EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000013575 (Gene tree)
Gene ID: -
Gene Symbol: RCL1
Alias: RNAC|RPCL1
Full Name: RNA terminal phosphate cyclase like 1
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Minus strand
Length: 33093 bases
Position: chrAVPZ01000134.1:14983610-15016702
Accession: 17687
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000012810	RTC	PF01137.21	8.8e-25	1	1
ENSCAPP00000012810	RTC_insert	PF05189.13	0.0001	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000016566	RCL1-201	654	-	ENSCAPP00000012810	217 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000013575's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000013575's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000013575	RCL1	100	80.925	ENSG00000120158	RCL1	68	80.925	Homo_sapiens
ENSCAPG00000013575	RCL1	100	66.102	ENSAPOG00000015666	rcl1	70	66.102	Acanthochromis_polyacanthus
ENSCAPG00000013575	RCL1	100	79.191	ENSAMEG00000002631	RCL1	68	79.191	Ailuropoda_melanoleuca
ENSCAPG00000013575	RCL1	100	67.901	ENSACIG00000021195	rcl1	66	67.901	Amphilophus_citrinellus
ENSCAPG00000013575	RCL1	100	66.102	ENSAOCG00000002223	rcl1	70	66.102	Amphiprion_ocellaris
ENSCAPG00000013575	RCL1	100	66.102	ENSAPEG00000006905	rcl1	70	66.102	Amphiprion_percula
ENSCAPG00000013575	RCL1	99	65.839	ENSATEG00000020026	rcl1	66	65.839	Anabas_testudineus
ENSCAPG00000013575	RCL1	100	74.691	ENSAPLG00000006031	RCL1	75	74.691	Anas_platyrhynchos
ENSCAPG00000013575	RCL1	100	72.222	ENSACAG00000003640	RCL1	66	72.222	Anolis_carolinensis
ENSCAPG00000013575	RCL1	100	79.769	ENSANAG00000037372	RCL1	68	79.769	Aotus_nancymaae
ENSCAPG00000013575	RCL1	100	66.667	ENSACLG00000021724	rcl1	66	66.667	Astatotilapia_calliptera
ENSCAPG00000013575	RCL1	100	65.537	ENSAMXG00000033394	rcl1	70	65.537	Astyanax_mexicanus
ENSCAPG00000013575	RCL1	99	40.659	WBGene00022852	ZK1127.5	69	40.659	Caenorhabditis_elegans
ENSCAPG00000013575	RCL1	100	80.925	ENSCJAG00000011202	RCL1	68	80.925	Callithrix_jacchus
ENSCAPG00000013575	RCL1	100	79.191	ENSCAFG00000002091	RCL1	68	79.191	Canis_familiaris
ENSCAPG00000013575	RCL1	100	79.191	ENSCAFG00020000638	RCL1	53	79.191	Canis_lupus_dingo
ENSCAPG00000013575	RCL1	100	78.613	ENSCHIG00000012407	RCL1	68	78.613	Capra_hircus
ENSCAPG00000013575	RCL1	100	81.503	ENSTSYG00000009592	RCL1	68	81.503	Carlito_syrichta
ENSCAPG00000013575	RCL1	100	83.237	ENSCPOG00000015354	RCL1	68	83.237	Cavia_porcellus
ENSCAPG00000013575	RCL1	100	80.925	ENSCCAG00000033505	RCL1	68	80.925	Cebus_capucinus
ENSCAPG00000013575	RCL1	100	80.347	ENSCATG00000034721	RCL1	68	80.347	Cercocebus_atys
ENSCAPG00000013575	RCL1	100	80.925	ENSCLAG00000007445	RCL1	68	80.925	Chinchilla_lanigera
