EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000013584 (Gene tree)
Gene ID: -
Gene Symbol: CMSS1
Alias: C3orf26|MGC4308
Full Name: cms1 ribosomal small subunit homolog
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 19685 bases
Position: chrAVPZ01000289.1:1964676-1984360
Accession: 28666
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000012818	CMS1	PF14617.6	2.5e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000016574	CMSS1-201	627	-	ENSCAPP00000012818	208 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000013584's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000013584's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000013584	CMSS1	100	72.807	ENSG00000184220	CMSS1	98	92.500	Homo_sapiens
ENSCAPG00000013584	CMSS1	88	56.085	ENSAPOG00000010604	cmss1	77	56.085	Acanthochromis_polyacanthus
ENSCAPG00000013584	CMSS1	100	72.174	ENSAMEG00000004092	CMSS1	86	72.609	Ailuropoda_melanoleuca
ENSCAPG00000013584	CMSS1	87	47.312	ENSACIG00000021854	cmss1	68	47.312	Amphilophus_citrinellus
ENSCAPG00000013584	CMSS1	88	56.614	ENSAOCG00000013361	cmss1	65	56.614	Amphiprion_ocellaris
ENSCAPG00000013584	CMSS1	88	56.614	ENSAPEG00000005829	cmss1	65	56.614	Amphiprion_percula
ENSCAPG00000013584	CMSS1	87	56.989	ENSATEG00000008209	cmss1	68	56.989	Anabas_testudineus
ENSCAPG00000013584	CMSS1	87	62.903	ENSAPLG00000010542	CMSS1	97	58.036	Anas_platyrhynchos
ENSCAPG00000013584	CMSS1	88	60.963	ENSACAG00000011065	CMSS1	68	60.963	Anolis_carolinensis
ENSCAPG00000013584	CMSS1	100	71.179	ENSANAG00000023565	CMSS1	85	75.000	Aotus_nancymaae
ENSCAPG00000013584	CMSS1	87	53.763	ENSACLG00000027294	cmss1	64	53.763	Astatotilapia_calliptera
ENSCAPG00000013584	CMSS1	88	50.265	ENSAMXG00000002046	cmss1	74	47.005	Astyanax_mexicanus
ENSCAPG00000013584	CMSS1	100	70.306	ENSBTAG00000013663	CMSS1	81	70.742	Bos_taurus
ENSCAPG00000013584	CMSS1	87	78.534	ENSCJAG00000000610	CMSS1	85	71.491	Callithrix_jacchus
ENSCAPG00000013584	CMSS1	100	71.616	ENSCAFG00000009230	CMSS1	81	72.052	Canis_familiaris
ENSCAPG00000013584	CMSS1	100	71.616	ENSCAFG00020009464	-	81	72.052	Canis_lupus_dingo
ENSCAPG00000013584	CMSS1	87	72.917	ENSCAFG00020024156	-	68	67.117	Canis_lupus_dingo
ENSCAPG00000013584	CMSS1	100	71.179	ENSCHIG00000013003	CMSS1	81	71.616	Capra_hircus
ENSCAPG00000013584	CMSS1	100	66.239	ENSTSYG00000009266	CMSS1	86	69.869	Carlito_syrichta
ENSCAPG00000013584	CMSS1	100	81.223	ENSCPOG00000014680	CMSS1	80	80.349	Cavia_porcellus
ENSCAPG00000013584	CMSS1	100	68.803	ENSCCAG00000034685	CMSS1	85	72.489	Cebus_capucinus
ENSCAPG00000013584	CMSS1	100	74.236	ENSCATG00000031980	CMSS1	85	73.799	Cercocebus_atys
ENSCAPG00000013584	CMSS1	100	71.368	ENSCLAG00000011241	CMSS1	96	75.546	Chinchilla_lanigera
