EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000013586 (Gene tree)
Gene ID: -
Gene Symbol: SRRT
Alias: ARS2|Asr2|serrate
Full Name: serrate%2C RNA effector molecule
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Minus strand
Length: 7557 bases
Position: chrAVPZ01000234.1:3146779-3154335
Accession: 24101
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000012832	ARS2	PF04959.13	1.5e-91	1	1
ENSCAPP00000012836	ARS2	PF04959.13	3.4e-91	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000016589	SRRT-201	2472	-	ENSCAPP00000012832	823 (aa)	-	-
ENSCAPT00000016594	SRRT-202	1563	-	ENSCAPP00000012836	520 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000013586's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000013586's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000013586	SRRT	100	96.992	ENSG00000087087	SRRT	99	100.000	Homo_sapiens
ENSCAPG00000013586	SRRT	89	71.730	ENSAPOG00000002304	srrt	51	76.703	Acanthochromis_polyacanthus
ENSCAPG00000013586	SRRT	100	94.805	ENSAMEG00000014506	SRRT	95	94.805	Ailuropoda_melanoleuca
ENSCAPG00000013586	SRRT	89	71.519	ENSACIG00000015795	srrt	88	76.484	Amphilophus_citrinellus
ENSCAPG00000013586	SRRT	93	58.800	ENSAOCG00000009189	-	94	56.377	Amphiprion_ocellaris
ENSCAPG00000013586	SRRT	88	76.923	ENSAOCG00000009693	srrt	86	76.923	Amphiprion_ocellaris
ENSCAPG00000013586	SRRT	88	76.484	ENSAPEG00000003646	srrt	87	76.484	Amphiprion_percula
ENSCAPG00000013586	SRRT	93	58.800	ENSAPEG00000020016	-	94	56.377	Amphiprion_percula
ENSCAPG00000013586	SRRT	88	74.286	ENSATEG00000014425	srrt	86	75.385	Anabas_testudineus
ENSCAPG00000013586	SRRT	94	57.480	ENSATEG00000003652	-	85	65.245	Anabas_testudineus
ENSCAPG00000013586	SRRT	99	77.071	ENSACAG00000001014	SRRT	95	75.779	Anolis_carolinensis
ENSCAPG00000013586	SRRT	100	95.928	ENSANAG00000031718	SRRT	95	95.928	Aotus_nancymaae
ENSCAPG00000013586	SRRT	94	57.800	ENSACLG00000009423	-	52	64.795	Astatotilapia_calliptera
ENSCAPG00000013586	SRRT	89	70.253	ENSACLG00000013156	srrt	50	75.165	Astatotilapia_calliptera
ENSCAPG00000013586	SRRT	88	71.121	ENSAMXG00000016671	srrt	50	76.667	Astyanax_mexicanus
ENSCAPG00000013586	SRRT	100	94.371	ENSBTAG00000001134	SRRT	95	94.132	Bos_taurus
ENSCAPG00000013586	SRRT	77	42.227	WBGene00017085	E01A2.2	83	48.438	Caenorhabditis_elegans
ENSCAPG00000013586	SRRT	100	95.689	ENSCJAG00000014917	SRRT	95	95.689	Callithrix_jacchus
ENSCAPG00000013586	SRRT	100	96.168	ENSCAFG00000023538	SRRT	95	96.168	Canis_familiaris
ENSCAPG00000013586	SRRT	100	96.751	ENSCAFG00020013358	SRRT	99	93.276	Canis_lupus_dingo
