EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAPG00000013621 (Gene tree)
Gene ID: -
Gene Symbol: DDX42
Alias: RHELP|RNAHP|SF3B8|SF3b125
Full Name: DEAD-box helicase 42
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 32103 bases
Position: chrAVPZ01000622.1:4898258-4930360
Accession: 18676
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000012866	DEAD	PF00270.29	1.6e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000016624	DDX42-201	1839	-	ENSCAPP00000012866	612 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000013621's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000013621's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAPG00000013621	DDX42	52	32.398	ENSCAPG00000010945	-	59	32.398
ENSCAPG00000013621	DDX42	59	33.820	ENSCAPG00000004247	-	88	34.307
ENSCAPG00000013621	DDX42	53	33.247	ENSCAPG00000011375	DDX41	51	43.478

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000013621	DDX42	94	75.740	ENSG00000198231	DDX42	95	75.857	Homo_sapiens
ENSCAPG00000013621	DDX42	88	63.807	ENSAPOG00000017675	ddx42	71	63.807	Acanthochromis_polyacanthus
ENSCAPG00000013621	DDX42	94	75.740	ENSAMEG00000003200	DDX42	72	75.740	Ailuropoda_melanoleuca
ENSCAPG00000013621	DDX42	88	62.791	ENSACIG00000007376	ddx42	83	62.791	Amphilophus_citrinellus
ENSCAPG00000013621	DDX42	88	63.199	ENSAOCG00000003520	ddx42	70	63.199	Amphiprion_ocellaris
ENSCAPG00000013621	DDX42	88	63.396	ENSAPEG00000000984	ddx42	70	63.396	Amphiprion_percula
ENSCAPG00000013621	DDX42	88	62.229	ENSATEG00000022920	ddx42	70	62.133	Anabas_testudineus
ENSCAPG00000013621	DDX42	94	70.631	ENSAPLG00000010544	DDX42	73	70.778	Anas_platyrhynchos
ENSCAPG00000013621	DDX42	94	68.778	ENSACAG00000003994	DDX42	72	68.778	Anolis_carolinensis
ENSCAPG00000013621	DDX42	94	75.704	ENSANAG00000035693	DDX42	95	75.704	Aotus_nancymaae
ENSCAPG00000013621	DDX42	94	60.997	ENSACLG00000025113	ddx42	73	60.997	Astatotilapia_calliptera
ENSCAPG00000013621	DDX42	83	64.474	ENSAMXG00000011435	ddx42	73	59.490	Astyanax_mexicanus
ENSCAPG00000013621	DDX42	94	74.629	ENSBTAG00000021058	DDX42	94	74.629	Bos_taurus
ENSCAPG00000013621	DDX42	68	47.695	WBGene00008119	C46F11.4	60	46.721	Caenorhabditis_elegans
ENSCAPG00000013621	DDX42	94	76.000	ENSCJAG00000019649	DDX42	94	76.000	Callithrix_jacchus
ENSCAPG00000013621	DDX42	94	75.740	ENSCAFG00000012818	DDX42	72	75.740	Canis_familiaris
ENSCAPG00000013621	DDX42	94	75.888	ENSCAFG00020026631	DDX42	72	75.888	Canis_lupus_dingo
ENSCAPG00000013621	DDX42	94	75.664	ENSCHIG00000014431	DDX42	75	75.664	Capra_hircus
ENSCAPG00000013621	DDX42	94	75.480	ENSTSYG00000001380	DDX42	90	70.925	Carlito_syrichta
ENSCAPG00000013621	DDX42	94	77.959	ENSCPOG00000005633	DDX42	73	77.959	Cavia_porcellus
