EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAPG00000013479 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 1042 bases
Position: chrAVPZ01000256.1:414413-415454
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000012673	MMR_HSR1	PF01926.23	3.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000016428	-	603	-	ENSCAPP00000012673	201 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000013479's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000013479's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAPG00000013479	-	91	42.623	ENSCAPG00000007631	-	59	42.623
ENSCAPG00000013479	-	97	42.788	ENSCAPG00000011595	GIMAP1	73	42.788

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000013479	-	95	69.634	ENSG00000133574	GIMAP4	77	75.000	Homo_sapiens
ENSCAPG00000013479	-	97	66.495	ENSAMEG00000019628	-	61	66.495	Ailuropoda_melanoleuca
ENSCAPG00000013479	-	97	67.526	ENSAMEG00000019779	-	61	67.526	Ailuropoda_melanoleuca
ENSCAPG00000013479	-	95	72.775	ENSANAG00000037676	GIMAP4	56	72.775	Aotus_nancymaae
ENSCAPG00000013479	-	92	65.405	ENSBTAG00000054649	-	59	65.405	Bos_taurus
ENSCAPG00000013479	-	96	61.979	ENSBTAG00000046257	GIMAP4	60	61.979	Bos_taurus
ENSCAPG00000013479	-	95	73.822	ENSCJAG00000047018	GIMAP4	58	73.822	Callithrix_jacchus
ENSCAPG00000013479	-	97	71.134	ENSCAFG00000004579	GIMAP4	59	71.134	Canis_familiaris
ENSCAPG00000013479	-	97	71.134	ENSCAFG00020006498	GIMAP4	53	71.134	Canis_lupus_dingo
ENSCAPG00000013479	-	94	62.766	ENSCHIG00000005581	-	83	63.934	Capra_hircus
ENSCAPG00000013479	-	95	63.874	ENSCHIG00000023846	-	78	64.130	Capra_hircus
ENSCAPG00000013479	-	94	66.489	ENSCHIG00000013558	-	59	66.489	Capra_hircus
ENSCAPG00000013479	-	93	56.989	ENSCHIG00000023365	-	58	56.989	Capra_hircus
ENSCAPG00000013479	-	92	68.108	ENSCHIG00000019645	-	75	68.539	Capra_hircus
ENSCAPG00000013479	-	94	64.894	ENSCHIG00000020146	-	59	64.894	Capra_hircus
ENSCAPG00000013479	-	95	70.157	ENSTSYG00000000820	GIMAP4	55	70.157	Carlito_syrichta
ENSCAPG00000013479	-	96	100.000	ENSCPOG00000037321	GIMAP4	61	100.000	Cavia_porcellus
ENSCAPG00000013479	-	97	71.134	ENSCCAG00000033055	GIMAP4	68	71.134	Cebus_capucinus
ENSCAPG00000013479	-	94	71.958	ENSCATG00000038688	GIMAP4	66	71.958	Cercocebus_atys
ENSCAPG00000013479	-	95	71.204	ENSCSAG00000006878	GIMAP4	58	71.204	Chlorocebus_sabaeus
ENSCAPG00000013479	-	95	71.204	ENSCANG00000012786	GIMAP4	58	71.204	Colobus_angolensis_palliatus
ENSCAPG00000013479	-	96	70.466	ENSCGRG00001019121	Gimap4	88	70.466	Cricetulus_griseus_chok1gshd
ENSCAPG00000013479	-	96	70.466	ENSCGRG00000014410	Gimap4	88	70.466	Cricetulus_griseus_crigri
ENSCAPG00000013479	-	94	60.526	ENSECAG00000007681	-	57	60.526	Equus_caballus
ENSCAPG00000013479	-	80	56.098	ENSEEUG00000000786	-	93	56.098	Erinaceus_europaeus
ENSCAPG00000013479	-	93	63.441	ENSEEUG00000007079	-	58	63.441	Erinaceus_europaeus
ENSCAPG00000013479	-	95	67.539	ENSEEUG00000012080	-	62	67.539	Erinaceus_europaeus
