EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000013218 (Gene tree)
Gene ID: -
Gene Symbol: RBM28
Alias: FLJ10377
Full Name: RNA binding motif protein 28
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Minus strand
Length: 23697 bases
Position: chrAVPZ01000023.1:48947994-48971690
Accession: 21863
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000012344	RRM_1	PF00076.22	6.2e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000016095	RBM28-201	1617	-	ENSCAPP00000012344	539 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000013218's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000013218's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000013218	RBM28	100	61.599	ENSG00000106344	RBM28	84	61.755	Homo_sapiens
ENSCAPG00000013218	RBM28	52	40.164	ENSAPOG00000015512	rbm28	78	41.818	Acanthochromis_polyacanthus
ENSCAPG00000013218	RBM28	97	58.649	ENSAMEG00000004776	RBM28	74	58.979	Ailuropoda_melanoleuca
ENSCAPG00000013218	RBM28	70	70.526	ENSAOCG00000000462	rbm28	78	41.925	Amphiprion_ocellaris
ENSCAPG00000013218	RBM28	76	61.600	ENSAPEG00000012996	rbm28	78	42.226	Amphiprion_percula
ENSCAPG00000013218	RBM28	71	77.778	ENSATEG00000001672	rbm28	80	37.739	Anabas_testudineus
ENSCAPG00000013218	RBM28	100	62.441	ENSANAG00000033922	RBM28	84	62.599	Aotus_nancymaae
ENSCAPG00000013218	RBM28	89	39.897	ENSACLG00000025024	rbm28	79	39.677	Astatotilapia_calliptera
ENSCAPG00000013218	RBM28	54	43.175	ENSAMXG00000000763	rbm28	85	44.751	Astyanax_mexicanus
ENSCAPG00000013218	RBM28	100	60.159	ENSBTAG00000017001	RBM28	83	60.606	Bos_taurus
ENSCAPG00000013218	RBM28	100	61.442	ENSCJAG00000017731	RBM28	84	61.285	Callithrix_jacchus
ENSCAPG00000013218	RBM28	100	61.526	ENSCAFG00000001667	RBM28	84	61.208	Canis_familiaris
ENSCAPG00000013218	RBM28	100	61.526	ENSCAFG00020021648	RBM28	84	61.208	Canis_lupus_dingo
ENSCAPG00000013218	RBM28	99	59.840	ENSCHIG00000014146	RBM28	83	59.585	Capra_hircus
ENSCAPG00000013218	RBM28	100	60.469	ENSTSYG00000002892	RBM28	72	59.513	Carlito_syrichta
ENSCAPG00000013218	RBM28	100	74.173	ENSCPOG00000006253	RBM28	84	76.063	Cavia_porcellus
ENSCAPG00000013218	RBM28	100	61.417	ENSCCAG00000035105	RBM28	84	62.047	Cebus_capucinus
ENSCAPG00000013218	RBM28	100	61.033	ENSCATG00000040497	RBM28	84	61.189	Cercocebus_atys
ENSCAPG00000013218	RBM28	100	63.116	ENSCLAG00000003707	RBM28	83	63.434	Chinchilla_lanigera
ENSCAPG00000013218	RBM28	100	61.478	ENSCSAG00000010161	RBM28	84	61.635	Chlorocebus_sabaeus
ENSCAPG00000013218	RBM28	95	34.506	ENSCING00000009238	-	66	34.642	Ciona_intestinalis
ENSCAPG00000013218	RBM28	100	60.034	ENSCANG00000038397	RBM28	82	59.864	Colobus_angolensis_palliatus
ENSCAPG00000013218	RBM28	89	88.462	ENSCGRG00001021278	Rbm28	84	52.695	Cricetulus_griseus_chok1gshd
ENSCAPG00000013218	RBM28	98	59.076	ENSCGRG00000005098	Rbm28	58	59.594	Cricetulus_griseus_crigri