ENSCAPG00000013584	CMSS1	100	73.362	ENSCSAG00000006024	CMSS1	91	73.799	Chlorocebus_sabaeus
ENSCAPG00000013584	CMSS1	87	65.054	ENSCHOG00000012098	CMSS1	81	61.435	Choloepus_hoffmanni
ENSCAPG00000013584	CMSS1	88	38.071	ENSCING00000014848	-	100	38.542	Ciona_intestinalis
ENSCAPG00000013584	CMSS1	58	36.220	ENSCSAVG00000002309	-	99	36.220	Ciona_savignyi
ENSCAPG00000013584	CMSS1	87	80.208	ENSCANG00000031337	CMSS1	85	73.362	Colobus_angolensis_palliatus
ENSCAPG00000013584	CMSS1	88	74.872	ENSCGRG00001014305	Cmss1	80	69.432	Cricetulus_griseus_chok1gshd
ENSCAPG00000013584	CMSS1	100	68.261	ENSCGRG00000006722	Cmss1	87	69.869	Cricetulus_griseus_crigri
ENSCAPG00000013584	CMSS1	87	53.927	ENSCSEG00000004958	cmss1	71	51.185	Cynoglossus_semilaevis
ENSCAPG00000013584	CMSS1	88	54.497	ENSCVAG00000005039	cmss1	66	54.497	Cyprinodon_variegatus
ENSCAPG00000013584	CMSS1	87	49.462	ENSDARG00000112579	cmss1	72	46.667	Danio_rerio
ENSCAPG00000013584	CMSS1	100	69.432	ENSDNOG00000040418	CMSS1	81	71.616	Dasypus_novemcinctus
ENSCAPG00000013584	CMSS1	100	71.616	ENSDORG00000010461	Cmss1	80	71.179	Dipodomys_ordii
ENSCAPG00000013584	CMSS1	61	41.667	ENSEBUG00000002156	-	96	41.667	Eptatretus_burgeri
ENSCAPG00000013584	CMSS1	100	72.052	ENSEASG00005010966	CMSS1	99	71.111	Equus_asinus_asinus
ENSCAPG00000013584	CMSS1	100	72.052	ENSECAG00000015662	CMSS1	98	71.616	Equus_caballus
ENSCAPG00000013584	CMSS1	58	78.261	ENSEEUG00000007624	-	54	68.919	Erinaceus_europaeus
ENSCAPG00000013584	CMSS1	88	54.011	ENSELUG00000019459	cmss1	74	49.550	Esox_lucius
ENSCAPG00000013584	CMSS1	100	73.799	ENSFCAG00000044577	CMSS1	80	73.362	Felis_catus
ENSCAPG00000013584	CMSS1	87	61.290	ENSFALG00000005816	CMSS1	94	56.951	Ficedula_albicollis
ENSCAPG00000013584	CMSS1	100	74.672	ENSFDAG00000012577	CMSS1	98	74.672	Fukomys_damarensis
ENSCAPG00000013584	CMSS1	88	53.927	ENSFHEG00000012008	cmss1	86	50.943	Fundulus_heteroclitus
ENSCAPG00000013584	CMSS1	87	55.914	ENSGMOG00000016729	cmss1	75	53.333	Gadus_morhua
ENSCAPG00000013584	CMSS1	87	62.903	ENSGALG00000015267	CMSS1	85	58.296	Gallus_gallus
ENSCAPG00000013584	CMSS1	87	55.914	ENSGAFG00000021217	cmss1	70	55.914	Gambusia_affinis
ENSCAPG00000013584	CMSS1	88	49.733	ENSGACG00000002798	cmss1	77	46.296	Gasterosteus_aculeatus
ENSCAPG00000013584	CMSS1	87	64.516	ENSGAGG00000019861	CMSS1	87	58.744	Gopherus_agassizii
ENSCAPG00000013584	CMSS1	100	72.368	ENSGGOG00000014125	CMSS1	85	72.807	Gorilla_gorilla
ENSCAPG00000013584	CMSS1	87	53.763	ENSHBUG00000008431	cmss1	72	49.761	Haplochromis_burtoni
ENSCAPG00000013584	CMSS1	100	71.368	ENSHGLG00000019481	CMSS1	91	75.983	Heterocephalus_glaber_female
ENSCAPG00000013584	CMSS1	100	71.368	ENSHGLG00100010314	CMSS1	90	75.983	Heterocephalus_glaber_male
ENSCAPG00000013584	CMSS1	87	58.065	ENSHCOG00000003222	cmss1	74	52.511	Hippocampus_comes