ENSCAPG00000013621	DDX42	97	75.145	ENSCCAG00000020612	DDX42	97	75.145	Cebus_capucinus
ENSCAPG00000013621	DDX42	94	75.444	ENSCATG00000030490	DDX42	88	75.407	Cercocebus_atys
ENSCAPG00000013621	DDX42	94	77.548	ENSCLAG00000003497	DDX42	73	77.548	Chinchilla_lanigera
ENSCAPG00000013621	DDX42	94	74.743	ENSCSAG00000003914	DDX42	72	74.743	Chlorocebus_sabaeus
ENSCAPG00000013621	DDX42	94	69.913	ENSCPBG00000026682	DDX42	72	69.913	Chrysemys_picta_bellii
ENSCAPG00000013621	DDX42	62	54.545	ENSCING00000001837	-	96	54.545	Ciona_intestinalis
ENSCAPG00000013621	DDX42	52	60.274	ENSCSAVG00000002180	-	96	60.274	Ciona_savignyi
ENSCAPG00000013621	DDX42	96	75.073	ENSCANG00000034663	DDX42	96	75.708	Colobus_angolensis_palliatus
ENSCAPG00000013621	DDX42	94	75.628	ENSCGRG00001009775	Ddx42	73	75.628	Cricetulus_griseus_chok1gshd
ENSCAPG00000013621	DDX42	94	75.628	ENSCGRG00000011718	Ddx42	73	75.628	Cricetulus_griseus_crigri
ENSCAPG00000013621	DDX42	94	59.795	ENSCSEG00000021574	ddx42	70	62.617	Cynoglossus_semilaevis
ENSCAPG00000013621	DDX42	94	60.530	ENSCVAG00000011404	ddx42	74	60.561	Cyprinodon_variegatus
ENSCAPG00000013621	DDX42	83	62.378	ENSDARG00000037928	ddx42	74	59.483	Danio_rerio
ENSCAPG00000013621	DDX42	94	67.794	ENSDNOG00000007961	DDX42	72	67.794	Dasypus_novemcinctus
ENSCAPG00000013621	DDX42	94	70.674	ENSDORG00000004199	Ddx42	76	70.674	Dipodomys_ordii
ENSCAPG00000013621	DDX42	77	46.612	FBgn0036104	CG6418	79	46.302	Drosophila_melanogaster
ENSCAPG00000013621	DDX42	82	58.581	ENSEBUG00000001155	ddx42	74	58.581	Eptatretus_burgeri
ENSCAPG00000013621	DDX42	94	76.366	ENSEASG00005013089	DDX42	96	76.296	Equus_asinus_asinus
ENSCAPG00000013621	DDX42	94	76.366	ENSECAG00000022684	DDX42	72	76.366	Equus_caballus
ENSCAPG00000013621	DDX42	94	59.416	ENSELUG00000020593	ddx42	73	59.329	Esox_lucius
ENSCAPG00000013621	DDX42	97	77.011	ENSFCAG00000003499	DDX42	86	77.011	Felis_catus
ENSCAPG00000013621	DDX42	94	69.424	ENSFALG00000004675	DDX42	59	69.424	Ficedula_albicollis
ENSCAPG00000013621	DDX42	94	76.957	ENSFDAG00000020516	DDX42	73	76.957	Fukomys_damarensis
ENSCAPG00000013621	DDX42	93	59.587	ENSFHEG00000023290	ddx42	74	59.587	Fundulus_heteroclitus
ENSCAPG00000013621	DDX42	75	59.397	ENSGMOG00000004595	ddx42	63	59.397	Gadus_morhua
ENSCAPG00000013621	DDX42	95	68.097	ENSGALG00000000581	DDX42	74	68.956	Gallus_gallus
ENSCAPG00000013621	DDX42	91	60.486	ENSGAFG00000011846	ddx42	70	62.166	Gambusia_affinis
ENSCAPG00000013621	DDX42	88	57.321	ENSGACG00000009782	ddx42	73	57.430	Gasterosteus_aculeatus
ENSCAPG00000013621	DDX42	94	70.219	ENSGAGG00000024411	DDX42	72	70.219	Gopherus_agassizii
ENSCAPG00000013621	DDX42	94	75.852	ENSGGOG00000006779	DDX42	94	75.852	Gorilla_gorilla
ENSCAPG00000013621	DDX42	94	60.940	ENSHBUG00000008705	ddx42	73	60.940	Haplochromis_burtoni
