EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000013600 (Gene tree)
Gene ID: -
Gene Symbol: RNPC3
Alias: FLJ20008|KIAA1839|RBM40|SNRNP65
Full Name: RNA binding region (RNP1%2C RRM) containing 3
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 21034 bases
Position: chrAVPZ01000223.1:28463030-28484063
Accession: 18666
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000012859	RRM_1	PF00076.22	1.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000016617	RNPC3-201	1254	-	ENSCAPP00000012859	417 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000013600's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000013600's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000013600	RNPC3	99	79.634	ENSG00000185946	RNPC3	99	83.938	Homo_sapiens
ENSCAPG00000013600	RNPC3	97	47.005	ENSAPOG00000017371	rnpc3	86	46.818	Acanthochromis_polyacanthus
ENSCAPG00000013600	RNPC3	99	77.854	ENSAMEG00000001694	RNPC3	84	79.224	Ailuropoda_melanoleuca
ENSCAPG00000013600	RNPC3	97	43.864	ENSACIG00000021043	rnpc3	85	44.064	Amphilophus_citrinellus
ENSCAPG00000013600	RNPC3	97	46.697	ENSAOCG00000014052	rnpc3	84	46.517	Amphiprion_ocellaris
ENSCAPG00000013600	RNPC3	97	46.469	ENSAPEG00000008739	rnpc3	84	46.292	Amphiprion_percula
ENSCAPG00000013600	RNPC3	97	46.501	ENSATEG00000021263	rnpc3	86	46.325	Anabas_testudineus
ENSCAPG00000013600	RNPC3	97	59.688	ENSAPLG00000015605	RNPC3	96	63.387	Anas_platyrhynchos
ENSCAPG00000013600	RNPC3	97	60.373	ENSACAG00000002029	RNPC3	84	61.149	Anolis_carolinensis
ENSCAPG00000013600	RNPC3	99	78.719	ENSANAG00000019950	RNPC3	84	79.863	Aotus_nancymaae
ENSCAPG00000013600	RNPC3	97	44.671	ENSACLG00000014702	rnpc3	85	44.494	Astatotilapia_calliptera
ENSCAPG00000013600	RNPC3	97	48.753	ENSAMXG00000033372	rnpc3	86	48.190	Astyanax_mexicanus
ENSCAPG00000013600	RNPC3	99	77.803	ENSBTAG00000019091	RNPC3	84	78.947	Bos_taurus
ENSCAPG00000013600	RNPC3	97	82.567	ENSCJAG00000035686	RNPC3	84	81.948	Callithrix_jacchus
ENSCAPG00000013600	RNPC3	99	77.346	ENSCAFG00000019972	RNPC3	84	78.490	Canis_familiaris
ENSCAPG00000013600	RNPC3	99	77.574	ENSCAFG00020011300	RNPC3	84	78.719	Canis_lupus_dingo
ENSCAPG00000013600	RNPC3	99	78.261	ENSCHIG00000020361	RNPC3	84	78.719	Capra_hircus
ENSCAPG00000013600	RNPC3	99	77.574	ENSTSYG00000030256	RNPC3	84	78.719	Carlito_syrichta
ENSCAPG00000013600	RNPC3	97	87.646	ENSCPOG00000031638	RNPC3	84	87.816	Cavia_porcellus
ENSCAPG00000013600	RNPC3	99	78.947	ENSCCAG00000024301	RNPC3	84	80.092	Cebus_capucinus
ENSCAPG00000013600	RNPC3	99	79.176	ENSCATG00000002086	RNPC3	84	80.320	Cercocebus_atys
ENSCAPG00000013600	RNPC3	91	70.103	ENSCATG00000035930	-	85	69.750	Cercocebus_atys
