCAPG00000004720ZNF5268634.906
ENSCAPG00000013118-8750.758ENSCAPG00000002667-7749.863
ENSCAPG00000013118-7539.782ENSCAPG00000007129ZNF3199739.782
ENSCAPG00000013118-7645.122ENSCAPG00000010404GFI1B6945.122
ENSCAPG00000013118-7336.986ENSCAPG00000000623ZNF7709836.986
ENSCAPG00000013118-7245.714ENSCAPG00000015217PRDM58345.714
ENSCAPG00000013118-7350.000ENSCAPG00000016268-10050.000
ENSCAPG00000013118-7344.578ENSCAPG00000000389ZNF5749345.238
ENSCAPG00000013118-7133.190ENSCAPG00000015862GTF3A8933.761
ENSCAPG00000013118-8654.015ENSCAPG00000016810ZFP698154.015
ENSCAPG00000013118-7953.722ENSCAPG00000006920-9953.722
ENSCAPG00000013118-7749.764ENSCAPG00000003129-8350.633
ENSCAPG00000013118-7246.667ENSCAPG00000005317ZNF3675246.667
ENSCAPG00000013118-8436.418ENSCAPG00000012228ZBTB485636.418
ENSCAPG00000013118-7839.098ENSCAPG00000013078SNAI27739.098
ENSCAPG00000013118-8541.758ENSCAPG00000000196ZFP645841.758
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCAPG00000013118-9980.201ENSCAFG00020003589-9585.545Canis_lupus_dingo
ENSCAPG00000013118-9976.975ENSTSYG00000008405-9875.987Carlito_syrichta
ENSCAPG00000013118-9986.995ENSCPOG00000034791-9888.364Cavia_porcellus
ENSCAPG00000013118-9786.422ENSCLAG00000014648-10086.422Chinchilla_lanigera
ENSCAPG00000013118-8683.074ENSCHOG00000008173-8382.806Choloepus_hoffmanni
ENSCAPG00000013118-7892.835ENSCHOG00000003898-10092.835Choloepus_hoffmanni
ENSCAPG00000013118-9978.788ENSCGRG00001021088Zfp354a9979.232Cricetulus_griseus_chok1gshd
ENSCAPG00000013118-9978.788ENSCGRG00000015037Zfp354a9979.232Cricetulus_griseus_crigri
ENSCAPG00000013118-7893.299ENSDNOG00000043806-10093.299Dasypus_novemcinctus
ENSCAPG00000013118-9980.919ENSDORG00000009396Zfp354a10079.821Dipodomys_ordii
ENSCAPG00000013118-8389.817ENSETEG00000020249-9781.612Echinops_telfairi
ENSCAPG00000013118-8681.871ENSEEUG00000008362-9781.980Erinaceus_europaeus
ENSCAPG00000013118-9981.514ENSFDAG00000015190-10080.385Fukomys_damarensis
ENSCAPG00000013118-9784.364ENSHGLG00000005975-9884.364Heterocephalus_glaber_female
ENSCAPG00000013118-8489.979ENSHGLG00100012284-9790.022Heterocephalus_glaber_male
ENSCAPG00000013118-8686.381ENSSTOG00000024118-9193.052Ictidomys_tridecemlineatus
ENSCAPG00000013118-8684.585ENSLAFG00000002909-9984.369Loxodonta_africana
ENSCAPG00000013118-8981.467ENSMAUG00000000735Zfp354a9183.333Mesocricetus_auratus
ENSCAPG00000013118-9979.089ENSMICG00000006390ZNF354A9879.089Microcebus_murinus
ENSCAPG00000013118-9976.728ENSMOCG00000003692Zfp354a9977.003Microtus_ochrogaster
ENSCAPG00000013118-9978.070MGP_CAROLIEiJ_G0016306Zfp354a9978.070Mus_caroli
ENSCAPG00000013118-9977.719ENSMUSG00000020364Zfp354a10076.789Mus_musculus
ENSCAPG00000013118-9879.292MGP_PahariEiJ_G0017441Zfp354a9879.292Mus_pahari
ENSCAPG00000013118-9979.078ENSNGAG00000011769Zfp354a10079.225Nannospalax_galili
ENSCAPG00000013118-8988.224ENSODEG00000008278-9290.850Octodon_degus
ENSCAPG00000013118-9981.345ENSPPAG00000039371ZNF354A10081.345Pan_paniscus
ENSCAPG00000013118-8686.133ENSPTRG00000017606ZNF354A9285.913Pan_troglodytes
ENSCAPG00000013118-9877.895ENSPEMG00000024167Zfp354a9877.895Peromyscus_maniculatus_bairdii
ENSCAPG00000013118-8586.207ENSUAMG00000000212-8786.755Ursus_americanus

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