ENSCAPG00000013621	DDX42	89	74.498	ENSHGLG00000010024	DDX42	73	74.498	Heterocephalus_glaber_female
ENSCAPG00000013621	DDX42	94	63.281	ENSHGLG00100007138	-	71	63.158	Heterocephalus_glaber_male
ENSCAPG00000013621	DDX42	94	76.809	ENSHGLG00100004479	-	72	76.809	Heterocephalus_glaber_male
ENSCAPG00000013621	DDX42	90	61.963	ENSHCOG00000003357	ddx42	95	58.295	Hippocampus_comes
ENSCAPG00000013621	DDX42	82	63.411	ENSIPUG00000013327	ddx42	77	58.952	Ictalurus_punctatus
ENSCAPG00000013621	DDX42	94	76.106	ENSSTOG00000008922	DDX42	73	76.106	Ictidomys_tridecemlineatus
ENSCAPG00000013621	DDX42	94	74.889	ENSJJAG00000011727	Ddx42	73	74.889	Jaculus_jaculus
ENSCAPG00000013621	DDX42	87	63.371	ENSKMAG00000009914	ddx42	74	60.763	Kryptolebias_marmoratus
ENSCAPG00000013621	DDX42	82	60.732	ENSLBEG00000004687	ddx42	69	60.601	Labrus_bergylta
ENSCAPG00000013621	DDX42	87	65.348	ENSLACG00000013476	DDX42	72	63.663	Latimeria_chalumnae
ENSCAPG00000013621	DDX42	93	63.731	ENSLOCG00000011764	ddx42	73	63.636	Lepisosteus_oculatus
ENSCAPG00000013621	DDX42	94	75.480	ENSLAFG00000003249	DDX42	73	75.480	Loxodonta_africana
ENSCAPG00000013621	DDX42	94	75.592	ENSMFAG00000031356	DDX42	88	75.556	Macaca_fascicularis
ENSCAPG00000013621	DDX42	96	75.073	ENSMMUG00000016762	DDX42	95	75.073	Macaca_mulatta
ENSCAPG00000013621	DDX42	94	75.592	ENSMNEG00000038250	DDX42	89	75.556	Macaca_nemestrina
ENSCAPG00000013621	DDX42	94	75.592	ENSMLEG00000043080	DDX42	88	72.754	Mandrillus_leucophaeus
ENSCAPG00000013621	DDX42	88	63.396	ENSMAMG00000021888	ddx42	68	63.396	Mastacembelus_armatus
ENSCAPG00000013621	DDX42	94	60.997	ENSMZEG00005023103	ddx42	73	60.997	Maylandia_zebra
ENSCAPG00000013621	DDX42	95	69.242	ENSMGAG00000001822	DDX42	74	69.528	Meleagris_gallopavo
ENSCAPG00000013621	DDX42	94	75.628	ENSMAUG00000020774	-	91	75.628	Mesocricetus_auratus
ENSCAPG00000013621	DDX42	94	75.740	ENSMICG00000009952	DDX42	73	75.740	Microcebus_murinus
ENSCAPG00000013621	DDX42	94	75.185	ENSMOCG00000015504	Ddx42	73	75.185	Microtus_ochrogaster
ENSCAPG00000013621	DDX42	87	64.332	ENSMMOG00000016963	ddx42	66	63.889	Mola_mola
ENSCAPG00000013621	DDX42	88	62.617	ENSMALG00000007800	ddx42	71	63.084	Monopterus_albus
ENSCAPG00000013621	DDX42	94	75.628	MGP_CAROLIEiJ_G0017314	Ddx42	73	75.628	Mus_caroli
ENSCAPG00000013621	DDX42	94	75.628	ENSMUSG00000020705	Ddx42	73	75.628	Mus_musculus
ENSCAPG00000013621	DDX42	70	75.098	MGP_PahariEiJ_G0018444	-	72	75.098	Mus_pahari
ENSCAPG00000013621	DDX42	94	75.628	MGP_SPRETEiJ_G0018158	Ddx42	73	75.628	Mus_spretus
ENSCAPG00000013621	DDX42	94	76.183	ENSMPUG00000014921	DDX42	72	76.183	Mustela_putorius_furo
ENSCAPG00000013621	DDX42	94	75.480	ENSMLUG00000011645	DDX42	71	75.480	Myotis_lucifugus