ENSCAPG00000013600	RNPC3	97	83.256	ENSCLAG00000005169	RNPC3	84	83.945	Chinchilla_lanigera
ENSCAPG00000013600	RNPC3	99	78.947	ENSCSAG00000001519	RNPC3	84	80.092	Chlorocebus_sabaeus
ENSCAPG00000013600	RNPC3	97	59.152	ENSCPBG00000028311	RNPC3	84	62.415	Chrysemys_picta_bellii
ENSCAPG00000013600	RNPC3	99	36.054	ENSCING00000021276	-	88	36.054	Ciona_intestinalis
ENSCAPG00000013600	RNPC3	99	35.225	ENSCSAVG00000002800	-	89	35.071	Ciona_savignyi
ENSCAPG00000013600	RNPC3	99	79.405	ENSCANG00000031444	RNPC3	84	80.549	Colobus_angolensis_palliatus
ENSCAPG00000013600	RNPC3	97	76.690	ENSCGRG00001019276	Rnpc3	84	77.117	Cricetulus_griseus_chok1gshd
ENSCAPG00000013600	RNPC3	97	76.690	ENSCGRG00000000053	Rnpc3	96	77.117	Cricetulus_griseus_crigri
ENSCAPG00000013600	RNPC3	97	46.774	ENSCSEG00000013475	rnpc3	85	47.727	Cynoglossus_semilaevis
ENSCAPG00000013600	RNPC3	97	44.420	ENSCVAG00000002645	rnpc3	86	44.934	Cyprinodon_variegatus
ENSCAPG00000013600	RNPC3	97	49.425	ENSDARG00000011247	rnpc3	88	61.585	Danio_rerio
ENSCAPG00000013600	RNPC3	97	75.168	ENSDNOG00000044555	-	84	78.391	Dasypus_novemcinctus
ENSCAPG00000013600	RNPC3	97	74.497	ENSDNOG00000047498	-	84	77.701	Dasypus_novemcinctus
ENSCAPG00000013600	RNPC3	99	76.659	ENSDORG00000027343	Rnpc3	84	77.803	Dipodomys_ordii
ENSCAPG00000013600	RNPC3	99	42.174	ENSEBUG00000002068	rnpc3	86	42.888	Eptatretus_burgeri
ENSCAPG00000013600	RNPC3	97	77.958	ENSEASG00005015957	RNPC3	84	78.261	Equus_asinus_asinus
ENSCAPG00000013600	RNPC3	97	78.654	ENSECAG00000021148	RNPC3	84	78.947	Equus_caballus
ENSCAPG00000013600	RNPC3	99	45.336	ENSELUG00000002264	rnpc3	87	46.868	Esox_lucius
ENSCAPG00000013600	RNPC3	100	78.507	ENSFCAG00000024312	RNPC3	84	79.405	Felis_catus
ENSCAPG00000013600	RNPC3	97	63.341	ENSFALG00000002580	RNPC3	91	71.134	Ficedula_albicollis
ENSCAPG00000013600	RNPC3	97	81.903	ENSFDAG00000019948	RNPC3	84	81.922	Fukomys_damarensis
ENSCAPG00000013600	RNPC3	97	41.839	ENSFHEG00000020647	rnpc3	85	43.018	Fundulus_heteroclitus
ENSCAPG00000013600	RNPC3	97	47.222	ENSGMOG00000019213	rnpc3	84	47.489	Gadus_morhua
ENSCAPG00000013600	RNPC3	97	63.573	ENSGALG00000005162	RNPC3	78	64.073	Gallus_gallus
ENSCAPG00000013600	RNPC3	97	44.118	ENSGAFG00000017236	rnpc3	86	43.919	Gambusia_affinis
ENSCAPG00000013600	RNPC3	97	46.774	ENSGACG00000002048	rnpc3	86	46.239	Gasterosteus_aculeatus
ENSCAPG00000013600	RNPC3	97	59.821	ENSGAGG00000008438	RNPC3	84	62.870	Gopherus_agassizii
ENSCAPG00000013600	RNPC3	99	65.753	ENSGGOG00000026201	-	85	67.727	Gorilla_gorilla
ENSCAPG00000013600	RNPC3	78	45.481	ENSHBUG00000015966	rnpc3	72	44.789	Haplochromis_burtoni