ENSCAPG00000013575	RCL1	100	80.925	ENSCSAG00000008811	RCL1	68	80.925	Chlorocebus_sabaeus
ENSCAPG00000013575	RCL1	73	69.767	ENSCHOG00000007216	RCL1	53	69.767	Choloepus_hoffmanni
ENSCAPG00000013575	RCL1	100	73.410	ENSCPBG00000025481	RCL1	73	73.410	Chrysemys_picta_bellii
ENSCAPG00000013575	RCL1	100	49.383	ENSCING00000019565	-	66	49.383	Ciona_intestinalis
ENSCAPG00000013575	RCL1	100	80.925	ENSCANG00000027099	RCL1	68	80.925	Colobus_angolensis_palliatus
ENSCAPG00000013575	RCL1	100	80.347	ENSCGRG00001013748	Rcl1	68	80.347	Cricetulus_griseus_chok1gshd
ENSCAPG00000013575	RCL1	100	80.347	ENSCGRG00000005843	Rcl1	77	80.347	Cricetulus_griseus_crigri
ENSCAPG00000013575	RCL1	100	68.208	ENSCSEG00000000712	rcl1	67	68.208	Cynoglossus_semilaevis
ENSCAPG00000013575	RCL1	100	69.136	ENSCVAG00000011536	rcl1	66	69.136	Cyprinodon_variegatus
ENSCAPG00000013575	RCL1	100	63.006	ENSDARG00000038312	rcl1	69	63.006	Danio_rerio
ENSCAPG00000013575	RCL1	71	76.190	ENSDNOG00000019911	RCL1	72	76.190	Dasypus_novemcinctus
ENSCAPG00000013575	RCL1	100	85.185	ENSDORG00000015645	Rcl1	66	85.185	Dipodomys_ordii
ENSCAPG00000013575	RCL1	98	51.553	FBgn0020909	Rtc1	64	51.553	Drosophila_melanogaster
ENSCAPG00000013575	RCL1	99	50.932	ENSEBUG00000016621	-	66	50.932	Eptatretus_burgeri
ENSCAPG00000013575	RCL1	100	81.503	ENSEASG00005010653	RCL1	68	81.503	Equus_asinus_asinus
ENSCAPG00000013575	RCL1	100	81.503	ENSECAG00000015973	RCL1	68	81.503	Equus_caballus
ENSCAPG00000013575	RCL1	89	77.181	ENSEEUG00000009801	RCL1	59	77.181	Erinaceus_europaeus
ENSCAPG00000013575	RCL1	100	66.272	ENSELUG00000007353	rcl1	67	66.272	Esox_lucius
ENSCAPG00000013575	RCL1	100	80.347	ENSFCAG00000014557	RCL1	68	80.347	Felis_catus
ENSCAPG00000013575	RCL1	100	74.691	ENSFALG00000010553	RCL1	65	74.691	Ficedula_albicollis
ENSCAPG00000013575	RCL1	100	80.347	ENSFDAG00000004209	RCL1	78	80.347	Fukomys_damarensis
ENSCAPG00000013575	RCL1	100	69.136	ENSFHEG00000011228	rcl1	68	69.136	Fundulus_heteroclitus
ENSCAPG00000013575	RCL1	100	66.272	ENSGMOG00000004677	rcl1	67	66.272	Gadus_morhua
ENSCAPG00000013575	RCL1	100	74.691	ENSGALG00000015024	RCL1	66	74.691	Gallus_gallus
ENSCAPG00000013575	RCL1	100	69.753	ENSGAFG00000007257	rcl1	66	69.753	Gambusia_affinis
ENSCAPG00000013575	RCL1	100	68.639	ENSGACG00000017474	rcl1	67	68.639	Gasterosteus_aculeatus
ENSCAPG00000013575	RCL1	100	73.410	ENSGAGG00000003689	RCL1	68	73.410	Gopherus_agassizii
ENSCAPG00000013575	RCL1	100	80.347	ENSGGOG00000015041	RCL1	68	80.347	Gorilla_gorilla
ENSCAPG00000013575	RCL1	100	65.680	ENSHBUG00000001393	rcl1	67	65.680	Haplochromis_burtoni
ENSCAPG00000013575	RCL1	100	81.503	ENSHGLG00000016452	RCL1	68	81.503	Heterocephalus_glaber_female