ENSCAPG00000013621	DDX42	94	75.628	ENSNGAG00000021897	Ddx42	73	75.628	Nannospalax_galili
ENSCAPG00000013621	DDX42	92	60.479	ENSNBRG00000004466	ddx42	73	60.479	Neolamprologus_brichardi
ENSCAPG00000013621	DDX42	94	75.704	ENSNLEG00000004248	DDX42	96	75.704	Nomascus_leucogenys
ENSCAPG00000013621	DDX42	75	56.863	ENSMEUG00000013227	-	55	79.866	Notamacropus_eugenii
ENSCAPG00000013621	DDX42	94	75.037	ENSOPRG00000014960	DDX42	72	75.037	Ochotona_princeps
ENSCAPG00000013621	DDX42	94	75.422	ENSODEG00000007810	DDX42	72	75.422	Octodon_degus
ENSCAPG00000013621	DDX42	94	61.054	ENSONIG00000000734	ddx42	73	61.054	Oreochromis_niloticus
ENSCAPG00000013621	DDX42	70	68.824	ENSOANG00000000265	DDX42	95	68.824	Ornithorhynchus_anatinus
ENSCAPG00000013621	DDX42	94	74.742	ENSOCUG00000004304	DDX42	67	74.742	Oryctolagus_cuniculus
ENSCAPG00000013621	DDX42	86	63.133	ENSORLG00000002395	ddx42	73	61.231	Oryzias_latipes
ENSCAPG00000013621	DDX42	86	63.133	ENSORLG00020011621	ddx42	73	61.256	Oryzias_latipes_hni
ENSCAPG00000013621	DDX42	86	63.291	ENSORLG00015004487	ddx42	74	60.850	Oryzias_latipes_hsok
ENSCAPG00000013621	DDX42	86	63.091	ENSOMEG00000020093	ddx42	70	63.108	Oryzias_melastigma
ENSCAPG00000013621	DDX42	94	75.740	ENSOGAG00000006872	DDX42	72	75.740	Otolemur_garnettii
ENSCAPG00000013621	DDX42	94	75.516	ENSOARG00000013540	DDX42	72	75.516	Ovis_aries
ENSCAPG00000013621	DDX42	94	75.704	ENSPPAG00000007496	DDX42	95	75.704	Pan_paniscus
ENSCAPG00000013621	DDX42	94	76.366	ENSPPRG00000002740	DDX42	72	76.366	Panthera_pardus
ENSCAPG00000013621	DDX42	94	76.366	ENSPTIG00000009932	DDX42	72	76.366	Panthera_tigris_altaica
ENSCAPG00000013621	DDX42	94	75.704	ENSPTRG00000009523	DDX42	95	75.704	Pan_troglodytes
ENSCAPG00000013621	DDX42	94	75.592	ENSPANG00000020990	DDX42	89	75.592	Papio_anubis
ENSCAPG00000013621	DDX42	82	64.191	ENSPKIG00000002901	ddx42	75	61.705	Paramormyrops_kingsleyae
ENSCAPG00000013621	DDX42	91	71.104	ENSPSIG00000010289	DDX42	81	71.108	Pelodiscus_sinensis
ENSCAPG00000013621	DDX42	92	60.182	ENSPMGG00000009323	ddx42	71	62.520	Periophthalmus_magnuspinnatus
ENSCAPG00000013621	DDX42	94	76.071	ENSPEMG00000006755	Ddx42	73	76.071	Peromyscus_maniculatus_bairdii
ENSCAPG00000013621	DDX42	82	57.377	ENSPMAG00000005580	ddx42	81	58.033	Petromyzon_marinus
ENSCAPG00000013621	DDX42	94	73.049	ENSPCIG00000009093	DDX42	72	73.343	Phascolarctos_cinereus
ENSCAPG00000013621	DDX42	87	63.166	ENSPFOG00000014104	ddx42	68	63.166	Poecilia_formosa
ENSCAPG00000013621	DDX42	87	63.009	ENSPLAG00000010522	ddx42	68	63.312	Poecilia_latipinna
ENSCAPG00000013621	DDX42	87	63.009	ENSPMEG00000010744	ddx42	68	63.009	Poecilia_mexicana
ENSCAPG00000013621	DDX42	93	60.444	ENSPREG00000009926	ddx42	67	62.794	Poecilia_reticulata
ENSCAPG00000013621	DDX42	94	73.235	ENSPPYG00000008531	DDX42	72	73.235	Pongo_abelii