ENSCAPG00000013586	SRRT	100	95.909	ENSCHIG00000010495	SRRT	95	95.909	Capra_hircus
ENSCAPG00000013586	SRRT	100	93.261	ENSTSYG00000036426	SRRT	99	93.261	Carlito_syrichta
ENSCAPG00000013586	SRRT	100	97.847	ENSCPOG00000001739	SRRT	95	97.847	Cavia_porcellus
ENSCAPG00000013586	SRRT	100	95.928	ENSCCAG00000015877	SRRT	95	95.928	Cebus_capucinus
ENSCAPG00000013586	SRRT	100	96.390	ENSCATG00000036306	SRRT	97	94.899	Cercocebus_atys
ENSCAPG00000013586	SRRT	100	97.126	ENSCLAG00000007568	SRRT	100	94.264	Chinchilla_lanigera
ENSCAPG00000013586	SRRT	100	96.048	ENSCSAG00000017996	SRRT	95	96.048	Chlorocebus_sabaeus
ENSCAPG00000013586	SRRT	59	94.083	ENSCHOG00000007815	SRRT	67	94.083	Choloepus_hoffmanni
ENSCAPG00000013586	SRRT	78	81.609	ENSCPBG00000011553	SRRT	82	81.679	Chrysemys_picta_bellii
ENSCAPG00000013586	SRRT	100	46.593	ENSCING00000003506	-	54	51.464	Ciona_intestinalis
ENSCAPG00000013586	SRRT	99	45.489	ENSCSAVG00000008394	-	85	53.760	Ciona_savignyi
ENSCAPG00000013586	SRRT	100	96.510	ENSCANG00000034556	SRRT	95	96.510	Colobus_angolensis_palliatus
ENSCAPG00000013586	SRRT	100	94.856	ENSCGRG00001001594	Srrt	95	94.856	Cricetulus_griseus_chok1gshd
ENSCAPG00000013586	SRRT	100	91.729	ENSCGRG00000007292	Srrt	90	93.869	Cricetulus_griseus_crigri
ENSCAPG00000013586	SRRT	89	66.381	ENSCSEG00000017878	srrt	50	68.122	Cynoglossus_semilaevis
ENSCAPG00000013586	SRRT	94	56.574	ENSCSEG00000005233	-	84	63.147	Cynoglossus_semilaevis
ENSCAPG00000013586	SRRT	99	64.734	ENSCVAG00000019848	srrt	54	75.604	Cyprinodon_variegatus
ENSCAPG00000013586	SRRT	94	55.627	ENSCVAG00000017344	-	51	63.657	Cyprinodon_variegatus
ENSCAPG00000013586	SRRT	89	71.550	ENSDARG00000017762	srrt	51	78.509	Danio_rerio
ENSCAPG00000013586	SRRT	100	95.928	ENSDNOG00000003851	SRRT	95	95.928	Dasypus_novemcinctus
ENSCAPG00000013586	SRRT	100	94.578	ENSDORG00000005584	Srrt	95	95.301	Dipodomys_ordii
ENSCAPG00000013586	SRRT	89	50.000	FBgn0033062	Ars2	68	54.077	Drosophila_melanogaster
ENSCAPG00000013586	SRRT	91	90.554	ENSETEG00000016175	SRRT	82	92.857	Echinops_telfairi
ENSCAPG00000013586	SRRT	89	58.774	ENSEBUG00000008517	-	77	62.179	Eptatretus_burgeri
ENSCAPG00000013586	SRRT	100	95.808	ENSEASG00005016956	SRRT	95	95.808	Equus_asinus_asinus
ENSCAPG00000013586	SRRT	100	95.928	ENSECAG00000012292	SRRT	95	95.928	Equus_caballus
ENSCAPG00000013586	SRRT	84	98.901	ENSEEUG00000009117	SRRT	81	98.901	Erinaceus_europaeus
ENSCAPG00000013586	SRRT	100	65.212	ENSELUG00000006651	srrt	50	70.711	Esox_lucius
ENSCAPG00000013586	SRRT	97	56.057	ENSELUG00000021216	-	53	65.042	Esox_lucius