ENSCAPG00000013575	RCL1	100	67.470	ENSHGLG00000005368	-	65	67.470	Heterocephalus_glaber_female
ENSCAPG00000013575	RCL1	100	67.470	ENSHGLG00100018010	-	66	67.470	Heterocephalus_glaber_male
ENSCAPG00000013575	RCL1	100	81.503	ENSHGLG00100008718	-	73	81.503	Heterocephalus_glaber_male
ENSCAPG00000013575	RCL1	100	66.667	ENSHCOG00000020170	rcl1	66	66.667	Hippocampus_comes
ENSCAPG00000013575	RCL1	100	65.318	ENSIPUG00000018054	RCL1	69	65.318	Ictalurus_punctatus
ENSCAPG00000013575	RCL1	100	81.065	ENSSTOG00000000023	RCL1	67	81.065	Ictidomys_tridecemlineatus
ENSCAPG00000013575	RCL1	95	76.687	ENSJJAG00000015632	-	66	76.687	Jaculus_jaculus
ENSCAPG00000013575	RCL1	100	80.347	ENSJJAG00000022803	-	68	80.347	Jaculus_jaculus
ENSCAPG00000013575	RCL1	100	66.102	ENSKMAG00000011946	rcl1	70	66.102	Kryptolebias_marmoratus
ENSCAPG00000013575	RCL1	100	65.318	ENSLBEG00000003957	rcl1	72	65.318	Labrus_bergylta
ENSCAPG00000013575	RCL1	68	72.222	ENSLACG00000004594	RCL1	50	72.222	Latimeria_chalumnae
ENSCAPG00000013575	RCL1	100	67.630	ENSLOCG00000010148	rcl1	67	67.630	Lepisosteus_oculatus
ENSCAPG00000013575	RCL1	100	79.290	ENSLAFG00000017495	RCL1	67	79.290	Loxodonta_africana
ENSCAPG00000013575	RCL1	100	80.925	ENSMFAG00000037906	RCL1	68	80.925	Macaca_fascicularis
ENSCAPG00000013575	RCL1	100	80.925	ENSMNEG00000012288	RCL1	68	80.925	Macaca_nemestrina
ENSCAPG00000013575	RCL1	100	80.925	ENSMLEG00000043088	RCL1	68	80.925	Mandrillus_leucophaeus
ENSCAPG00000013575	RCL1	100	67.456	ENSMAMG00000008311	rcl1	67	67.456	Mastacembelus_armatus
ENSCAPG00000013575	RCL1	100	66.667	ENSMZEG00005017292	rcl1	66	66.667	Maylandia_zebra
ENSCAPG00000013575	RCL1	54	66.265	ENSMGAG00000002245	RCL1	59	66.265	Meleagris_gallopavo
ENSCAPG00000013575	RCL1	55	73.810	ENSMAUG00000008922	Rcl1	63	73.810	Mesocricetus_auratus
ENSCAPG00000013575	RCL1	100	80.925	ENSMICG00000015562	RCL1	68	80.925	Microcebus_murinus
ENSCAPG00000013575	RCL1	100	79.769	ENSMOCG00000012145	Rcl1	68	79.769	Microtus_ochrogaster
ENSCAPG00000013575	RCL1	100	66.258	ENSMMOG00000021264	rcl1	66	66.258	Mola_mola
ENSCAPG00000013575	RCL1	91	80.864	ENSMODG00000015377	RCL1	60	80.864	Monodelphis_domestica
ENSCAPG00000013575	RCL1	100	66.049	ENSMALG00000018618	rcl1	66	66.049	Monopterus_albus
ENSCAPG00000013575	RCL1	100	80.925	MGP_CAROLIEiJ_G0022853	Rcl1	68	80.925	Mus_caroli
ENSCAPG00000013575	RCL1	100	80.347	ENSMUSG00000024785	Rcl1	68	80.347	Mus_musculus
ENSCAPG00000013575	RCL1	100	79.769	MGP_PahariEiJ_G0014346	Rcl1	68	79.769	Mus_pahari
ENSCAPG00000013575	RCL1	100	79.769	MGP_SPRETEiJ_G0023771	Rcl1	68	79.769	Mus_spretus
ENSCAPG00000013575	RCL1	100	77.457	ENSMPUG00000004998	RCL1	68	77.457	Mustela_putorius_furo
ENSCAPG00000013575	RCL1	100	77.457	ENSMLUG00000009654	RCL1	68	77.457	Myotis_lucifugus