ENSCAPG00000013600	RNPC3	97	78.747	ENSHGLG00000001708	RNPC3	84	81.839	Heterocephalus_glaber_female
ENSCAPG00000013600	RNPC3	97	78.747	ENSHGLG00100003005	RNPC3	84	81.839	Heterocephalus_glaber_male
ENSCAPG00000013600	RNPC3	97	46.469	ENSHCOG00000017135	rnpc3	86	46.292	Hippocampus_comes
ENSCAPG00000013600	RNPC3	97	49.083	ENSIPUG00000002916	rnpc3	85	49.321	Ictalurus_punctatus
ENSCAPG00000013600	RNPC3	97	79.814	ENSSTOG00000025020	RNPC3	84	79.863	Ictidomys_tridecemlineatus
ENSCAPG00000013600	RNPC3	97	75.174	ENSJJAG00000010203	Rnpc3	85	75.286	Jaculus_jaculus
ENSCAPG00000013600	RNPC3	58	50.000	ENSKMAG00000017358	rnpc3	86	46.991	Kryptolebias_marmoratus
ENSCAPG00000013600	RNPC3	97	46.313	ENSLBEG00000024901	rnpc3	84	46.364	Labrus_bergylta
ENSCAPG00000013600	RNPC3	97	55.093	ENSLACG00000005720	RNPC3	79	56.250	Latimeria_chalumnae
ENSCAPG00000013600	RNPC3	97	51.168	ENSLOCG00000007986	rnpc3	86	51.613	Lepisosteus_oculatus
ENSCAPG00000013600	RNPC3	99	76.201	ENSLAFG00000032342	RNPC3	84	77.117	Loxodonta_africana
ENSCAPG00000013600	RNPC3	99	78.947	ENSMFAG00000002004	RNPC3	84	80.092	Macaca_fascicularis
ENSCAPG00000013600	RNPC3	91	66.414	ENSMFAG00000002917	-	84	67.164	Macaca_fascicularis
ENSCAPG00000013600	RNPC3	99	78.947	ENSMMUG00000018039	RNPC3	84	80.092	Macaca_mulatta
ENSCAPG00000013600	RNPC3	77	82.143	ENSMMUG00000002098	-	83	61.667	Macaca_mulatta
ENSCAPG00000013600	RNPC3	99	73.227	ENSMNEG00000033950	RNPC3	83	74.371	Macaca_nemestrina
ENSCAPG00000013600	RNPC3	85	68.044	ENSMNEG00000029209	-	84	68.146	Macaca_nemestrina
ENSCAPG00000013600	RNPC3	91	68.922	ENSMLEG00000034644	-	85	68.873	Mandrillus_leucophaeus
ENSCAPG00000013600	RNPC3	99	79.176	ENSMLEG00000033628	RNPC3	84	80.320	Mandrillus_leucophaeus
ENSCAPG00000013600	RNPC3	99	45.045	ENSMAMG00000007496	rnpc3	86	44.719	Mastacembelus_armatus
ENSCAPG00000013600	RNPC3	97	44.295	ENSMZEG00005020233	rnpc3	86	44.124	Maylandia_zebra
ENSCAPG00000013600	RNPC3	97	63.073	ENSMGAG00000006381	RNPC3	96	64.253	Meleagris_gallopavo
ENSCAPG00000013600	RNPC3	97	76.923	ENSMAUG00000001358	Rnpc3	84	77.346	Mesocricetus_auratus
ENSCAPG00000013600	RNPC3	99	79.863	ENSMICG00000029591	RNPC3	84	80.778	Microcebus_murinus
ENSCAPG00000013600	RNPC3	97	75.991	ENSMOCG00000013423	Rnpc3	84	76.322	Microtus_ochrogaster
ENSCAPG00000013600	RNPC3	99	45.161	ENSMMOG00000005309	rnpc3	85	44.921	Mola_mola
ENSCAPG00000013600	RNPC3	97	68.531	ENSMODG00000002946	RNPC3	84	68.349	Monodelphis_domestica
ENSCAPG00000013600	RNPC3	97	44.773	ENSMALG00000015471	rnpc3	86	44.719	Monopterus_albus
ENSCAPG00000013600	RNPC3	98	74.478	MGP_CAROLIEiJ_G0025555	Rnpc3	85	75.286	Mus_caroli