ENSCAPG00000013218	RBM28	96	41.452	ENSCSEG00000004212	rbm28	82	40.605	Cynoglossus_semilaevis
ENSCAPG00000013218	RBM28	94	51.402	ENSDARG00000025332	rbm28	73	61.842	Danio_rerio
ENSCAPG00000013218	RBM28	99	59.874	ENSDNOG00000001124	RBM28	84	59.874	Dasypus_novemcinctus
ENSCAPG00000013218	RBM28	69	58.000	ENSDORG00000004184	Rbm28	88	58.222	Dipodomys_ordii
ENSCAPG00000013218	RBM28	73	34.234	FBgn0260456	CG4806	62	33.256	Drosophila_melanogaster
ENSCAPG00000013218	RBM28	99	50.000	ENSETEG00000007130	RBM28	83	51.200	Echinops_telfairi
ENSCAPG00000013218	RBM28	97	31.933	ENSEBUG00000004419	rbm28	75	34.636	Eptatretus_burgeri
ENSCAPG00000013218	RBM28	100	60.964	ENSEASG00005008528	RBM28	84	60.653	Equus_asinus_asinus
ENSCAPG00000013218	RBM28	100	60.248	ENSECAG00000007745	RBM28	84	59.938	Equus_caballus
ENSCAPG00000013218	RBM28	100	56.854	ENSEEUG00000002389	RBM28	84	55.226	Erinaceus_europaeus
ENSCAPG00000013218	RBM28	92	41.857	ENSELUG00000020602	rbm28	77	43.046	Esox_lucius
ENSCAPG00000013218	RBM28	98	60.328	ENSFCAG00000000946	RBM28	83	60.645	Felis_catus
ENSCAPG00000013218	RBM28	100	68.650	ENSFDAG00000010169	RBM28	83	68.650	Fukomys_damarensis
ENSCAPG00000013218	RBM28	58	39.286	ENSGAFG00000004802	rbm28	85	39.286	Gambusia_affinis
ENSCAPG00000013218	RBM28	79	35.327	ENSGACG00000012612	rbm28	89	35.888	Gasterosteus_aculeatus
ENSCAPG00000013218	RBM28	63	74.783	ENSGAGG00000008873	RBM28	60	84.932	Gopherus_agassizii
ENSCAPG00000013218	RBM28	100	61.852	ENSGGOG00000004644	RBM28	86	62.009	Gorilla_gorilla
ENSCAPG00000013218	RBM28	89	39.796	ENSHBUG00000009611	rbm28	83	40.163	Haplochromis_burtoni
ENSCAPG00000013218	RBM28	97	68.534	ENSHGLG00000005409	RBM28	83	68.971	Heterocephalus_glaber_female
ENSCAPG00000013218	RBM28	97	68.534	ENSHGLG00100016458	RBM28	83	68.971	Heterocephalus_glaber_male
ENSCAPG00000013218	RBM28	100	62.773	ENSSTOG00000002169	RBM28	84	62.773	Ictidomys_tridecemlineatus
ENSCAPG00000013218	RBM28	97	56.158	ENSJJAG00000022400	Rbm28	83	57.348	Jaculus_jaculus
ENSCAPG00000013218	RBM28	58	39.286	ENSLBEG00000012998	rbm28	77	41.244	Labrus_bergylta
ENSCAPG00000013218	RBM28	77	45.639	ENSLACG00000010485	-	81	46.256	Latimeria_chalumnae
ENSCAPG00000013218	RBM28	82	74.026	ENSLOCG00000015541	rbm28	61	73.684	Lepisosteus_oculatus
ENSCAPG00000013218	RBM28	100	59.810	ENSLAFG00000010717	RBM28	84	59.177	Loxodonta_africana
ENSCAPG00000013218	RBM28	100	61.346	ENSMFAG00000031036	RBM28	84	61.346	Macaca_fascicularis
ENSCAPG00000013218	RBM28	100	61.250	ENSMMUG00000007250	RBM28	84	61.250	Macaca_mulatta
ENSCAPG00000013218	RBM28	100	60.897	ENSMNEG00000036970	RBM28	84	60.714	Macaca_nemestrina
ENSCAPG00000013218	RBM28	86	77.778	ENSMLEG00000037717	RBM28	80	77.778	Mandrillus_leucophaeus
ENSCAPG00000013218	RBM28	91	42.215	ENSMAMG00000008525	rbm28	77	41.455	Mastacembelus_armatus
ENSCAPG00000013218	RBM28	89	39.897	ENSMZEG00005019625	rbm28	85	39.839	Maylandia_zebra