ENSCAPG00000013575	RCL1	100	79.769	ENSNGAG00000015327	Rcl1	68	79.769	Nannospalax_galili
ENSCAPG00000013575	RCL1	100	65.432	ENSNBRG00000019854	rcl1	67	65.432	Neolamprologus_brichardi
ENSCAPG00000013575	RCL1	100	80.347	ENSNLEG00000008891	RCL1	67	80.347	Nomascus_leucogenys
ENSCAPG00000013575	RCL1	89	78.261	ENSMEUG00000007653	RCL1	60	78.261	Notamacropus_eugenii
ENSCAPG00000013575	RCL1	100	79.191	ENSOPRG00000010965	RCL1	68	79.191	Ochotona_princeps
ENSCAPG00000013575	RCL1	100	76.190	ENSODEG00000004151	RCL1	72	76.190	Octodon_degus
ENSCAPG00000013575	RCL1	100	66.049	ENSONIG00000003871	rcl1	66	66.049	Oreochromis_niloticus
ENSCAPG00000013575	RCL1	66	79.487	ENSOANG00000013193	-	64	79.487	Ornithorhynchus_anatinus
ENSCAPG00000013575	RCL1	100	79.769	ENSOCUG00000008161	RCL1	68	79.769	Oryctolagus_cuniculus
ENSCAPG00000013575	RCL1	100	65.896	ENSORLG00000010443	rcl1	69	65.896	Oryzias_latipes
ENSCAPG00000013575	RCL1	100	65.896	ENSORLG00020012211	rcl1	69	65.896	Oryzias_latipes_hni
ENSCAPG00000013575	RCL1	100	65.318	ENSORLG00015001122	rcl1	69	65.318	Oryzias_latipes_hsok
ENSCAPG00000013575	RCL1	100	66.474	ENSOMEG00000022976	rcl1	60	66.474	Oryzias_melastigma
ENSCAPG00000013575	RCL1	100	78.613	ENSOGAG00000007480	RCL1	68	78.613	Otolemur_garnettii
ENSCAPG00000013575	RCL1	100	78.613	ENSOARG00000013463	RCL1	68	78.613	Ovis_aries
ENSCAPG00000013575	RCL1	100	80.925	ENSPPAG00000037958	RCL1	68	80.925	Pan_paniscus
ENSCAPG00000013575	RCL1	99	80.233	ENSPPRG00000022645	RCL1	68	80.233	Panthera_pardus
ENSCAPG00000013575	RCL1	99	80.233	ENSPTIG00000019031	RCL1	68	80.233	Panthera_tigris_altaica
ENSCAPG00000013575	RCL1	100	80.347	ENSPTRG00000020743	RCL1	68	80.347	Pan_troglodytes
ENSCAPG00000013575	RCL1	100	80.925	ENSPANG00000025151	RCL1	68	80.925	Papio_anubis
ENSCAPG00000013575	RCL1	100	64.740	ENSPKIG00000021022	rcl1	69	64.740	Paramormyrops_kingsleyae
ENSCAPG00000013575	RCL1	100	73.410	ENSPSIG00000012302	RCL1	77	73.410	Pelodiscus_sinensis
ENSCAPG00000013575	RCL1	100	64.815	ENSPMGG00000024007	rcl1	66	64.815	Periophthalmus_magnuspinnatus
ENSCAPG00000013575	RCL1	100	80.925	ENSPEMG00000023275	Rcl1	68	80.925	Peromyscus_maniculatus_bairdii
ENSCAPG00000013575	RCL1	100	80.864	ENSPCIG00000000188	RCL1	70	80.864	Phascolarctos_cinereus
ENSCAPG00000013575	RCL1	100	69.753	ENSPFOG00000019682	rcl1	66	69.753	Poecilia_formosa
ENSCAPG00000013575	RCL1	100	69.753	ENSPLAG00000022354	rcl1	66	69.753	Poecilia_latipinna
ENSCAPG00000013575	RCL1	100	69.753	ENSPMEG00000008131	rcl1	66	69.753	Poecilia_mexicana
ENSCAPG00000013575	RCL1	100	69.753	ENSPREG00000008032	rcl1	66	69.753	Poecilia_reticulata
ENSCAPG00000013575	RCL1	100	80.925	ENSPPYG00000019244	RCL1	68	80.925	Pongo_abelii