ENSCAPG00000013586	SRRT	100	96.168	ENSFCAG00000006855	SRRT	95	96.168	Felis_catus
ENSCAPG00000013586	SRRT	60	53.642	ENSFALG00000007524	-	84	70.455	Ficedula_albicollis
ENSCAPG00000013586	SRRT	100	94.782	ENSFDAG00000021347	SRRT	95	94.782	Fukomys_damarensis
ENSCAPG00000013586	SRRT	93	55.285	ENSFHEG00000004105	-	93	56.897	Fundulus_heteroclitus
ENSCAPG00000013586	SRRT	91	67.653	ENSFHEG00000002756	srrt	88	75.735	Fundulus_heteroclitus
ENSCAPG00000013586	SRRT	100	60.956	ENSGMOG00000018619	srrt	51	71.179	Gadus_morhua
ENSCAPG00000013586	SRRT	87	58.747	ENSGMOG00000018694	-	82	64.080	Gadus_morhua
ENSCAPG00000013586	SRRT	89	70.464	ENSGAFG00000005423	srrt	51	75.604	Gambusia_affinis
ENSCAPG00000013586	SRRT	97	54.512	ENSGAFG00000020383	-	54	62.121	Gambusia_affinis
ENSCAPG00000013586	SRRT	93	55.533	ENSGACG00000001100	-	53	62.232	Gasterosteus_aculeatus
ENSCAPG00000013586	SRRT	100	63.711	ENSGACG00000020387	srrt	51	75.328	Gasterosteus_aculeatus
ENSCAPG00000013586	SRRT	100	96.992	ENSGGOG00000001508	SRRT	96	96.992	Gorilla_gorilla
ENSCAPG00000013586	SRRT	89	70.464	ENSHBUG00000002942	srrt	50	75.385	Haplochromis_burtoni
ENSCAPG00000013586	SRRT	100	96.535	ENSHGLG00000008344	Srrt	95	96.535	Heterocephalus_glaber_female
ENSCAPG00000013586	SRRT	100	97.473	ENSHGLG00100018857	Srrt	95	97.473	Heterocephalus_glaber_male
ENSCAPG00000013586	SRRT	97	52.363	ENSHCOG00000008904	-	56	61.388	Hippocampus_comes
ENSCAPG00000013586	SRRT	100	62.813	ENSHCOG00000005403	srrt	95	61.905	Hippocampus_comes
ENSCAPG00000013586	SRRT	89	70.378	ENSIPUG00000021150	srrt	51	77.243	Ictalurus_punctatus
ENSCAPG00000013586	SRRT	100	96.751	ENSSTOG00000013776	SRRT	95	96.751	Ictidomys_tridecemlineatus
ENSCAPG00000013586	SRRT	100	96.476	ENSJJAG00000010446	Srrt	95	96.476	Jaculus_jaculus
ENSCAPG00000013586	SRRT	94	56.286	ENSKMAG00000008468	-	53	63.025	Kryptolebias_marmoratus
ENSCAPG00000013586	SRRT	99	65.217	ENSKMAG00000013599	srrt	54	75.385	Kryptolebias_marmoratus
ENSCAPG00000013586	SRRT	100	65.426	ENSLBEG00000016308	srrt	54	76.139	Labrus_bergylta
ENSCAPG00000013586	SRRT	99	63.713	ENSLACG00000001089	SRRT	95	63.550	Latimeria_chalumnae
ENSCAPG00000013586	SRRT	95	61.111	ENSLOCG00000013658	srrt	52	70.330	Lepisosteus_oculatus
ENSCAPG00000013586	SRRT	100	95.923	ENSLAFG00000007725	SRRT	95	95.923	Loxodonta_africana
ENSCAPG00000013586	SRRT	100	96.631	ENSMFAG00000033745	SRRT	99	95.136	Macaca_fascicularis
ENSCAPG00000013586	SRRT	100	96.048	ENSMMUG00000021255	SRRT	95	96.048	Macaca_mulatta
ENSCAPG00000013586	SRRT	100	96.048	ENSMNEG00000041864	SRRT	97	95.136	Macaca_nemestrina