ENSCAPG00000013218	RBM28	93	55.825	ENSMAUG00000002263	Rbm28	84	56.154	Mesocricetus_auratus
ENSCAPG00000013218	RBM28	100	60.676	ENSMICG00000000107	RBM28	90	60.983	Microcebus_murinus
ENSCAPG00000013218	RBM28	93	58.431	ENSMOCG00000014615	Rbm28	83	60.800	Microtus_ochrogaster
ENSCAPG00000013218	RBM28	56	40.947	ENSMMOG00000008600	rbm28	90	40.295	Mola_mola
ENSCAPG00000013218	RBM28	94	51.650	ENSMODG00000015151	RBM28	83	53.846	Monodelphis_domestica
ENSCAPG00000013218	RBM28	56	39.791	ENSMALG00000006419	rbm28	76	40.134	Monopterus_albus
ENSCAPG00000013218	RBM28	100	61.943	MGP_CAROLIEiJ_G0028162	Rbm28	83	61.943	Mus_caroli
ENSCAPG00000013218	RBM28	100	62.300	ENSMUSG00000029701	Rbm28	83	61.821	Mus_musculus
ENSCAPG00000013218	RBM28	100	62.162	MGP_PahariEiJ_G0021920	Rbm28	83	61.526	Mus_pahari
ENSCAPG00000013218	RBM28	100	62.460	MGP_SPRETEiJ_G0029162	Rbm28	83	61.981	Mus_spretus
ENSCAPG00000013218	RBM28	99	59.588	ENSMPUG00000006511	RBM28	83	59.242	Mustela_putorius_furo
ENSCAPG00000013218	RBM28	97	59.903	ENSMLUG00000002186	RBM28	83	59.843	Myotis_lucifugus
ENSCAPG00000013218	RBM28	99	60.813	ENSNGAG00000006480	-	83	60.813	Nannospalax_galili
ENSCAPG00000013218	RBM28	99	59.804	ENSNGAG00000017946	-	83	59.512	Nannospalax_galili
ENSCAPG00000013218	RBM28	100	61.682	ENSNLEG00000012307	RBM28	84	61.215	Nomascus_leucogenys
ENSCAPG00000013218	RBM28	75	82.000	ENSMEUG00000009611	RBM28	78	80.000	Notamacropus_eugenii
ENSCAPG00000013218	RBM28	91	64.103	ENSOPRG00000015140	RBM28	71	64.103	Ochotona_princeps
ENSCAPG00000013218	RBM28	100	67.869	ENSODEG00000003213	-	83	67.869	Octodon_degus
ENSCAPG00000013218	RBM28	75	89.831	ENSODEG00000013217	-	72	80.303	Octodon_degus
ENSCAPG00000013218	RBM28	96	49.120	ENSOANG00000000815	-	78	50.250	Ornithorhynchus_anatinus
ENSCAPG00000013218	RBM28	100	59.409	ENSOCUG00000003009	RBM28	84	59.565	Oryctolagus_cuniculus
ENSCAPG00000013218	RBM28	93	40.789	ENSORLG00000009636	rbm28	77	42.353	Oryzias_latipes
ENSCAPG00000013218	RBM28	79	66.667	ENSORLG00015015030	rbm28	72	77.215	Oryzias_latipes_hsok
ENSCAPG00000013218	RBM28	93	57.301	ENSOGAG00000006011	RBM28	86	57.116	Otolemur_garnettii
ENSCAPG00000013218	RBM28	100	59.076	ENSOARG00000002547	RBM28	83	59.040	Ovis_aries
ENSCAPG00000013218	RBM28	100	61.094	ENSPPAG00000041730	RBM28	84	61.250	Pan_paniscus
ENSCAPG00000013218	RBM28	98	60.492	ENSPPRG00000004420	RBM28	83	60.806	Panthera_pardus
ENSCAPG00000013218	RBM28	98	60.328	ENSPTIG00000008550	RBM28	83	60.645	Panthera_tigris_altaica
ENSCAPG00000013218	RBM28	100	61.406	ENSPTRG00000019659	RBM28	84	61.562	Pan_troglodytes
ENSCAPG00000013218	RBM28	100	61.250	ENSPANG00000022295	RBM28	84	61.406	Papio_anubis
ENSCAPG00000013218	RBM28	94	39.780	ENSPKIG00000023453	rbm28	82	40.123	Paramormyrops_kingsleyae
ENSCAPG00000013218	RBM28	62	77.778	ENSPMGG00000012840	rbm28	77	39.020	Periophthalmus_magnuspinnatus