ENSCAPG00000013479	-	95	72.632	ENSFCAG00000041619	-	58	72.632	Felis_catus
ENSCAPG00000013479	-	95	73.684	ENSFCAG00000039272	-	58	73.684	Felis_catus
ENSCAPG00000013479	-	97	77.320	ENSFDAG00000016925	GIMAP4	61	77.320	Fukomys_damarensis
ENSCAPG00000013479	-	95	69.634	ENSGGOG00000002351	GIMAP4	58	69.634	Gorilla_gorilla
ENSCAPG00000013479	-	95	78.534	ENSHGLG00000013893	GIMAP4	60	78.534	Heterocephalus_glaber_female
ENSCAPG00000013479	-	95	79.058	ENSHGLG00100007039	GIMAP4	60	79.058	Heterocephalus_glaber_male
ENSCAPG00000013479	-	95	71.204	ENSMFAG00000001041	GIMAP4	67	71.204	Macaca_fascicularis
ENSCAPG00000013479	-	95	71.204	ENSMMUG00000011386	GIMAP4	67	71.204	Macaca_mulatta
ENSCAPG00000013479	-	95	71.204	ENSMNEG00000028648	GIMAP4	67	71.204	Macaca_nemestrina
ENSCAPG00000013479	-	94	71.958	ENSMLEG00000030303	GIMAP4	66	71.958	Mandrillus_leucophaeus
ENSCAPG00000013479	-	97	68.557	ENSMAUG00000014099	Gimap4	61	68.557	Mesocricetus_auratus
ENSCAPG00000013479	-	92	70.109	ENSMICG00000038028	GIMAP4	57	70.109	Microcebus_murinus
ENSCAPG00000013479	-	97	70.103	ENSMOCG00000000523	Gimap4	83	70.103	Microtus_ochrogaster
ENSCAPG00000013479	-	98	64.975	MGP_CAROLIEiJ_G0028349	Gimap4	90	64.975	Mus_caroli
ENSCAPG00000013479	-	98	67.005	ENSMUSG00000054435	Gimap4	90	67.005	Mus_musculus
ENSCAPG00000013479	-	98	67.513	MGP_SPRETEiJ_G0029352	Gimap4	90	67.513	Mus_spretus
ENSCAPG00000013479	-	97	60.825	ENSMLUG00000026208	-	65	60.825	Myotis_lucifugus
ENSCAPG00000013479	-	96	64.249	ENSMLUG00000026238	-	59	64.249	Myotis_lucifugus
ENSCAPG00000013479	-	91	62.295	ENSMLUG00000010885	-	66	62.295	Myotis_lucifugus
ENSCAPG00000013479	-	96	57.292	ENSMLUG00000025412	-	61	57.292	Myotis_lucifugus
ENSCAPG00000013479	-	97	56.853	ENSMLUG00000028074	-	59	56.853	Myotis_lucifugus
ENSCAPG00000013479	-	97	64.948	ENSMLUG00000022191	-	58	64.948	Myotis_lucifugus
ENSCAPG00000013479	-	95	70.526	ENSNGAG00000019504	Gimap4	58	70.526	Nannospalax_galili
ENSCAPG00000013479	-	95	70.681	ENSNLEG00000003833	GIMAP4	56	70.681	Nomascus_leucogenys
ENSCAPG00000013479	-	97	58.974	ENSMEUG00000011721	-	66	58.974	Notamacropus_eugenii
ENSCAPG00000013479	-	97	60.000	ENSMEUG00000003459	-	65	60.000	Notamacropus_eugenii
ENSCAPG00000013479	-	95	65.789	ENSOPRG00000013098	GIMAP4	59	65.789	Ochotona_princeps
ENSCAPG00000013479	-	95	72.632	ENSODEG00000011659	GIMAP4	62	72.632	Octodon_degus
ENSCAPG00000013479	-	92	71.196	ENSOGAG00000026711	-	54	71.196	Otolemur_garnettii
ENSCAPG00000013479	-	92	71.196	ENSOGAG00000001580	-	56	71.196	Otolemur_garnettii
ENSCAPG00000013479	-	92	69.565	ENSOGAG00000025737	-	61	69.565	Otolemur_garnettii
ENSCAPG00000013479	-	92	65.217	ENSOGAG00000002647	-	64	65.217	Otolemur_garnettii
ENSCAPG00000013479	-	94	65.957	ENSOARG00000001492	-	59	65.957	Ovis_aries
ENSCAPG00000013479	-	91	66.667	ENSOARG00000002143	-	58	66.667	Ovis_aries
ENSCAPG00000013479	-	92	63.243	ENSOARG00000001537	-	58	63.243	Ovis_aries
ENSCAPG00000013479	-	92	57.838	ENSOARG00000001365	-	58	57.838	Ovis_aries