ENSCAPG00000013586	SRRT	100	96.631	ENSMLEG00000029479	SRRT	98	95.136	Mandrillus_leucophaeus
ENSCAPG00000013586	SRRT	94	58.135	ENSMAMG00000010681	-	70	66.247	Mastacembelus_armatus
ENSCAPG00000013586	SRRT	89	69.198	ENSMAMG00000014311	srrt	95	65.762	Mastacembelus_armatus
ENSCAPG00000013586	SRRT	94	57.800	ENSMZEG00005028002	-	52	64.795	Maylandia_zebra
ENSCAPG00000013586	SRRT	89	70.253	ENSMZEG00005016135	srrt	50	75.165	Maylandia_zebra
ENSCAPG00000013586	SRRT	100	94.604	ENSMAUG00000011386	Srrt	95	94.604	Mesocricetus_auratus
ENSCAPG00000013586	SRRT	100	96.048	ENSMICG00000009471	SRRT	98	95.136	Microcebus_murinus
ENSCAPG00000013586	SRRT	100	94.604	ENSMOCG00000001971	Srrt	95	94.604	Microtus_ochrogaster
ENSCAPG00000013586	SRRT	89	61.715	ENSMMOG00000011137	-	55	65.727	Mola_mola
ENSCAPG00000013586	SRRT	99	65.030	ENSMMOG00000016399	srrt	54	75.546	Mola_mola
ENSCAPG00000013586	SRRT	90	84.568	ENSMODG00000004862	SRRT	90	90.084	Monodelphis_domestica
ENSCAPG00000013586	SRRT	99	49.806	ENSMALG00000005567	-	84	53.744	Monopterus_albus
ENSCAPG00000013586	SRRT	95	62.005	ENSMALG00000018604	srrt	53	71.806	Monopterus_albus
ENSCAPG00000013586	SRRT	100	96.233	MGP_CAROLIEiJ_G0027870	Srrt	100	97.426	Mus_caroli
ENSCAPG00000013586	SRRT	100	96.233	ENSMUSG00000037364	Srrt	99	97.426	Mus_musculus
ENSCAPG00000013586	SRRT	100	96.233	MGP_PahariEiJ_G0024456	Srrt	100	97.059	Mus_pahari
ENSCAPG00000013586	SRRT	100	96.233	MGP_SPRETEiJ_G0028875	Srrt	100	97.426	Mus_spretus
ENSCAPG00000013586	SRRT	100	96.048	ENSMPUG00000015839	SRRT	95	96.048	Mustela_putorius_furo
ENSCAPG00000013586	SRRT	100	95.449	ENSMLUG00000009975	SRRT	95	95.449	Myotis_lucifugus
ENSCAPG00000013586	SRRT	100	95.204	ENSNGAG00000023715	Srrt	100	94.635	Nannospalax_galili
ENSCAPG00000013586	SRRT	89	69.133	ENSNBRG00000019100	srrt	95	63.227	Neolamprologus_brichardi
ENSCAPG00000013586	SRRT	99	85.248	ENSNLEG00000011987	SRRT	99	84.597	Nomascus_leucogenys
ENSCAPG00000013586	SRRT	99	74.455	ENSMEUG00000011941	SRRT	94	73.665	Notamacropus_eugenii
ENSCAPG00000013586	SRRT	80	88.702	ENSOPRG00000002502	-	67	100.000	Ochotona_princeps
ENSCAPG00000013586	SRRT	100	98.663	ENSODEG00000016856	SRRT	95	98.663	Octodon_degus
ENSCAPG00000013586	SRRT	94	57.426	ENSONIG00000016080	-	52	64.516	Oreochromis_niloticus
ENSCAPG00000013586	SRRT	89	70.675	ENSONIG00000004242	srrt	52	74.675	Oreochromis_niloticus
ENSCAPG00000013586	SRRT	100	65.845	ENSORLG00000008120	srrt	52	74.945	Oryzias_latipes
ENSCAPG00000013586	SRRT	100	65.842	ENSORLG00020003058	srrt	95	64.497	Oryzias_latipes_hni