ENSCAPG00000013584	CMSS1	88	48.969	ENSIPUG00000011591	cmss1	76	45.575	Ictalurus_punctatus
ENSCAPG00000013584	CMSS1	100	71.616	ENSSTOG00000019366	CMSS1	80	72.052	Ictidomys_tridecemlineatus
ENSCAPG00000013584	CMSS1	87	75.000	ENSJJAG00000014894	Cmss1	83	75.000	Jaculus_jaculus
ENSCAPG00000013584	CMSS1	87	46.774	ENSKMAG00000002390	cmss1	74	46.774	Kryptolebias_marmoratus
ENSCAPG00000013584	CMSS1	87	51.337	ENSLBEG00000006298	cmss1	76	51.337	Labrus_bergylta
ENSCAPG00000013584	CMSS1	87	60.753	ENSLACG00000009293	CMSS1	91	56.190	Latimeria_chalumnae
ENSCAPG00000013584	CMSS1	87	52.151	ENSLOCG00000009391	cmss1	77	46.789	Lepisosteus_oculatus
ENSCAPG00000013584	CMSS1	87	76.042	ENSLAFG00000017509	CMSS1	98	69.432	Loxodonta_africana
ENSCAPG00000013584	CMSS1	100	73.799	ENSMFAG00000045006	CMSS1	85	73.362	Macaca_fascicularis
ENSCAPG00000013584	CMSS1	100	73.362	ENSMMUG00000002939	CMSS1	95	71.689	Macaca_mulatta
ENSCAPG00000013584	CMSS1	100	73.362	ENSMNEG00000031315	CMSS1	85	72.926	Macaca_nemestrina
ENSCAPG00000013584	CMSS1	100	73.684	ENSMLEG00000033660	CMSS1	85	73.246	Mandrillus_leucophaeus
ENSCAPG00000013584	CMSS1	88	55.556	ENSMAMG00000017176	cmss1	72	52.381	Mastacembelus_armatus
ENSCAPG00000013584	CMSS1	87	53.763	ENSMZEG00005021886	cmss1	64	53.763	Maylandia_zebra
ENSCAPG00000013584	CMSS1	87	62.903	ENSMGAG00000014360	CMSS1	82	62.903	Meleagris_gallopavo
ENSCAPG00000013584	CMSS1	50	66.667	ENSMAUG00000020609	Cmss1	75	45.872	Mesocricetus_auratus
ENSCAPG00000013584	CMSS1	100	68.376	ENSMICG00000048977	CMSS1	86	72.489	Microcebus_murinus
ENSCAPG00000013584	CMSS1	88	73.545	ENSMOCG00000021937	Cmss1	81	67.713	Microtus_ochrogaster
ENSCAPG00000013584	CMSS1	88	51.546	ENSMMOG00000019794	cmss1	90	47.297	Mola_mola
ENSCAPG00000013584	CMSS1	88	64.583	ENSMODG00000002275	CMSS1	84	59.649	Monodelphis_domestica
ENSCAPG00000013584	CMSS1	87	55.376	ENSMALG00000004250	cmss1	75	51.142	Monopterus_albus
ENSCAPG00000013584	CMSS1	88	73.333	MGP_CAROLIEiJ_G0020824	Cmss1	81	67.826	Mus_caroli
ENSCAPG00000013584	CMSS1	88	73.846	ENSMUSG00000022748	Cmss1	81	68.261	Mus_musculus
ENSCAPG00000013584	CMSS1	88	73.846	MGP_PahariEiJ_G0016524	Cmss1	81	67.826	Mus_pahari
ENSCAPG00000013584	CMSS1	88	73.846	MGP_SPRETEiJ_G0021724	Cmss1	81	68.261	Mus_spretus
ENSCAPG00000013584	CMSS1	99	74.561	ENSMPUG00000011324	CMSS1	86	74.123	Mustela_putorius_furo
ENSCAPG00000013584	CMSS1	100	73.593	ENSMLUG00000001131	CMSS1	86	73.160	Myotis_lucifugus
ENSCAPG00000013584	CMSS1	100	68.559	ENSNGAG00000020316	Cmss1	80	68.996	Nannospalax_galili
ENSCAPG00000013584	CMSS1	87	53.226	ENSNBRG00000003095	cmss1	64	53.226	Neolamprologus_brichardi
ENSCAPG00000013584	CMSS1	100	74.236	ENSNLEG00000034172	CMSS1	85	73.799	Nomascus_leucogenys