ENSCAPG00000013479	-	97	63.402	ENSOARG00000001318	-	61	63.874	Ovis_aries
ENSCAPG00000013479	-	91	67.213	ENSOARG00000001437	-	59	67.213	Ovis_aries
ENSCAPG00000013479	-	95	69.634	ENSPPAG00000039067	GIMAP4	58	69.634	Pan_paniscus
ENSCAPG00000013479	-	94	71.429	ENSPPRG00000024199	-	84	71.429	Panthera_pardus
ENSCAPG00000013479	-	93	64.516	ENSPPRG00000020973	-	69	64.516	Panthera_pardus
ENSCAPG00000013479	-	95	72.105	ENSPTIG00000008974	-	57	72.105	Panthera_tigris_altaica
ENSCAPG00000013479	-	89	65.730	ENSPTIG00000012391	-	78	65.730	Panthera_tigris_altaica
ENSCAPG00000013479	-	95	69.634	ENSPTRG00000019859	GIMAP4	58	69.634	Pan_troglodytes
ENSCAPG00000013479	-	95	69.634	ENSPTRG00000047736	-	58	69.634	Pan_troglodytes
ENSCAPG00000013479	-	95	71.204	ENSPANG00000022511	GIMAP4	67	71.204	Papio_anubis
ENSCAPG00000013479	-	91	56.522	ENSPSIG00000000567	-	59	56.522	Pelodiscus_sinensis
ENSCAPG00000013479	-	94	55.556	ENSPSIG00000004902	-	54	55.556	Pelodiscus_sinensis
ENSCAPG00000013479	-	97	70.619	ENSPEMG00000008007	Gimap4	87	71.354	Peromyscus_maniculatus_bairdii
ENSCAPG00000013479	-	97	62.051	ENSPCIG00000026520	-	54	62.051	Phascolarctos_cinereus
ENSCAPG00000013479	-	97	60.513	ENSPCIG00000026522	-	61	60.513	Phascolarctos_cinereus
ENSCAPG00000013479	-	95	61.979	ENSPCIG00000016007	-	58	61.979	Phascolarctos_cinereus
ENSCAPG00000013479	-	95	68.586	ENSPPYG00000018171	GIMAP4	58	68.586	Pongo_abelii
ENSCAPG00000013479	-	92	69.022	ENSPCOG00000022284	GIMAP4	57	69.022	Propithecus_coquereli
ENSCAPG00000013479	-	96	69.792	ENSPVAG00000001212	GIMAP4	60	69.792	Pteropus_vampyrus
ENSCAPG00000013479	-	95	66.492	ENSRNOG00000008369	Gimap4	61	67.196	Rattus_norvegicus
ENSCAPG00000013479	-	95	71.728	ENSRBIG00000028867	GIMAP4	58	71.728	Rhinopithecus_bieti
ENSCAPG00000013479	-	95	71.728	ENSRROG00000043219	GIMAP4	58	71.728	Rhinopithecus_roxellana
ENSCAPG00000013479	-	95	73.298	ENSSBOG00000031262	GIMAP4	67	73.298	Saimiri_boliviensis_boliviensis
ENSCAPG00000013479	-	97	57.949	ENSSHAG00000000842	-	59	57.949	Sarcophilus_harrisii
ENSCAPG00000013479	-	97	60.894	ENSSHAG00000011315	-	75	60.894	Sarcophilus_harrisii
ENSCAPG00000013479	-	96	61.458	ENSSARG00000006448	-	65	61.458	Sorex_araneus
ENSCAPG00000013479	-	96	65.285	ENSSARG00000008956	-	60	65.285	Sorex_araneus
ENSCAPG00000013479	-	92	56.216	ENSSPUG00000012235	-	53	56.216	Sphenodon_punctatus
ENSCAPG00000013479	-	92	55.376	ENSSPUG00000009782	-	78	56.354	Sphenodon_punctatus
ENSCAPG00000013479	-	95	65.263	ENSSSCG00000027826	-	60	65.263	Sus_scrofa
ENSCAPG00000013479	-	94	67.553	ENSTBEG00000016415	GIMAP4	61	67.553	Tupaia_belangeri
ENSCAPG00000013479	-	95	70.681	ENSTTRG00000013056	GIMAP4	59	70.681	Tursiops_truncatus
ENSCAPG00000013479	-	97	67.526	ENSUAMG00000004050	-	60	67.526	Ursus_americanus
ENSCAPG00000013479	-	97	67.526	ENSUAMG00000005488	-	59	67.526	Ursus_americanus
ENSCAPG00000013479	-	97	67.526	ENSUMAG00000000843	GIMAP4	67	67.526	Ursus_maritimus
ENSCAPG00000013479	-	97	70.619	ENSVVUG00000009157	GIMAP4	59	70.619	Vulpes_vulpes