ENSCAPG00000013586	SRRT	100	65.845	ENSORLG00015008062	srrt	95	64.497	Oryzias_latipes_hsok
ENSCAPG00000013586	SRRT	100	66.156	ENSOMEG00000003155	srrt	91	75.165	Oryzias_melastigma
ENSCAPG00000013586	SRRT	97	56.366	ENSOMEG00000006963	-	53	65.293	Oryzias_melastigma
ENSCAPG00000013586	SRRT	100	96.287	ENSOGAG00000017242	SRRT	95	96.287	Otolemur_garnettii
ENSCAPG00000013586	SRRT	100	95.909	ENSOARG00000015645	SRRT	95	95.909	Ovis_aries
ENSCAPG00000013586	SRRT	100	96.871	ENSPPAG00000041090	SRRT	95	96.871	Pan_paniscus
ENSCAPG00000013586	SRRT	100	96.149	ENSPPRG00000009557	SRRT	95	96.149	Panthera_pardus
ENSCAPG00000013586	SRRT	100	96.048	ENSPTIG00000014355	SRRT	95	96.048	Panthera_tigris_altaica
ENSCAPG00000013586	SRRT	100	96.871	ENSPTRG00000019511	SRRT	99	93.373	Pan_troglodytes
ENSCAPG00000013586	SRRT	100	95.136	ENSPANG00000020763	SRRT	97	95.136	Papio_anubis
ENSCAPG00000013586	SRRT	98	66.949	ENSPKIG00000022212	-	95	66.747	Paramormyrops_kingsleyae
ENSCAPG00000013586	SRRT	100	68.616	ENSPKIG00000005434	srrt	54	78.788	Paramormyrops_kingsleyae
ENSCAPG00000013586	SRRT	100	79.567	ENSPSIG00000016311	SRRT	95	80.288	Pelodiscus_sinensis
ENSCAPG00000013586	SRRT	89	70.638	ENSPMGG00000002841	srrt	56	74.187	Periophthalmus_magnuspinnatus
ENSCAPG00000013586	SRRT	100	95.990	ENSPEMG00000010834	Srrt	95	95.990	Peromyscus_maniculatus_bairdii
ENSCAPG00000013586	SRRT	98	57.634	ENSPMAG00000009614	-	55	64.076	Petromyzon_marinus
ENSCAPG00000013586	SRRT	100	89.048	ENSPCIG00000000816	SRRT	95	86.905	Phascolarctos_cinereus
ENSCAPG00000013586	SRRT	97	54.187	ENSPFOG00000016554	-	54	62.338	Poecilia_formosa
ENSCAPG00000013586	SRRT	89	70.526	ENSPFOG00000005704	srrt	51	75.658	Poecilia_formosa
ENSCAPG00000013586	SRRT	97	53.951	ENSPLAG00000004526	-	55	61.987	Poecilia_latipinna
ENSCAPG00000013586	SRRT	99	63.446	ENSPLAG00000021992	srrt	51	75.385	Poecilia_latipinna
ENSCAPG00000013586	SRRT	94	53.367	ENSPMEG00000001520	-	53	61.327	Poecilia_mexicana
ENSCAPG00000013586	SRRT	89	70.105	ENSPMEG00000001182	srrt	84	74.836	Poecilia_mexicana
ENSCAPG00000013586	SRRT	99	65.376	ENSPREG00000022308	srrt	51	75.658	Poecilia_reticulata
ENSCAPG00000013586	SRRT	100	84.192	ENSPPYG00000017432	SRRT	95	84.671	Pongo_abelii
ENSCAPG00000013586	SRRT	100	90.510	ENSPCAG00000001621	SRRT	95	90.391	Procavia_capensis
ENSCAPG00000013586	SRRT	100	96.168	ENSPCOG00000025751	SRRT	95	96.168	Propithecus_coquereli
ENSCAPG00000013586	SRRT	100	89.038	ENSPVAG00000000834	SRRT	100	87.794	Pteropus_vampyrus
ENSCAPG00000013586	SRRT	89	70.253	ENSPNYG00000018710	srrt	52	75.165	Pundamilia_nyererei