ENSCAPG00000013575	RCL1	99	76.190	ENSPCAG00000001440	RCL1	67	76.190	Procavia_capensis
ENSCAPG00000013575	RCL1	100	81.503	ENSPCOG00000009611	RCL1	68	81.503	Propithecus_coquereli
ENSCAPG00000013575	RCL1	100	81.977	ENSPVAG00000015752	RCL1	68	81.977	Pteropus_vampyrus
ENSCAPG00000013575	RCL1	100	66.667	ENSPNYG00000012910	rcl1	66	66.667	Pundamilia_nyererei
ENSCAPG00000013575	RCL1	100	64.740	ENSPNAG00000028307	rcl1	63	64.740	Pygocentrus_nattereri
ENSCAPG00000013575	RCL1	100	81.657	ENSRNOG00000015491	Rcl1	67	81.657	Rattus_norvegicus
ENSCAPG00000013575	RCL1	100	80.925	ENSRBIG00000035818	RCL1	68	80.925	Rhinopithecus_bieti
ENSCAPG00000013575	RCL1	100	80.925	ENSRROG00000029781	RCL1	68	80.925	Rhinopithecus_roxellana
ENSCAPG00000013575	RCL1	100	79.769	ENSSBOG00000026369	RCL1	68	79.769	Saimiri_boliviensis_boliviensis
ENSCAPG00000013575	RCL1	100	79.630	ENSSHAG00000014086	RCL1	75	79.630	Sarcophilus_harrisii
ENSCAPG00000013575	RCL1	100	65.318	ENSSFOG00015023020	rcl1	69	65.318	Scleropages_formosus
ENSCAPG00000013575	RCL1	100	65.896	ENSSMAG00000019751	rcl1	59	65.896	Scophthalmus_maximus
ENSCAPG00000013575	RCL1	100	69.136	ENSSDUG00000006349	rcl1	66	69.136	Seriola_dumerili
ENSCAPG00000013575	RCL1	100	65.537	ENSSLDG00000022076	rcl1	70	65.537	Seriola_lalandi_dorsalis
ENSCAPG00000013575	RCL1	100	83.333	ENSSARG00000009260	RCL1	66	83.333	Sorex_araneus
ENSCAPG00000013575	RCL1	100	70.520	ENSSPUG00000016330	RCL1	68	70.520	Sphenodon_punctatus
ENSCAPG00000013575	RCL1	100	67.232	ENSSPAG00000018038	rcl1	70	67.232	Stegastes_partitus
ENSCAPG00000013575	RCL1	100	79.769	ENSSSCG00000005217	RCL1	56	79.769	Sus_scrofa
ENSCAPG00000013575	RCL1	100	74.691	ENSTGUG00000005138	RCL1	66	74.691	Taeniopygia_guttata
ENSCAPG00000013575	RCL1	100	67.901	ENSTRUG00000010493	rcl1	66	67.901	Takifugu_rubripes
ENSCAPG00000013575	RCL1	100	67.284	ENSTNIG00000013214	rcl1	66	67.284	Tetraodon_nigroviridis
ENSCAPG00000013575	RCL1	100	77.381	ENSTBEG00000016339	RCL1	68	77.381	Tupaia_belangeri
ENSCAPG00000013575	RCL1	100	80.347	ENSTTRG00000016525	RCL1	68	80.347	Tursiops_truncatus
ENSCAPG00000013575	RCL1	100	79.191	ENSUAMG00000005598	RCL1	68	79.191	Ursus_americanus
ENSCAPG00000013575	RCL1	100	79.191	ENSUMAG00000017890	RCL1	76	79.191	Ursus_maritimus
ENSCAPG00000013575	RCL1	100	80.925	ENSVPAG00000009188	RCL1	78	80.925	Vicugna_pacos
ENSCAPG00000013575	RCL1	100	79.191	ENSVVUG00000007304	RCL1	69	79.191	Vulpes_vulpes
ENSCAPG00000013575	RCL1	100	67.232	ENSXETG00000000592	rcl1	69	67.232	Xenopus_tropicalis
ENSCAPG00000013575	RCL1	100	69.753	ENSXCOG00000004922	rcl1	66	69.753	Xiphophorus_couchianus
ENSCAPG00000013575	RCL1	100	69.753	ENSXMAG00000022366	RCL1	66	69.753	Xiphophorus_maculatus