ENSCAPG00000013584	CMSS1	88	50.510	ENSMEUG00000014505	CMSS1	98	47.414	Notamacropus_eugenii
ENSCAPG00000013584	CMSS1	87	78.010	ENSOPRG00000002986	CMSS1	80	72.368	Ochotona_princeps
ENSCAPG00000013584	CMSS1	100	73.214	ENSODEG00000003558	-	82	73.214	Octodon_degus
ENSCAPG00000013584	CMSS1	100	74.107	ENSODEG00000005226	-	80	74.554	Octodon_degus
ENSCAPG00000013584	CMSS1	100	63.158	ENSODEG00000001853	-	79	63.158	Octodon_degus
ENSCAPG00000013584	CMSS1	87	71.658	ENSODEG00000009446	-	85	65.297	Octodon_degus
ENSCAPG00000013584	CMSS1	87	54.255	ENSONIG00000006678	cmss1	71	54.255	Oreochromis_niloticus
ENSCAPG00000013584	CMSS1	100	59.641	ENSOANG00000007529	CMSS1	97	59.471	Ornithorhynchus_anatinus
ENSCAPG00000013584	CMSS1	100	70.175	ENSOCUG00000025366	CMSS1	81	71.053	Oryctolagus_cuniculus
ENSCAPG00000013584	CMSS1	88	56.614	ENSORLG00000020340	cmss1	75	52.036	Oryzias_latipes
ENSCAPG00000013584	CMSS1	88	49.738	ENSORLG00020012235	cmss1	80	51.309	Oryzias_latipes_hni
ENSCAPG00000013584	CMSS1	88	51.852	ENSORLG00015015551	cmss1	70	51.852	Oryzias_latipes_hsok
ENSCAPG00000013584	CMSS1	88	56.085	ENSOMEG00000012555	cmss1	78	50.893	Oryzias_melastigma
ENSCAPG00000013584	CMSS1	100	71.616	ENSOGAG00000002045	CMSS1	98	72.052	Otolemur_garnettii
ENSCAPG00000013584	CMSS1	100	70.870	ENSOARG00000017899	CMSS1	77	71.304	Ovis_aries
ENSCAPG00000013584	CMSS1	100	72.368	ENSPPAG00000038515	CMSS1	82	72.807	Pan_paniscus
ENSCAPG00000013584	CMSS1	100	73.799	ENSPPRG00000016767	CMSS1	80	73.362	Panthera_pardus
ENSCAPG00000013584	CMSS1	100	73.362	ENSPTIG00000018274	CMSS1	80	72.926	Panthera_tigris_altaica
ENSCAPG00000013584	CMSS1	87	79.058	ENSPTRG00000015157	CMSS1	91	72.368	Pan_troglodytes
ENSCAPG00000013584	CMSS1	100	73.362	ENSPANG00000019980	CMSS1	89	73.799	Papio_anubis
ENSCAPG00000013584	CMSS1	87	56.989	ENSPKIG00000012609	cmss1	69	56.989	Paramormyrops_kingsleyae
ENSCAPG00000013584	CMSS1	87	66.667	ENSPSIG00000003849	CMSS1	97	60.090	Pelodiscus_sinensis
ENSCAPG00000013584	CMSS1	87	55.319	ENSPMGG00000010286	cmss1	80	55.319	Periophthalmus_magnuspinnatus
ENSCAPG00000013584	CMSS1	88	73.846	ENSPEMG00000016384	Cmss1	80	68.122	Peromyscus_maniculatus_bairdii
ENSCAPG00000013584	CMSS1	88	46.809	ENSPMAG00000001146	cmss1	92	46.809	Petromyzon_marinus
ENSCAPG00000013584	CMSS1	87	67.204	ENSPCIG00000015656	CMSS1	84	60.538	Phascolarctos_cinereus
ENSCAPG00000013584	CMSS1	87	56.989	ENSPFOG00000016849	cmss1	65	56.989	Poecilia_formosa
ENSCAPG00000013584	CMSS1	87	56.452	ENSPLAG00000008323	cmss1	65	56.452	Poecilia_latipinna
ENSCAPG00000013584	CMSS1	88	56.614	ENSPMEG00000021020	cmss1	78	51.556	Poecilia_mexicana
ENSCAPG00000013584	CMSS1	87	55.914	ENSPREG00000007618	cmss1	74	49.541	Poecilia_reticulata
ENSCAPG00000013584	CMSS1	100	72.489	ENSPPYG00000013606	CMSS1	82	72.052	Pongo_abelii