ENSCAPG00000013586	SRRT	81	76.000	ENSPNAG00000010629	srrt	84	64.680	Pygocentrus_nattereri
ENSCAPG00000013586	SRRT	91	85.294	ENSRNOG00000048277	AABR07035787.1	93	85.345	Rattus_norvegicus
ENSCAPG00000013586	SRRT	100	96.048	ENSRBIG00000035718	SRRT	97	95.136	Rhinopithecus_bieti
ENSCAPG00000013586	SRRT	100	96.048	ENSRROG00000030622	SRRT	98	95.136	Rhinopithecus_roxellana
ENSCAPG00000013586	SRRT	100	95.928	ENSSBOG00000033570	SRRT	96	96.506	Saimiri_boliviensis_boliviensis
ENSCAPG00000013586	SRRT	93	86.720	ENSSHAG00000007349	-	100	82.047	Sarcophilus_harrisii
ENSCAPG00000013586	SRRT	98	69.467	ENSSFOG00015017293	srrt	95	68.801	Scleropages_formosus
ENSCAPG00000013586	SRRT	89	57.202	ENSSMAG00000018195	-	83	62.661	Scophthalmus_maximus
ENSCAPG00000013586	SRRT	99	64.458	ENSSMAG00000015342	srrt	88	75.771	Scophthalmus_maximus
ENSCAPG00000013586	SRRT	89	70.464	ENSSDUG00000012049	srrt	91	65.325	Seriola_dumerili
ENSCAPG00000013586	SRRT	93	53.469	ENSSDUG00000002051	-	93	55.724	Seriola_dumerili
ENSCAPG00000013586	SRRT	88	75.165	ENSSLDG00000017477	srrt	85	76.264	Seriola_lalandi_dorsalis
ENSCAPG00000013586	SRRT	89	70.650	ENSSPAG00000005665	srrt	51	75.546	Stegastes_partitus
ENSCAPG00000013586	SRRT	89	55.745	ENSSPAG00000018943	-	93	57.516	Stegastes_partitus
ENSCAPG00000013586	SRRT	99	92.987	ENSSSCG00000024789	SRRT	99	92.910	Sus_scrofa
ENSCAPG00000013586	SRRT	100	64.269	ENSTRUG00000016075	srrt	95	64.478	Takifugu_rubripes
ENSCAPG00000013586	SRRT	95	54.499	ENSTRUG00000000023	-	51	60.412	Takifugu_rubripes
ENSCAPG00000013586	SRRT	94	55.378	ENSTNIG00000003111	-	53	61.771	Tetraodon_nigroviridis
ENSCAPG00000013586	SRRT	64	56.772	ENSTNIG00000019765	-	95	63.722	Tetraodon_nigroviridis
ENSCAPG00000013586	SRRT	89	68.958	ENSTNIG00000011779	srrt	72	73.673	Tetraodon_nigroviridis
ENSCAPG00000013586	SRRT	81	90.385	ENSTBEG00000005212	SRRT	60	96.206	Tupaia_belangeri
ENSCAPG00000013586	SRRT	100	95.808	ENSTTRG00000011104	SRRT	95	95.808	Tursiops_truncatus
ENSCAPG00000013586	SRRT	100	96.168	ENSUAMG00000027997	SRRT	98	96.168	Ursus_americanus
ENSCAPG00000013586	SRRT	100	96.168	ENSUMAG00000011295	SRRT	95	96.168	Ursus_maritimus
ENSCAPG00000013586	SRRT	100	96.168	ENSVVUG00000023572	SRRT	95	96.168	Vulpes_vulpes
ENSCAPG00000013586	SRRT	89	70.886	ENSXETG00000025124	srrt	83	75.862	Xenopus_tropicalis
ENSCAPG00000013586	SRRT	89	51.173	ENSXCOG00000013105	-	90	52.298	Xiphophorus_couchianus
ENSCAPG00000013586	SRRT	97	54.455	ENSXMAG00000002090	-	54	62.609	Xiphophorus_maculatus
ENSCAPG00000013586	SRRT	89	70.886	ENSXMAG00000007627	srrt	86	75.658	Xiphophorus_maculatus