ENSCAPG00000013218	RBM28	100	60.292	ENSPEMG00000020673	Rbm28	83	60.778	Peromyscus_maniculatus_bairdii
ENSCAPG00000013218	RBM28	95	53.571	ENSPCIG00000012810	RBM28	83	54.080	Phascolarctos_cinereus
ENSCAPG00000013218	RBM28	81	52.000	ENSPFOG00000018209	rbm28	83	39.252	Poecilia_formosa
ENSCAPG00000013218	RBM28	84	49.640	ENSPLAG00000016078	rbm28	80	39.213	Poecilia_latipinna
ENSCAPG00000013218	RBM28	81	52.000	ENSPMEG00000004292	rbm28	87	39.191	Poecilia_mexicana
ENSCAPG00000013218	RBM28	95	38.226	ENSPREG00000014287	rbm28	83	38.365	Poecilia_reticulata
ENSCAPG00000013218	RBM28	100	62.047	ENSPPYG00000017975	RBM28	84	62.205	Pongo_abelii
ENSCAPG00000013218	RBM28	73	56.522	ENSPCAG00000008223	RBM28	70	56.522	Procavia_capensis
ENSCAPG00000013218	RBM28	100	61.335	ENSPCOG00000016797	RBM28	84	61.646	Propithecus_coquereli
ENSCAPG00000013218	RBM28	70	83.478	ENSPVAG00000005443	RBM28	52	83.478	Pteropus_vampyrus
ENSCAPG00000013218	RBM28	89	39.726	ENSPNYG00000014003	rbm28	79	39.936	Pundamilia_nyererei
ENSCAPG00000013218	RBM28	98	60.714	ENSRNOG00000005468	Rbm28	82	60.972	Rattus_norvegicus
ENSCAPG00000013218	RBM28	100	60.842	ENSRBIG00000033990	RBM28	84	60.998	Rhinopithecus_bieti
ENSCAPG00000013218	RBM28	100	61.997	ENSRROG00000040747	RBM28	83	62.158	Rhinopithecus_roxellana
ENSCAPG00000013218	RBM28	100	53.045	ENSSHAG00000017017	RBM28	81	52.941	Sarcophilus_harrisii
ENSCAPG00000013218	RBM28	56	42.017	ENSSMAG00000003885	rbm28	88	41.709	Scophthalmus_maximus
ENSCAPG00000013218	RBM28	58	39.850	ENSSDUG00000014270	rbm28	87	39.514	Seriola_dumerili
ENSCAPG00000013218	RBM28	77	64.356	ENSSLDG00000020099	rbm28	83	40.769	Seriola_lalandi_dorsalis
ENSCAPG00000013218	RBM28	78	75.490	ENSSARG00000008303	RBM28	70	75.490	Sorex_araneus
ENSCAPG00000013218	RBM28	66	75.000	ENSSPUG00000000838	RBM28	74	75.000	Sphenodon_punctatus
ENSCAPG00000013218	RBM28	53	38.904	ENSSPAG00000023305	rbm28	82	41.089	Stegastes_partitus
ENSCAPG00000013218	RBM28	100	60.157	ENSSSCG00000031847	RBM28	84	60.630	Sus_scrofa
ENSCAPG00000013218	RBM28	93	40.097	ENSTNIG00000017962	rbm28	79	39.374	Tetraodon_nigroviridis
ENSCAPG00000013218	RBM28	88	65.161	ENSTBEG00000012749	RBM28	72	65.161	Tupaia_belangeri
ENSCAPG00000013218	RBM28	100	56.447	ENSTTRG00000013647	RBM28	84	55.521	Tursiops_truncatus
ENSCAPG00000013218	RBM28	99	56.684	ENSUAMG00000006949	RBM28	81	56.514	Ursus_americanus
ENSCAPG00000013218	RBM28	99	60.731	ENSUMAG00000005997	RBM28	83	60.413	Ursus_maritimus
ENSCAPG00000013218	RBM28	86	60.145	ENSVPAG00000008304	RBM28	81	52.443	Vicugna_pacos
ENSCAPG00000013218	RBM28	100	61.367	ENSVVUG00000007270	RBM28	84	61.049	Vulpes_vulpes
ENSCAPG00000013218	RBM28	94	42.536	ENSXETG00000009271	rbm28	71	59.783	Xenopus_tropicalis
ENSCAPG00000013218	RBM28	56	40.860	ENSXCOG00000020357	rbm28	87	40.048	Xiphophorus_couchianus
ENSCAPG00000013218	RBM28	81	50.360	ENSXMAG00000004415	rbm28	81	39.807	Xiphophorus_maculatus