ENSCAPG00000013584	CMSS1	100	69.231	ENSPCOG00000020035	CMSS1	86	73.362	Propithecus_coquereli
ENSCAPG00000013584	CMSS1	100	58.952	ENSPVAG00000017031	CMSS1	80	58.515	Pteropus_vampyrus
ENSCAPG00000013584	CMSS1	75	54.375	ENSPNYG00000013428	cmss1	59	54.375	Pundamilia_nyererei
ENSCAPG00000013584	CMSS1	88	50.802	ENSPNAG00000007912	cmss1	73	47.442	Pygocentrus_nattereri
ENSCAPG00000013584	CMSS1	88	73.333	ENSRNOG00000027888	Cmss1	87	67.391	Rattus_norvegicus
ENSCAPG00000013584	CMSS1	100	73.799	ENSRBIG00000037931	CMSS1	85	73.362	Rhinopithecus_bieti
ENSCAPG00000013584	CMSS1	100	73.799	ENSRROG00000042910	CMSS1	85	73.362	Rhinopithecus_roxellana
ENSCAPG00000013584	CMSS1	87	78.646	ENSSBOG00000030980	CMSS1	85	71.930	Saimiri_boliviensis_boliviensis
ENSCAPG00000013584	CMSS1	88	65.608	ENSSHAG00000009321	CMSS1	88	60.987	Sarcophilus_harrisii
ENSCAPG00000013584	CMSS1	87	55.914	ENSSFOG00015001509	cmss1	64	55.914	Scleropages_formosus
ENSCAPG00000013584	CMSS1	87	52.880	ENSSMAG00000001653	cmss1	64	52.880	Scophthalmus_maximus
ENSCAPG00000013584	CMSS1	88	56.085	ENSSDUG00000007719	cmss1	73	52.857	Seriola_dumerili
ENSCAPG00000013584	CMSS1	87	56.989	ENSSLDG00000012300	cmss1	63	56.989	Seriola_lalandi_dorsalis
ENSCAPG00000013584	CMSS1	88	59.596	ENSSARG00000003584	CMSS1	80	57.759	Sorex_araneus
ENSCAPG00000013584	CMSS1	88	63.298	ENSSPUG00000003865	CMSS1	99	57.399	Sphenodon_punctatus
ENSCAPG00000013584	CMSS1	87	55.914	ENSSPAG00000019182	cmss1	58	55.914	Stegastes_partitus
ENSCAPG00000013584	CMSS1	100	74.236	ENSSSCG00000011970	CMSS1	80	73.799	Sus_scrofa
ENSCAPG00000013584	CMSS1	87	62.366	ENSTGUG00000013635	CMSS1	97	57.399	Taeniopygia_guttata
ENSCAPG00000013584	CMSS1	88	54.497	ENSTRUG00000015265	cmss1	67	54.497	Takifugu_rubripes
ENSCAPG00000013584	CMSS1	88	49.735	ENSTNIG00000002880	cmss1	76	46.411	Tetraodon_nigroviridis
ENSCAPG00000013584	CMSS1	100	49.782	ENSTBEG00000016722	CMSS1	80	49.782	Tupaia_belangeri
ENSCAPG00000013584	CMSS1	100	70.044	ENSTTRG00000001562	CMSS1	80	70.044	Tursiops_truncatus
ENSCAPG00000013584	CMSS1	100	72.926	ENSUAMG00000024209	CMSS1	100	73.362	Ursus_americanus
ENSCAPG00000013584	CMSS1	100	72.926	ENSUMAG00000001983	CMSS1	86	73.362	Ursus_maritimus
ENSCAPG00000013584	CMSS1	100	62.445	ENSVPAG00000000263	CMSS1	80	62.445	Vicugna_pacos
ENSCAPG00000013584	CMSS1	100	68.376	ENSVVUG00000021647	-	91	72.489	Vulpes_vulpes
ENSCAPG00000013584	CMSS1	87	77.604	ENSVVUG00000007776	-	85	71.171	Vulpes_vulpes
ENSCAPG00000013584	CMSS1	88	55.670	ENSXETG00000011858	cmss1	80	50.220	Xenopus_tropicalis
ENSCAPG00000013584	CMSS1	87	55.914	ENSXCOG00000018724	cmss1	64	55.914	Xiphophorus_couchianus
ENSCAPG00000013584	CMSS1	87	55.914	ENSXMAG00000011243	cmss1	70	55.914	Xiphophorus_maculatus