ENSCAPG00000013600	RNPC3	98	74.942	ENSMUSG00000027981	Rnpc3	94	75.744	Mus_musculus
ENSCAPG00000013600	RNPC3	98	75.174	MGP_PahariEiJ_G0027001	Rnpc3	85	75.973	Mus_pahari
ENSCAPG00000013600	RNPC3	98	75.638	MGP_SPRETEiJ_G0026505	Rnpc3	85	75.283	Mus_spretus
ENSCAPG00000013600	RNPC3	99	76.659	ENSMPUG00000007349	RNPC3	84	78.032	Mustela_putorius_furo
ENSCAPG00000013600	RNPC3	97	73.154	ENSMLUG00000028743	RNPC3	84	76.092	Myotis_lucifugus
ENSCAPG00000013600	RNPC3	97	77.494	ENSNGAG00000010939	Rnpc3	84	77.803	Nannospalax_galili
ENSCAPG00000013600	RNPC3	97	44.444	ENSNBRG00000012196	rnpc3	83	44.270	Neolamprologus_brichardi
ENSCAPG00000013600	RNPC3	99	79.176	ENSNLEG00000012013	RNPC3	84	80.320	Nomascus_leucogenys
ENSCAPG00000013600	RNPC3	97	82.051	ENSODEG00000007612	RNPC3	84	82.069	Octodon_degus
ENSCAPG00000013600	RNPC3	97	45.872	ENSONIG00000004770	rnpc3	89	45.516	Oreochromis_niloticus
ENSCAPG00000013600	RNPC3	97	67.674	ENSOANG00000008220	RNPC3	93	67.431	Ornithorhynchus_anatinus
ENSCAPG00000013600	RNPC3	97	79.582	ENSOCUG00000004016	RNPC3	84	78.815	Oryctolagus_cuniculus
ENSCAPG00000013600	RNPC3	97	47.113	ENSORLG00000005694	rnpc3	86	46.697	Oryzias_latipes
ENSCAPG00000013600	RNPC3	97	47.454	ENSORLG00020005513	rnpc3	86	47.032	Oryzias_latipes_hni
ENSCAPG00000013600	RNPC3	97	47.454	ENSORLG00015002179	rnpc3	86	47.032	Oryzias_latipes_hsok
ENSCAPG00000013600	RNPC3	97	46.882	ENSOMEG00000017737	rnpc3	86	47.836	Oryzias_melastigma
ENSCAPG00000013600	RNPC3	99	78.719	ENSOGAG00000026182	RNPC3	84	79.634	Otolemur_garnettii
ENSCAPG00000013600	RNPC3	99	78.032	ENSOARG00000018719	RNPC3	84	78.490	Ovis_aries
ENSCAPG00000013600	RNPC3	99	66.210	ENSPPAG00000030278	-	85	68.182	Pan_paniscus
ENSCAPG00000013600	RNPC3	99	79.452	ENSPPAG00000037459	RNPC3	84	80.594	Pan_paniscus
ENSCAPG00000013600	RNPC3	99	78.261	ENSPPRG00000020246	RNPC3	84	79.405	Panthera_pardus
ENSCAPG00000013600	RNPC3	99	78.261	ENSPTIG00000009887	RNPC3	86	79.405	Panthera_tigris_altaica
ENSCAPG00000013600	RNPC3	99	79.405	ENSPTRG00000033902	RNPC3	84	80.549	Pan_troglodytes
ENSCAPG00000013600	RNPC3	99	65.982	ENSPTRG00000044227	-	87	67.580	Pan_troglodytes
ENSCAPG00000013600	RNPC3	99	79.176	ENSPANG00000012137	RNPC3	84	80.320	Papio_anubis
ENSCAPG00000013600	RNPC3	95	66.667	ENSPANG00000029957	-	89	66.825	Papio_anubis
ENSCAPG00000013600	RNPC3	97	45.270	ENSPKIG00000008828	rnpc3	84	46.911	Paramormyrops_kingsleyae
ENSCAPG00000013600	RNPC3	70	59.236	ENSPSIG00000007396	RNPC3	97	60.372	Pelodiscus_sinensis
ENSCAPG00000013600	RNPC3	97	45.370	ENSPMGG00000011742	rnpc3	85	45.995	Periophthalmus_magnuspinnatus
ENSCAPG00000013600	RNPC3	97	76.457	ENSPEMG00000020112	Rnpc3	96	76.888	Peromyscus_maniculatus_bairdii