ENSCAPG00000013621	DDX42	92	70.331	ENSPCAG00000002474	DDX42	77	70.287	Procavia_capensis
ENSCAPG00000013621	DDX42	94	72.118	ENSPCOG00000001559	DDX42	96	70.898	Propithecus_coquereli
ENSCAPG00000013621	DDX42	94	73.412	ENSPVAG00000000160	DDX42	72	73.412	Pteropus_vampyrus
ENSCAPG00000013621	DDX42	97	58.239	ENSPNYG00000013954	ddx42	87	58.239	Pundamilia_nyererei
ENSCAPG00000013621	DDX42	82	64.120	ENSPNAG00000017352	ddx42	87	56.278	Pygocentrus_nattereri
ENSCAPG00000013621	DDX42	94	75.480	ENSRNOG00000009474	Ddx42	73	75.480	Rattus_norvegicus
ENSCAPG00000013621	DDX42	94	75.592	ENSRBIG00000004781	DDX42	96	75.708	Rhinopithecus_bieti
ENSCAPG00000013621	DDX42	94	75.592	ENSRROG00000029794	DDX42	83	75.592	Rhinopithecus_roxellana
ENSCAPG00000013621	DDX42	94	75.852	ENSSBOG00000029624	DDX42	94	75.852	Saimiri_boliviensis_boliviensis
ENSCAPG00000013621	DDX42	94	73.196	ENSSHAG00000012896	-	72	73.490	Sarcophilus_harrisii
ENSCAPG00000013621	DDX42	78	50.185	ENSSHAG00000007919	-	80	50.185	Sarcophilus_harrisii
ENSCAPG00000013621	DDX42	83	64.927	ENSSFOG00015014064	ddx42	67	65.267	Scleropages_formosus
ENSCAPG00000013621	DDX42	87	62.500	ENSSMAG00000009077	ddx42	82	62.197	Scophthalmus_maximus
ENSCAPG00000013621	DDX42	94	60.475	ENSSDUG00000022221	ddx42	74	60.475	Seriola_dumerili
ENSCAPG00000013621	DDX42	94	60.207	ENSSLDG00000018483	ddx42	73	60.207	Seriola_lalandi_dorsalis
ENSCAPG00000013621	DDX42	94	75.148	ENSSARG00000009847	DDX42	72	75.148	Sorex_araneus
ENSCAPG00000013621	DDX42	94	70.398	ENSSPUG00000018806	DDX42	72	70.398	Sphenodon_punctatus
ENSCAPG00000013621	DDX42	88	63.256	ENSSPAG00000013055	ddx42	70	63.256	Stegastes_partitus
ENSCAPG00000013621	DDX42	97	76.724	ENSSSCG00000017289	DDX42	83	76.724	Sus_scrofa
ENSCAPG00000013621	DDX42	93	70.579	ENSTGUG00000001931	DDX42	72	70.579	Taeniopygia_guttata
ENSCAPG00000013621	DDX42	87	61.695	ENSTRUG00000010711	ddx42	65	75.258	Takifugu_rubripes
ENSCAPG00000013621	DDX42	84	72.285	ENSTBEG00000010159	DDX42	81	72.285	Tupaia_belangeri
ENSCAPG00000013621	DDX42	94	75.959	ENSTTRG00000006962	DDX42	73	75.959	Tursiops_truncatus
ENSCAPG00000013621	DDX42	94	75.740	ENSUAMG00000007321	DDX42	72	75.740	Ursus_americanus
ENSCAPG00000013621	DDX42	94	75.740	ENSUMAG00000017438	DDX42	73	75.740	Ursus_maritimus
ENSCAPG00000013621	DDX42	76	80.070	ENSVPAG00000009633	DDX42	53	85.283	Vicugna_pacos
ENSCAPG00000013621	DDX42	94	76.036	ENSVVUG00000006095	DDX42	72	76.036	Vulpes_vulpes
ENSCAPG00000013621	DDX42	94	62.974	ENSXETG00000003245	ddx42	72	62.974	Xenopus_tropicalis
ENSCAPG00000013621	DDX42	96	60.260	ENSXCOG00000017560	ddx42	87	60.260	Xiphophorus_couchianus
ENSCAPG00000013621	DDX42	93	60.593	ENSXMAG00000008138	ddx42	74	60.593	Xiphophorus_maculatus