ENSCAPG00000013600	RNPC3	60	43.529	ENSPMAG00000003778	rnpc3	86	41.649	Petromyzon_marinus
ENSCAPG00000013600	RNPC3	97	68.445	ENSPCIG00000004415	-	84	68.349	Phascolarctos_cinereus
ENSCAPG00000013600	RNPC3	97	43.864	ENSPFOG00000009895	rnpc3	86	43.665	Poecilia_formosa
ENSCAPG00000013600	RNPC3	97	43.807	ENSPLAG00000012023	rnpc3	86	43.665	Poecilia_latipinna
ENSCAPG00000013600	RNPC3	97	44.091	ENSPMEG00000003663	rnpc3	86	43.891	Poecilia_mexicana
ENSCAPG00000013600	RNPC3	97	43.578	ENSPREG00000010206	rnpc3	86	43.439	Poecilia_reticulata
ENSCAPG00000013600	RNPC3	82	73.842	ENSPPYG00000001102	RNPC3	83	75.204	Pongo_abelii
ENSCAPG00000013600	RNPC3	97	44.444	ENSPNYG00000020603	rnpc3	85	44.270	Pundamilia_nyererei
ENSCAPG00000013600	RNPC3	97	46.774	ENSPNAG00000000524	rnpc3	77	47.738	Pygocentrus_nattereri
ENSCAPG00000013600	RNPC3	97	72.036	ENSRNOG00000017310	Rnpc3	84	75.402	Rattus_norvegicus
ENSCAPG00000013600	RNPC3	99	73.288	ENSRBIG00000043897	RNPC3	83	74.201	Rhinopithecus_bieti
ENSCAPG00000013600	RNPC3	99	79.634	ENSRROG00000032334	RNPC3	84	80.778	Rhinopithecus_roxellana
ENSCAPG00000013600	RNPC3	97	79.350	ENSSBOG00000024473	RNPC3	84	79.634	Saimiri_boliviensis_boliviensis
ENSCAPG00000013600	RNPC3	97	68.213	ENSSHAG00000011859	RNPC3	84	67.890	Sarcophilus_harrisii
ENSCAPG00000013600	RNPC3	97	51.501	ENSSFOG00015013055	rnpc3	87	50.670	Scleropages_formosus
ENSCAPG00000013600	RNPC3	99	44.519	ENSSMAG00000020346	rnpc3	86	45.190	Scophthalmus_maximus
ENSCAPG00000013600	RNPC3	97	45.946	ENSSDUG00000006600	rnpc3	86	46.205	Seriola_dumerili
ENSCAPG00000013600	RNPC3	97	46.380	ENSSLDG00000007979	rnpc3	86	45.982	Seriola_lalandi_dorsalis
ENSCAPG00000013600	RNPC3	97	62.645	ENSSPUG00000008539	-	83	63.158	Sphenodon_punctatus
ENSCAPG00000013600	RNPC3	97	57.077	ENSSPUG00000003872	-	81	57.306	Sphenodon_punctatus
ENSCAPG00000013600	RNPC3	58	51.429	ENSSPAG00000005633	rnpc3	85	47.209	Stegastes_partitus
ENSCAPG00000013600	RNPC3	97	78.788	ENSSSCG00000037254	RNPC3	84	79.080	Sus_scrofa
ENSCAPG00000013600	RNPC3	97	62.558	ENSTGUG00000004795	-	96	62.844	Taeniopygia_guttata
ENSCAPG00000013600	RNPC3	99	46.171	ENSTNIG00000018963	rnpc3	86	46.396	Tetraodon_nigroviridis
ENSCAPG00000013600	RNPC3	99	78.261	ENSUMAG00000007775	RNPC3	86	79.634	Ursus_maritimus
ENSCAPG00000013600	RNPC3	99	77.574	ENSVVUG00000000331	RNPC3	84	78.719	Vulpes_vulpes
ENSCAPG00000013600	RNPC3	97	48.853	ENSXETG00000025027	rnpc3	84	48.853	Xenopus_tropicalis
ENSCAPG00000013600	RNPC3	58	50.407	ENSXCOG00000005013	rnpc3	86	43.640	Xiphophorus_couchianus
ENSCAPG00000013600	RNPC3	97	44.570	ENSXMAG00000006495	rnpc3	86	44.595	Xiphophorus_maculatus